Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348737

Identifier: 29348737

GI number: 29348737

Start: 4277069

End: 4279675

Strand: Reverse

Name: 29348737

Synonym: BT_3328

Alternate gene names: NA

Gene position: 4279675-4277069 (Counterclockwise)

Preceding gene: 29348738

Following gene: 29348736

Centisome position: 68.36

GC content: 50.52

Gene sequence:

>2607_bases
ATGAAAAAAGTAATATCAATCATATGTATCACCCTCCTCGTCGCACTTTACTCGTGCGACGAACGGGATGATCTGCGCTC
CGACATTGACAACCTGAAAGAACGGGTAGCCAATCTGGAAGCGAGCATAGAACAGATGAACTCGGACATCAGCAACTATC
AGCAGATGGTTGAAGGTAAGATTCTGGTGGTGGGATATAGCAAGGATGAACAGGATAACTATACCATCGAACTGAGTAAC
GGCGAAACTGTAACCATATACAGCGGCAAAGTAGACATGAACGATATGCCTTTGTTCAGCGTCAACGCGTCAGGTCACTG
GGCATATACCATCAACGACATGACCACCGAACTGCTCGTTAACGACAAACCGGTAAGCGCCATCCCCGAAGCGGGAACAG
CAGGCGTCACCCCGAAACTGAAGGTAGATGCAAACGGTTTCTGGCTGATCTCTATCGACAACGGAAGCACCTGGAACAAA
TTGGGCAACAACCAGATTGCCGACGGAACGCAAGCCGTTGCCAACGCAAGTTCCCTGTTCAGCAACGTAACCATCGACGA
AGCGACCGGACAGATCACCTTTACCATCCGTGCCGACAACAGCCAAGTAAAAGTCCCCATCTACGGAAAAGACTTCTACC
TGACAATCAAGTATGAAGGCACAGCCACTTTCGGTCTGGGACAAAAGCAGGAATTCCTTGTAGAACAAGCCAACGTGGAA
ACAGCCACCATCGAAAACCAGACATGGGGCGTGAAACTGACGGAAAACAAACTGATCGTCACCGCCCCCAAAACAAACGT
GCAAGGGAAAGAATACGAAGAACAGATTTACATCAAGATATTCTCGAAAGAAGGTTACTGCCGGGTAGTGAAACTTCCGG
TAAAACTGCTGACCACGGAGATAGATGCCAACTCGGCTTTAGCTTGGCAACGCTTCAGGCAGGGAGAGGACAATGTGCTA
CCCGACTATTCGTATGCCGGATATAATCATGGAGAAAGTGCGCCGCAAGGCGCATTTTCTTTAGGATACCAAGTGATCAA
CGTAAAAGAGCGCATGACCGCCAAGAACATGACCGCCCGTGAAGCGCTGATCAGCATCCTGCAAGAGAAAGGCATGACAA
GAGTAAACGGAACCAACAAGCTGAACGCCAACGCGAAGATTGTAATCTATTTCCCCGCAGGCGACTACATTCTTCACAAC
GACGACGATAACACCCGCGACGAAAGCAAGCAGAAGGATGCCGTTGATTCGAAAAACAACAATGTCAGCAGTGGCATTGA
AATCTATGGCGGTAACTTTGTGATCAAAGGCGACGGTCCCGACAAGACCCGTCTGATCATGGAAACGCCTAATCTGCCGA
CAAGTATCAGCAACCTCAGTTCATCACCTATACTGTTGGCAATCAAGCACACCAACGGTCCGAACAATGCCGGTAACTCC
CCCAAGCTTGCTTCCGTTACCGAGAATGCCAAGCGCGGAGACTTTACCGTGAAAGTCAGCGGAACCACCGGAATCTCCTC
CGGACAGTGGGTACAGTTGCGCTTGCGCAGCGGAGACAGGGAACTGGTAAAGAAAGAGATCGGTCCGATTGCCCTCAACG
AGAACTGGGCGATAGCGAAAGCCCCTATCTCCATCAACCAAAGCTCCGACGACCTGTATGGCGTCAAAATCACCGAGTTT
CATCAGGTGAAATCCGCCTCAAACGGCAAGATCACTTTCTACGAACCGATCATGCACGACATCGACATCAAATATAACGA
TACGGAAGGGTGGGAAATCCGTACGTACAAATATCTGGAGAATGTCGGTGTGGAAGACCTGAGCTTCGTAGGAAACGCAT
TGGACGGCTACGCCCATCACGGAGAAGGACACGCCGAACAGGCTAAAGTAGGCTGGCAATACGACGGAGCCTATAAACCG
CTGCTGCTGCAACGTGTAGTCAATTCATGGGTACGCAACGTCCACTTCGAGAGTGTCAGCGAAGCGCTTACTTTTGCCGA
ATCTGCCAACAGCTCGGCATACGATATCCGTATCAGTGGAAAACGCGGACATTCAGCCGTACGTTCGCAAGGTTCTTCAC
GCGTCTTTATCGGCAAAGTCCGCGATGAAAGTGCAGGAAATGACGTATACGGCAAGAGTTGCCAAGGGCAGTTCCACGGT
TGCGGCGTATCGAAGCCAAGTGTAGGAACCGTATTATGGAACGTAACCTGGGGCAATGACGCCTGTTTCGAATCCCACGC
CACACAGCCCCGTGCCACGCTGATAGACAATTGCAGCGGCGGACTTGTATACTACCGCGCAGGAGGCGACGAAAATGAAG
TCCCCAATCACCTGGGCGACCTCACCCTGTGGAATCTGAATGTGACCGGAACGGATTCTCACGCTTCTAACTTCGCATGG
TGGAGCGACAGCGATACATGGTGGAAGATTTTCCCGCCTATCGTAGTCGGTACACATGGTATGAACGTGAAATTCTCCGG
TAAAGAGCAGCAACAAGTCACATATGAAGAAAGTACCGGTATGAAGGTATCCCCCGAATCTTTGTACGAGGCACAATTGC
GGGAACGTCTGGGCTATGTACCCGGATGGCTCAACGCACTTAAATAA

Upstream 100 bases:

>100_bases
AATCCGTTCGACGGCGGCACCTTCGACCTCGCCAACGGTATCTTCGTTCCGAATGCAGAATATGCCGAATACGGTGCAAC
CAACTAATACCGACTAACGT

Downstream 100 bases:

>100_bases
CAACCAATCACCCGCACGATTTTTCTAACCTTCAGTTAAAAACGTATATGAAAATCAGACTTTAATCAATTTAACACCCA
AAAGAGAGGGGCCGGGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 868; Mature: 868

Protein sequence:

>868_residues
MKKVISIICITLLVALYSCDERDDLRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGKILVVGYSKDEQDNYTIELSN
GETVTIYSGKVDMNDMPLFSVNASGHWAYTINDMTTELLVNDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNK
LGNNQIADGTQAVANASSLFSNVTIDEATGQITFTIRADNSQVKVPIYGKDFYLTIKYEGTATFGLGQKQEFLVEQANVE
TATIENQTWGVKLTENKLIVTAPKTNVQGKEYEEQIYIKIFSKEGYCRVVKLPVKLLTTEIDANSALAWQRFRQGEDNVL
PDYSYAGYNHGESAPQGAFSLGYQVINVKERMTAKNMTAREALISILQEKGMTRVNGTNKLNANAKIVIYFPAGDYILHN
DDDNTRDESKQKDAVDSKNNNVSSGIEIYGGNFVIKGDGPDKTRLIMETPNLPTSISNLSSSPILLAIKHTNGPNNAGNS
PKLASVTENAKRGDFTVKVSGTTGISSGQWVQLRLRSGDRELVKKEIGPIALNENWAIAKAPISINQSSDDLYGVKITEF
HQVKSASNGKITFYEPIMHDIDIKYNDTEGWEIRTYKYLENVGVEDLSFVGNALDGYAHHGEGHAEQAKVGWQYDGAYKP
LLLQRVVNSWVRNVHFESVSEALTFAESANSSAYDIRISGKRGHSAVRSQGSSRVFIGKVRDESAGNDVYGKSCQGQFHG
CGVSKPSVGTVLWNVTWGNDACFESHATQPRATLIDNCSGGLVYYRAGGDENEVPNHLGDLTLWNLNVTGTDSHASNFAW
WSDSDTWWKIFPPIVVGTHGMNVKFSGKEQQQVTYEESTGMKVSPESLYEAQLRERLGYVPGWLNALK

Sequences:

>Translated_868_residues
MKKVISIICITLLVALYSCDERDDLRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGKILVVGYSKDEQDNYTIELSN
GETVTIYSGKVDMNDMPLFSVNASGHWAYTINDMTTELLVNDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNK
LGNNQIADGTQAVANASSLFSNVTIDEATGQITFTIRADNSQVKVPIYGKDFYLTIKYEGTATFGLGQKQEFLVEQANVE
TATIENQTWGVKLTENKLIVTAPKTNVQGKEYEEQIYIKIFSKEGYCRVVKLPVKLLTTEIDANSALAWQRFRQGEDNVL
PDYSYAGYNHGESAPQGAFSLGYQVINVKERMTAKNMTAREALISILQEKGMTRVNGTNKLNANAKIVIYFPAGDYILHN
DDDNTRDESKQKDAVDSKNNNVSSGIEIYGGNFVIKGDGPDKTRLIMETPNLPTSISNLSSSPILLAIKHTNGPNNAGNS
PKLASVTENAKRGDFTVKVSGTTGISSGQWVQLRLRSGDRELVKKEIGPIALNENWAIAKAPISINQSSDDLYGVKITEF
HQVKSASNGKITFYEPIMHDIDIKYNDTEGWEIRTYKYLENVGVEDLSFVGNALDGYAHHGEGHAEQAKVGWQYDGAYKP
LLLQRVVNSWVRNVHFESVSEALTFAESANSSAYDIRISGKRGHSAVRSQGSSRVFIGKVRDESAGNDVYGKSCQGQFHG
CGVSKPSVGTVLWNVTWGNDACFESHATQPRATLIDNCSGGLVYYRAGGDENEVPNHLGDLTLWNLNVTGTDSHASNFAW
WSDSDTWWKIFPPIVVGTHGMNVKFSGKEQQQVTYEESTGMKVSPESLYEAQLRERLGYVPGWLNALK
>Mature_868_residues
MKKVISIICITLLVALYSCDERDDLRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGKILVVGYSKDEQDNYTIELSN
GETVTIYSGKVDMNDMPLFSVNASGHWAYTINDMTTELLVNDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNK
LGNNQIADGTQAVANASSLFSNVTIDEATGQITFTIRADNSQVKVPIYGKDFYLTIKYEGTATFGLGQKQEFLVEQANVE
TATIENQTWGVKLTENKLIVTAPKTNVQGKEYEEQIYIKIFSKEGYCRVVKLPVKLLTTEIDANSALAWQRFRQGEDNVL
PDYSYAGYNHGESAPQGAFSLGYQVINVKERMTAKNMTAREALISILQEKGMTRVNGTNKLNANAKIVIYFPAGDYILHN
DDDNTRDESKQKDAVDSKNNNVSSGIEIYGGNFVIKGDGPDKTRLIMETPNLPTSISNLSSSPILLAIKHTNGPNNAGNS
PKLASVTENAKRGDFTVKVSGTTGISSGQWVQLRLRSGDRELVKKEIGPIALNENWAIAKAPISINQSSDDLYGVKITEF
HQVKSASNGKITFYEPIMHDIDIKYNDTEGWEIRTYKYLENVGVEDLSFVGNALDGYAHHGEGHAEQAKVGWQYDGAYKP
LLLQRVVNSWVRNVHFESVSEALTFAESANSSAYDIRISGKRGHSAVRSQGSSRVFIGKVRDESAGNDVYGKSCQGQFHG
CGVSKPSVGTVLWNVTWGNDACFESHATQPRATLIDNCSGGLVYYRAGGDENEVPNHLGDLTLWNLNVTGTDSHASNFAW
WSDSDTWWKIFPPIVVGTHGMNVKFSGKEQQQVTYEESTGMKVSPESLYEAQLRERLGYVPGWLNALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95743; Mature: 95743

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVISIICITLLVALYSCDERDDLRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
ILVVGYSKDEQDNYTIELSNGETVTIYSGKVDMNDMPLFSVNASGHWAYTINDMTTELLV
EEEEEECCCCCCCEEEEECCCCEEEEEECEECCCCCCEEEECCCCEEEEEECCCEEEEEE
NDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNKLGNNQIADGTQAVANASSLF
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHH
SNVTIDEATGQITFTIRADNSQVKVPIYGKDFYLTIKYEGTATFGLGQKQEFLVEQANVE
HCCEEECCCCEEEEEEEECCCEEEEEEECCEEEEEEEECCEEEECCCCCHHHHHHHCCCE
TATIENQTWGVKLTENKLIVTAPKTNVQGKEYEEQIYIKIFSKEGYCRVVKLPVKLLTTE
EEEECCCEEEEEEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECEEEEEEE
IDANSALAWQRFRQGEDNVLPDYSYAGYNHGESAPQGAFSLGYQVINVKERMTAKNMTAR
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEHHHHHHHCCCHHH
EALISILQEKGMTRVNGTNKLNANAKIVIYFPAGDYILHNDDDNTRDESKQKDAVDSKNN
HHHHHHHHHCCCEEECCCCEECCCEEEEEEECCCCEEEECCCCCCCCHHHHHHCCCCCCC
NVSSGIEIYGGNFVIKGDGPDKTRLIMETPNLPTSISNLSSSPILLAIKHTNGPNNAGNS
CCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCC
PKLASVTENAKRGDFTVKVSGTTGISSGQWVQLRLRSGDRELVKKEIGPIALNENWAIAK
CCEEHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCCEEECCCEEEEE
APISINQSSDDLYGVKITEFHQVKSASNGKITFYEPIMHDIDIKYNDTEGWEIRTYKYLE
CCEEECCCCCCEEEEEEEHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEHHHH
NVGVEDLSFVGNALDGYAHHGEGHAEQAKVGWQYDGAYKPLLLQRVVNSWVRNVHFESVS
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
EALTFAESANSSAYDIRISGKRGHSAVRSQGSSRVFIGKVRDESAGNDVYGKSCQGQFHG
HHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
CGVSKPSVGTVLWNVTWGNDACFESHATQPRATLIDNCSGGLVYYRAGGDENEVPNHLGD
CCCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHEEECCCCCEEEEECCCCCCCCCHHHCC
LTLWNLNVTGTDSHASNFAWWSDSDTWWKIFPPIVVGTHGMNVKFSGKEQQQVTYEESTG
EEEEEEEEECCCCCCCCEEEECCCCCEEEECCCEEECCCCCEEEECCCCCCEEEEECCCC
MKVSPESLYEAQLRERLGYVPGWLNALK
CEECHHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MKKVISIICITLLVALYSCDERDDLRSDIDNLKERVANLEASIEQMNSDISNYQQMVEGK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
ILVVGYSKDEQDNYTIELSNGETVTIYSGKVDMNDMPLFSVNASGHWAYTINDMTTELLV
EEEEEECCCCCCCEEEEECCCCEEEEEECEECCCCCCEEEECCCCEEEEEECCCEEEEEE
NDKPVSAIPEAGTAGVTPKLKVDANGFWLISIDNGSTWNKLGNNQIADGTQAVANASSLF
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHH
SNVTIDEATGQITFTIRADNSQVKVPIYGKDFYLTIKYEGTATFGLGQKQEFLVEQANVE
HCCEEECCCCEEEEEEEECCCEEEEEEECCEEEEEEEECCEEEECCCCCHHHHHHHCCCE
TATIENQTWGVKLTENKLIVTAPKTNVQGKEYEEQIYIKIFSKEGYCRVVKLPVKLLTTE
EEEECCCEEEEEEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECEEEEEEE
IDANSALAWQRFRQGEDNVLPDYSYAGYNHGESAPQGAFSLGYQVINVKERMTAKNMTAR
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEHHHHHHHCCCHHH
EALISILQEKGMTRVNGTNKLNANAKIVIYFPAGDYILHNDDDNTRDESKQKDAVDSKNN
HHHHHHHHHCCCEEECCCCEECCCEEEEEEECCCCEEEECCCCCCCCHHHHHHCCCCCCC
NVSSGIEIYGGNFVIKGDGPDKTRLIMETPNLPTSISNLSSSPILLAIKHTNGPNNAGNS
CCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCC
PKLASVTENAKRGDFTVKVSGTTGISSGQWVQLRLRSGDRELVKKEIGPIALNENWAIAK
CCEEHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCCEEECCCEEEEE
APISINQSSDDLYGVKITEFHQVKSASNGKITFYEPIMHDIDIKYNDTEGWEIRTYKYLE
CCEEECCCCCCEEEEEEEHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEHHHH
NVGVEDLSFVGNALDGYAHHGEGHAEQAKVGWQYDGAYKPLLLQRVVNSWVRNVHFESVS
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
EALTFAESANSSAYDIRISGKRGHSAVRSQGSSRVFIGKVRDESAGNDVYGKSCQGQFHG
HHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
CGVSKPSVGTVLWNVTWGNDACFESHATQPRATLIDNCSGGLVYYRAGGDENEVPNHLGD
CCCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHEEECCCCCEEEEECCCCCCCCCHHHCC
LTLWNLNVTGTDSHASNFAWWSDSDTWWKIFPPIVVGTHGMNVKFSGKEQQQVTYEESTG
EEEEEEEEECCCCCCCCEEEECCCCCEEEECCCEEECCCCCEEEECCCCCCEEEEECCCC
MKVSPESLYEAQLRERLGYVPGWLNALK
CEECHHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA