| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348949
Identifier: 29348949
GI number: 29348949
Start: 4576902
End: 4577609
Strand: Reverse
Name: 29348949
Synonym: BT_3540
Alternate gene names: NA
Gene position: 4577609-4576902 (Counterclockwise)
Preceding gene: 29348958
Following gene: 29348948
Centisome position: 73.12
GC content: 35.17
Gene sequence:
>708_bases ATGATCACAAAAAAGAAAAAATACACTTTGTATTATGTAATGGCATTAGCCTGCGGACTGGTAGCTTCCTTTTTTATTTA TAGTTGTAGCGCAGACGGATATTACTCTGAAGAAATAGAAAAAAACGAGGTAACTAATACACGTGCACTTTCATCAAAAA TGATAAATAATGGAAGCACTCTTATTGATTCCATCGCCAGTTCAGATGAATTTTGGGAATTCGAAATGAGCTCCGAGCTT TTAGCTGATAAGTTTCATGAGTACACTTCTATTTTAAGTGAAGAAGAATATGACAAACTTATGGAAAATCTGAATGATGA TGACTACGTGGAAGACTTCATGAGGAAAGCCAATCTAGAAAATGAACTACAGCAACTGGCAAAAGCTAAAGAAAACCTGA TTAAACATACAAGATTTTTAAGATTAAGCGCAGATGAACGGACACAACTCTTTATACTATATGCAGAAAGTAACGAACTT ACAAAAGTAAAACTCCTGAAAACACGCGAAGAAGGAGGAAGTACTAGTAGCTGTGAAGAACAAAAACAAGCGGCATATAA GCAGGCAAAAGCTGATTATGACAATGCTATCGCTAACTGTCAAAATGGTTCAATGCCATCTGGCTGCTTAATACAAGCAG CTGCAAAATATGATAGAGCCAAAGATATAGCAAACAAGGAATACAAAGAATGTATAGCTAATAAATGA
Upstream 100 bases:
>100_bases TTGACACTAGACCAAATATTTTCCTTTTATTGAATGATTATTATCCCTAAAATAAGTCTATTTTTCGTTACTTTGCATAC ACATTTAAATAAAACAGAAT
Downstream 100 bases:
>100_bases AAATAGTTAAATATATAATCTTATATAATATAATGTGGGGGATTAGCATCACTATGTGTTACTTTCACCGCTTTATTGAT GATATAAATTATTCTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK
Sequences:
>Translated_235_residues MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK >Mature_235_residues MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26823; Mature: 26823
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGST CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LIDSIASSDEFWEFEMSSELLADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLE HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCHH NELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNELTKVKLLKTREEGGSTSSCEE HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHH QKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGST CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LIDSIASSDEFWEFEMSSELLADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLE HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCHH NELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNELTKVKLLKTREEGGSTSSCEE HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHH QKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA