Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348949

Identifier: 29348949

GI number: 29348949

Start: 4576902

End: 4577609

Strand: Reverse

Name: 29348949

Synonym: BT_3540

Alternate gene names: NA

Gene position: 4577609-4576902 (Counterclockwise)

Preceding gene: 29348958

Following gene: 29348948

Centisome position: 73.12

GC content: 35.17

Gene sequence:

>708_bases
ATGATCACAAAAAAGAAAAAATACACTTTGTATTATGTAATGGCATTAGCCTGCGGACTGGTAGCTTCCTTTTTTATTTA
TAGTTGTAGCGCAGACGGATATTACTCTGAAGAAATAGAAAAAAACGAGGTAACTAATACACGTGCACTTTCATCAAAAA
TGATAAATAATGGAAGCACTCTTATTGATTCCATCGCCAGTTCAGATGAATTTTGGGAATTCGAAATGAGCTCCGAGCTT
TTAGCTGATAAGTTTCATGAGTACACTTCTATTTTAAGTGAAGAAGAATATGACAAACTTATGGAAAATCTGAATGATGA
TGACTACGTGGAAGACTTCATGAGGAAAGCCAATCTAGAAAATGAACTACAGCAACTGGCAAAAGCTAAAGAAAACCTGA
TTAAACATACAAGATTTTTAAGATTAAGCGCAGATGAACGGACACAACTCTTTATACTATATGCAGAAAGTAACGAACTT
ACAAAAGTAAAACTCCTGAAAACACGCGAAGAAGGAGGAAGTACTAGTAGCTGTGAAGAACAAAAACAAGCGGCATATAA
GCAGGCAAAAGCTGATTATGACAATGCTATCGCTAACTGTCAAAATGGTTCAATGCCATCTGGCTGCTTAATACAAGCAG
CTGCAAAATATGATAGAGCCAAAGATATAGCAAACAAGGAATACAAAGAATGTATAGCTAATAAATGA

Upstream 100 bases:

>100_bases
TTGACACTAGACCAAATATTTTCCTTTTATTGAATGATTATTATCCCTAAAATAAGTCTATTTTTCGTTACTTTGCATAC
ACATTTAAATAAAACAGAAT

Downstream 100 bases:

>100_bases
AAATAGTTAAATATATAATCTTATATAATATAATGTGGGGGATTAGCATCACTATGTGTTACTTTCACCGCTTTATTGAT
GATATAAATTATTCTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL
LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL
TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK

Sequences:

>Translated_235_residues
MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL
LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL
TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK
>Mature_235_residues
MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGSTLIDSIASSDEFWEFEMSSEL
LADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLENELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNEL
TKVKLLKTREEGGSTSSCEEQKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26823; Mature: 26823

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
LIDSIASSDEFWEFEMSSELLADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLE
HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCHH
NELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNELTKVKLLKTREEGGSTSSCEE
HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHH
QKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITKKKKYTLYYVMALACGLVASFFIYSCSADGYYSEEIEKNEVTNTRALSSKMINNGST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
LIDSIASSDEFWEFEMSSELLADKFHEYTSILSEEEYDKLMENLNDDDYVEDFMRKANLE
HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCHH
NELQQLAKAKENLIKHTRFLRLSADERTQLFILYAESNELTKVKLLKTREEGGSTSSCEE
HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHH
QKQAAYKQAKADYDNAIANCQNGSMPSGCLIQAAAKYDRAKDIANKEYKECIANK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA