Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348738

Identifier: 29348738

GI number: 29348738

Start: 4279689

End: 4281626

Strand: Reverse

Name: 29348738

Synonym: BT_3329

Alternate gene names: NA

Gene position: 4281626-4279689 (Counterclockwise)

Preceding gene: 29348739

Following gene: 29348737

Centisome position: 68.39

GC content: 42.36

Gene sequence:

>1938_bases
ATGAATTACTTTAAATCAATCATGTTAACCGCATTTGCGCTGTTTGCATTGGCAGCGTGCGATACAGACGACTTGAGAGA
CGATGTTGACAATCTGAAAGACCGCGTAGAGTCTTTGGAAGCACAAGTCAGTCTATTGAACGATAACATGACAGCTATCA
AGCGACTGCTTGAAGGTGGTCAGACTATCACAGAAGTGACGAATACAGACGGTACATATAAACTGAAACTGAGTAACGGA
GAAACCATCTCACTGACACAAGGCTCGAAGGGAGAAGTTGCTTATCCTGAGATTACTGTCAATGACGAGGGTCAATGGGT
AGTGAACGGTGAGGTATTGATGCAGAATGGCATACCTGTTCAGGCTGTGGGCACTCCCGGTAAGGATGGTATAGCTCCCA
AGTTCCGGATTACGGACGAGGGAAGTTTCTGGCAGGTAAGTTATGATAACGGAACCAGCTGGGAAGACGTACTCGACACA
GACGGTCAAAAGGTATCCGCAGTCAGCGATGGTTCCGGAGGAAGCAGTGCAGACTCTTTCTTTGAGGAAGTATACGTAGA
TTCAACCGGGGAATTCTTCGTTGTCAAACTGAAAGGACAGACGGAAGCCATCTCTATCCCTATCGTAAAAGACTTGCTTT
GCGAAATCACCGAACCGGAAACCGGAATGAAGAACGGATACTGGGAAATAGGCTATGGCAAGACTGCCACTACGACTGTA
AAAGTAAAAGGTGAAAACATTATCGTTACTGCTCCTGCCGGATGGGTGGCTACTGTGAGCGAAGCGGATGAAATGACCAA
TGTAGCTACATTGAGCATTACAGCTCCGGCAAACGCAATGAGTACACGTGCAACGGCGGATAACGGTTCCGACGTAACAG
TGCAGGTTAATAAGGGTGCCAGTTGGGCGGTTGCCAAGATTCAGGTGAAGGCAATTCAAGTAGTTGACAGCTACTATGCT
TTATATAATAGCGGAGCCACATTTACGGTAAATGGAATTGAAGTAAATAACACTAAATTCGAGAATGCAACATACATTGA
TTCTGATCAGACAATCACTACTCCAGGCATCTATTTTATCAAAGGAGGGGTCACTGTCAACTATAACAGTACCGTTAATG
CTGCTAATTTGCTTTTCATCGGAGATGATTCACAAAACATCAGTACAGTGGCAATTACAGGAAATTATATCAGACTCAGA
CAAAATACCGAGACTGGACATTTCTTGTGTAAAAACATTGTATTTAAAGCAGCCGAGGGATTCACTAATTATCTGTTTAC
TGTTTATGCAGACGAGTCATTTGCTAATGTAGCTTTTGATCAATGTCAGATTGTACTTAATGGCAAACCTGTAAGTGCCA
TTACTAACGACAAAAGGAGCATTGCCAATTTCAGCATGGAAAATAGTACCATCAAGATAACAGCTGTTACACAACAGTTT
ATTATCAATACCAGCAGTAATAAGAATCAGGATTATGGCAATGTCATCTTTAGAAACAACACATTCTATTGTCCGTCAGG
TAAAGTAAATCAATTGGTTTTATTCAATGGTTCAGCTTCAGGTATAGCCAGTCTGACCATAGAAAACAATACATTTATAA
ACTTGGAAACAAATACCGGTGGCTACGTAAACATAGGCAATCTGGCGAAAACCTCTATTAAAAATAATATCTTCTGGACA
AATACAGACGGAACAGGTAATGTAGTCATCATTCGTCCTCAGATAACATCCCCAACAGGAGATATTTGCGCAGATAACCT
CCTTTACAAAACTATGACTTATAATTGGCAAATGTTCTATGGAGGTAAACTACCGTTTGAAGGAGCAGAAGAACTGAAAG
CATTAACATCCAATCCGTTCGACGGCGGCACCTTCGACCTCGCCAACGGTATCTTCGTTCCGAATGCAGAATATGCCGAA
TACGGTGCAACCAACTAA

