Click here to switch to the map view.

The map label for this gene is spmA [H]

Identifier: 29348693

GI number: 29348693

Start: 4200610

End: 4201842

Strand: Reverse

Name: spmA [H]

Synonym: BT_3284

Alternate gene names: 29348693

Gene position: 4201842-4200610 (Counterclockwise)

Preceding gene: 29348699

Following gene: 29348692

Centisome position: 67.12

GC content: 47.53

Gene sequence:

>1233_bases
ATGGTTCTAAATTATATCTGGATAGCATTCTTCGTTATCGCCTTCATTATCGCCCTGATAAAAGTAATTTTTCTGGGAGA
CACGGAGATATTTACAGCTATCATGAACTCAACTTTCGACTCTTCGAAAACCGCTTTCGAAATATCTCTGGGACTGACCG
GAGTACTGGCCCTCTGGCTCGGTATCATGAAGATCGGAGAGAACAGCGGACTGATCAATGCACTCGCCCGCTTTCTGAGT
CCGGTACTCTGCCGCCTGTTTCCGGACATTCCCAAAGGGCATCCGGTATTGGGTTCCATCTTCATGAATATGTCCGCCAA
TATGCTCGGGCTCGACAATGCCGCCACCCCATTGGGACTCAAAGCGATGAAAGAACTGCAGGAACTGAACCCGAAGAAAG
ATACGGCTTCCAATCCGATGATCATGTTTCTGGTTATCAATACTTCCGGCCTCATCATCATCCCGATCAGTATCATGGTA
TACCGTGCGCAGATGGGGGCTGCCCAGCCTACGGATGTGTTTATCCCTATCCTGCTGAGTACTTTTATCTCGACTCTGGT
CGGTGTCATAGCCGTCAGTATCGCCCAGAAGATCAATCTGATCAATAAGCCTATCCTGATATTGATGGGCGTTATCTGCC
TTTTCTTCTCCGGATTGATTTATCTGTTTCTGAATATTTCGCGTGAGGAAATGGGTACTTACTCTACGCTGATAGCAAAT
ATTCTTCTGTTCGGGGTGATCATCCTGTTTATTCTGACAGGGGTCCGGAAGAAGATTAACGTATATGATTCTTTTGTAGA
AGGTGCCAAAGAAGGCTTCACGACAGCCGTACGAATCATTCCATATCTGGTTGCCTTCCTTGTAGGCATTGCCGTATTCC
GTACTGCGGGAGCGATGGATTTCCTTGTGGGAGGCATTGGTTATGTAGTCGATCTGTGCGGAGTGGATACCAGTTTTGTG
GGAGCATTGCCGACAGCGCTGATGAAGTCTCTCAGCGGTAGCGGTGCCAATGGGCTGATGATTGACACGATGAAAGAGAT
GGGACCGGATTCGTTTGTAGGCCGAATGAGTTGCGTAGTACGCGGAGCTTCGGACACCACTTTCTATATCCTTGCCGTTT
ACTTCGGCAGCGTCGGAATCAGTAAAACCCGGAATGCAGTCACCTGCGGCTTGATTGCAGACTTCTCCGGTATTATAGCC
GCCATCTTAATCAGTTATTTATTTTTCTTTTAA

Upstream 100 bases:

>100_bases
ACAAGCCCGGTTTCGGTCTTCTACTCTTTTGCCCGAAAACAATTAGTTTATTTAAAACGTAATAACTACTTTTGCACCAT
CTATATACACGCAATCGACT

Downstream 100 bases:

>100_bases
ATCATAGACTCAATTATGGCTGTAACTTATCAAACCGAAGGCGTCAAGATGCCTGATATCAAAAAACGGGAAACTACAGA
ATGGATAAAGAATGTAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MVLNYIWIAFFVIAFIIALIKVIFLGDTEIFTAIMNSTFDSSKTAFEISLGLTGVLALWLGIMKIGENSGLINALARFLS
PVLCRLFPDIPKGHPVLGSIFMNMSANMLGLDNAATPLGLKAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMV
YRAQMGAAQPTDVFIPILLSTFISTLVGVIAVSIAQKINLINKPILILMGVICLFFSGLIYLFLNISREEMGTYSTLIAN
ILLFGVIILFILTGVRKKINVYDSFVEGAKEGFTTAVRIIPYLVAFLVGIAVFRTAGAMDFLVGGIGYVVDLCGVDTSFV
GALPTALMKSLSGSGANGLMIDTMKEMGPDSFVGRMSCVVRGASDTTFYILAVYFGSVGISKTRNAVTCGLIADFSGIIA
AILISYLFFF

Sequences:

>Translated_410_residues
MVLNYIWIAFFVIAFIIALIKVIFLGDTEIFTAIMNSTFDSSKTAFEISLGLTGVLALWLGIMKIGENSGLINALARFLS
PVLCRLFPDIPKGHPVLGSIFMNMSANMLGLDNAATPLGLKAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMV
YRAQMGAAQPTDVFIPILLSTFISTLVGVIAVSIAQKINLINKPILILMGVICLFFSGLIYLFLNISREEMGTYSTLIAN
ILLFGVIILFILTGVRKKINVYDSFVEGAKEGFTTAVRIIPYLVAFLVGIAVFRTAGAMDFLVGGIGYVVDLCGVDTSFV
GALPTALMKSLSGSGANGLMIDTMKEMGPDSFVGRMSCVVRGASDTTFYILAVYFGSVGISKTRNAVTCGLIADFSGIIA
AILISYLFFF
>Mature_410_residues
MVLNYIWIAFFVIAFIIALIKVIFLGDTEIFTAIMNSTFDSSKTAFEISLGLTGVLALWLGIMKIGENSGLINALARFLS
PVLCRLFPDIPKGHPVLGSIFMNMSANMLGLDNAATPLGLKAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMV
YRAQMGAAQPTDVFIPILLSTFISTLVGVIAVSIAQKINLINKPILILMGVICLFFSGLIYLFLNISREEMGTYSTLIAN
ILLFGVIILFILTGVRKKINVYDSFVEGAKEGFTTAVRIIPYLVAFLVGIAVFRTAGAMDFLVGGIGYVVDLCGVDTSFV
GALPTALMKSLSGSGANGLMIDTMKEMGPDSFVGRMSCVVRGASDTTFYILAVYFGSVGISKTRNAVTCGLIADFSGIIA
AILISYLFFF

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG2715

COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 44139; Mature: 44139

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNYIWIAFFVIAFIIALIKVIFLGDTEIFTAIMNSTFDSSKTAFEISLGLTGVLALWL
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
GIMKIGENSGLINALARFLSPVLCRLFPDIPKGHPVLGSIFMNMSANMLGLDNAATPLGL
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCHHH
KAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMVYRAQMGAAQPTDVFIPILLS
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH
TFISTLVGVIAVSIAQKINLINKPILILMGVICLFFSGLIYLFLNISREEMGTYSTLIAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILLFGVIILFILTGVRKKINVYDSFVEGAKEGFTTAVRIIPYLVAFLVGIAVFRTAGAMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FLVGGIGYVVDLCGVDTSFVGALPTALMKSLSGSGANGLMIDTMKEMGPDSFVGRMSCVV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCHHHHHHHHHHE
RGASDTTFYILAVYFGSVGISKTRNAVTCGLIADFSGIIAAILISYLFFF
ECCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVLNYIWIAFFVIAFIIALIKVIFLGDTEIFTAIMNSTFDSSKTAFEISLGLTGVLALWL
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
GIMKIGENSGLINALARFLSPVLCRLFPDIPKGHPVLGSIFMNMSANMLGLDNAATPLGL
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCHHH
KAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMVYRAQMGAAQPTDVFIPILLS
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH
TFISTLVGVIAVSIAQKINLINKPILILMGVICLFFSGLIYLFLNISREEMGTYSTLIAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILLFGVIILFILTGVRKKINVYDSFVEGAKEGFTTAVRIIPYLVAFLVGIAVFRTAGAMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FLVGGIGYVVDLCGVDTSFVGALPTALMKSLSGSGANGLMIDTMKEMGPDSFVGRMSCVV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCHHHHHHHHHHE
RGASDTTFYILAVYFGSVGISKTRNAVTCGLIADFSGIIAAILISYLFFF
ECCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 1548223; 9384377; 7642500 [H]