Upstream 100 bases:

>100_bases
ATGCCAATATCGATCATTCCTCCACGACTACTTACCACATGGTGGTAAACGTAGTGGAATAACAATAAACGAATAGAATA
ATAACTAATACATTATATCT

Downstream 100 bases:

>100_bases
TACCGACTAACGTATGAAAAAAGTAATATCAATCATATGTATCACCCTCCTCGTCGCACTTTACTCGTGCGACGAACGGG
ATGATCTGCGCTCCGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MNYFKSIMLTAFALFALAACDTDDLRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGGQTITEVTNTDGTYKLKLSNG
ETISLTQGSKGEVAYPEITVNDEGQWVVNGEVLMQNGIPVQAVGTPGKDGIAPKFRITDEGSFWQVSYDNGTSWEDVLDT
DGQKVSAVSDGSGGSSADSFFEEVYVDSTGEFFVVKLKGQTEAISIPIVKDLLCEITEPETGMKNGYWEIGYGKTATTTV
KVKGENIIVTAPAGWVATVSEADEMTNVATLSITAPANAMSTRATADNGSDVTVQVNKGASWAVAKIQVKAIQVVDSYYA
LYNSGATFTVNGIEVNNTKFENATYIDSDQTITTPGIYFIKGGVTVNYNSTVNAANLLFIGDDSQNISTVAITGNYIRLR
QNTETGHFLCKNIVFKAAEGFTNYLFTVYADESFANVAFDQCQIVLNGKPVSAITNDKRSIANFSMENSTIKITAVTQQF
IINTSSNKNQDYGNVIFRNNTFYCPSGKVNQLVLFNGSASGIASLTIENNTFINLETNTGGYVNIGNLAKTSIKNNIFWT
NTDGTGNVVIIRPQITSPTGDICADNLLYKTMTYNWQMFYGGKLPFEGAEELKALTSNPFDGGTFDLANGIFVPNAEYAE
YGATN

Sequences:

>Translated_645_residues
MNYFKSIMLTAFALFALAACDTDDLRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGGQTITEVTNTDGTYKLKLSNG
ETISLTQGSKGEVAYPEITVNDEGQWVVNGEVLMQNGIPVQAVGTPGKDGIAPKFRITDEGSFWQVSYDNGTSWEDVLDT
DGQKVSAVSDGSGGSSADSFFEEVYVDSTGEFFVVKLKGQTEAISIPIVKDLLCEITEPETGMKNGYWEIGYGKTATTTV
KVKGENIIVTAPAGWVATVSEADEMTNVATLSITAPANAMSTRATADNGSDVTVQVNKGASWAVAKIQVKAIQVVDSYYA
LYNSGATFTVNGIEVNNTKFENATYIDSDQTITTPGIYFIKGGVTVNYNSTVNAANLLFIGDDSQNISTVAITGNYIRLR
QNTETGHFLCKNIVFKAAEGFTNYLFTVYADESFANVAFDQCQIVLNGKPVSAITNDKRSIANFSMENSTIKITAVTQQF
IINTSSNKNQDYGNVIFRNNTFYCPSGKVNQLVLFNGSASGIASLTIENNTFINLETNTGGYVNIGNLAKTSIKNNIFWT
NTDGTGNVVIIRPQITSPTGDICADNLLYKTMTYNWQMFYGGKLPFEGAEELKALTSNPFDGGTFDLANGIFVPNAEYAE
YGATN
>Mature_645_residues
MNYFKSIMLTAFALFALAACDTDDLRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGGQTITEVTNTDGTYKLKLSNG
ETISLTQGSKGEVAYPEITVNDEGQWVVNGEVLMQNGIPVQAVGTPGKDGIAPKFRITDEGSFWQVSYDNGTSWEDVLDT
DGQKVSAVSDGSGGSSADSFFEEVYVDSTGEFFVVKLKGQTEAISIPIVKDLLCEITEPETGMKNGYWEIGYGKTATTTV
KVKGENIIVTAPAGWVATVSEADEMTNVATLSITAPANAMSTRATADNGSDVTVQVNKGASWAVAKIQVKAIQVVDSYYA
LYNSGATFTVNGIEVNNTKFENATYIDSDQTITTPGIYFIKGGVTVNYNSTVNAANLLFIGDDSQNISTVAITGNYIRLR
QNTETGHFLCKNIVFKAAEGFTNYLFTVYADESFANVAFDQCQIVLNGKPVSAITNDKRSIANFSMENSTIKITAVTQQF
IINTSSNKNQDYGNVIFRNNTFYCPSGKVNQLVLFNGSASGIASLTIENNTFINLETNTGGYVNIGNLAKTSIKNNIFWT
NTDGTGNVVIIRPQITSPTGDICADNLLYKTMTYNWQMFYGGKLPFEGAEELKALTSNPFDGGTFDLANGIFVPNAEYAE
YGATN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69782; Mature: 69782

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFKSIMLTAFALFALAACDTDDLRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC
QTITEVTNTDGTYKLKLSNGETISLTQGSKGEVAYPEITVNDEGQWVVNGEVLMQNGIPV
CEEEEEECCCCEEEEEECCCCEEEEECCCCCCEECCEEEECCCCCEEEECEEEEECCCEE
QAVGTPGKDGIAPKFRITDEGSFWQVSYDNGTSWEDVLDTDGQKVSAVSDGSGGSSADSF
EEECCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHH
FEEVYVDSTGEFFVVKLKGQTEAISIPIVKDLLCEITEPETGMKNGYWEIGYGKTATTTV
HHHHEECCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEE
KVKGENIIVTAPAGWVATVSEADEMTNVATLSITAPANAMSTRATADNGSDVTVQVNKGA
EEECCEEEEECCCCCEEEECCHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCC
SWAVAKIQVKAIQVVDSYYALYNSGATFTVNGIEVNNTKFENATYIDSDQTITTPGIYFI
CEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEEEECCEEECCCEEECCCCEEECCCEEEE
KGGVTVNYNSTVNAANLLFIGDDSQNISTVAITGNYIRLRQNTETGHFLCKNIVFKAAEG
ECCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCC
FTNYLFTVYADESFANVAFDQCQIVLNGKPVSAITNDKRSIANFSMENSTIKITAVTQQF
CCEEEEEEEECCCHHHEEEEEEEEEECCCCCEEECCCCHHHHEEEECCCEEEEEEEEEEE
IINTSSNKNQDYGNVIFRNNTFYCPSGKVNQLVLFNGSASGIASLTIENNTFINLETNTG
EEECCCCCCCCCCCEEEECCEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCC
GYVNIGNLAKTSIKNNIFWTNTDGTGNVVIIRPQITSPTGDICADNLLYKTMTYNWQMFY
CEEEECCCCHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEEEEEEEE
GGKLPFEGAEELKALTSNPFDGGTFDLANGIFVPNAEYAEYGATN
CCCCCCCCHHHHHHHHCCCCCCCEEECCCCEECCCCCHHHCCCCC
>Mature Secondary Structure
MNYFKSIMLTAFALFALAACDTDDLRDDVDNLKDRVESLEAQVSLLNDNMTAIKRLLEGG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC
QTITEVTNTDGTYKLKLSNGETISLTQGSKGEVAYPEITVNDEGQWVVNGEVLMQNGIPV
CEEEEEECCCCEEEEEECCCCEEEEECCCCCCEECCEEEECCCCCEEEECEEEEECCCEE
QAVGTPGKDGIAPKFRITDEGSFWQVSYDNGTSWEDVLDTDGQKVSAVSDGSGGSSADSF
EEECCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHH
FEEVYVDSTGEFFVVKLKGQTEAISIPIVKDLLCEITEPETGMKNGYWEIGYGKTATTTV
HHHHEECCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEE
KVKGENIIVTAPAGWVATVSEADEMTNVATLSITAPANAMSTRATADNGSDVTVQVNKGA
EEECCEEEEECCCCCEEEECCHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCC
SWAVAKIQVKAIQVVDSYYALYNSGATFTVNGIEVNNTKFENATYIDSDQTITTPGIYFI
CEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEEEECCEEECCCEEECCCCEEECCCEEEE
KGGVTVNYNSTVNAANLLFIGDDSQNISTVAITGNYIRLRQNTETGHFLCKNIVFKAAEG
ECCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCC
FTNYLFTVYADESFANVAFDQCQIVLNGKPVSAITNDKRSIANFSMENSTIKITAVTQQF
CCEEEEEEEECCCHHHEEEEEEEEEECCCCCEEECCCCHHHHEEEECCCEEEEEEEEEEE
IINTSSNKNQDYGNVIFRNNTFYCPSGKVNQLVLFNGSASGIASLTIENNTFINLETNTG
EEECCCCCCCCCCCEEEECCEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCC
GYVNIGNLAKTSIKNNIFWTNTDGTGNVVIIRPQITSPTGDICADNLLYKTMTYNWQMFY
CEEEECCCCHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEEEEEEEE
GGKLPFEGAEELKALTSNPFDGGTFDLANGIFVPNAEYAEYGATN
CCCCCCCCHHHHHHHHCCCCCCCEEECCCCEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA