Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348605

Identifier: 29348605

GI number: 29348605

Start: 4086246

End: 4086956

Strand: Reverse

Name: 29348605

Synonym: BT_3196

Alternate gene names: NA

Gene position: 4086956-4086246 (Counterclockwise)

Preceding gene: 29348626

Following gene: 29348602

Centisome position: 65.28

GC content: 46.41

Gene sequence:

>711_bases
ATGGATACATTTCTAGATGTTTCGGGAATAGTAAAGCGCGCCAAGCAGGCGCTCAACTTTAAAAAGGACAGTGAACTGGC
CAGTTACTTAGGTGTTTCACGTGCAACATTATCCAACTGGTGCGCCAGAAACCGGATTGACTTTCATCTGCTGCTCAACA
AAATGAGAGATGTAGACCTCAATTGGCTGCTGGTTGGGAAGGGTACCCCCAGACATCAAACCAAGTTATGCAAAAGCGAT
TTAGCAAGCGGTGAGGTCCAGATGATTCACAACCCTAAAACAGTAGAGGCGTTGGACGACCGCAGCGTTGCCCTATATGA
TATTACAGCTGCCGCCAATCTGAAAACGTTGCTCACCAACAAGCGACAGTATATGGTAGGAAAGATACAGATTCCAAGCA
TTCCCTTATGTGACGGAGCCGTCTACATCAGTGGCGACAGCATGTATCCGATACTGAAATCGGGAGACATCGTAGGCTTT
AAAGAGATTAACAGTTTCAGCAACCTTATTTACGGCGAAATGTATCTGGTTTCGTTTACTATCGAAGGAGACGAGTACCT
GGCGGTGAAGTATGTGAACCGCTCGGAAAAGGAAGGATGCCTCAAGCTGGTAAGCTACAACGCTCATCACGACCCAATGG
ATATCCCTTTCAGCACCATCAATGCAATGGCAATCGTGAAATTCTCCATCCGCAGACACATGATGATGTAA

Upstream 100 bases:

>100_bases
AAACGGTTTTAGAAATTAACGCTAAAAAATTATATAACTGACTATCAATGAACGAATAAGAAGTTCCAACATCTTTACAC
TAATTTAAAACAAGAATAAA

Downstream 100 bases:

>100_bases
TTTGAATGACGCTTCTTTTGCTCCGGAAAGAGGAAAAGGGCAAAGTTTAAACGAAGTGAACCCCGAAAGTTTATTGTCTG
ACTTTCGGGGTTCATTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Repressor

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDTFLDVSGIVKRAKQALNFKKDSELASYLGVSRATLSNWCARNRIDFHLLLNKMRDVDLNWLLVGKGTPRHQTKLCKSD
LASGEVQMIHNPKTVEALDDRSVALYDITAAANLKTLLTNKRQYMVGKIQIPSIPLCDGAVYISGDSMYPILKSGDIVGF
KEINSFSNLIYGEMYLVSFTIEGDEYLAVKYVNRSEKEGCLKLVSYNAHHDPMDIPFSTINAMAIVKFSIRRHMMM

Sequences:

>Translated_236_residues
MDTFLDVSGIVKRAKQALNFKKDSELASYLGVSRATLSNWCARNRIDFHLLLNKMRDVDLNWLLVGKGTPRHQTKLCKSD
LASGEVQMIHNPKTVEALDDRSVALYDITAAANLKTLLTNKRQYMVGKIQIPSIPLCDGAVYISGDSMYPILKSGDIVGF
KEINSFSNLIYGEMYLVSFTIEGDEYLAVKYVNRSEKEGCLKLVSYNAHHDPMDIPFSTINAMAIVKFSIRRHMMM
>Mature_236_residues
MDTFLDVSGIVKRAKQALNFKKDSELASYLGVSRATLSNWCARNRIDFHLLLNKMRDVDLNWLLVGKGTPRHQTKLCKSD
LASGEVQMIHNPKTVEALDDRSVALYDITAAANLKTLLTNKRQYMVGKIQIPSIPLCDGAVYISGDSMYPILKSGDIVGF
KEINSFSNLIYGEMYLVSFTIEGDEYLAVKYVNRSEKEGCLKLVSYNAHHDPMDIPFSTINAMAIVKFSIRRHMMM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26594; Mature: 26594

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFLDVSGIVKRAKQALNFKKDSELASYLGVSRATLSNWCARNRIDFHLLLNKMRDVDL
CCCEECHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NWLLVGKGTPRHQTKLCKSDLASGEVQMIHNPKTVEALDDRSVALYDITAAANLKTLLTN
EEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEEECCCCHHHHHCC
KRQYMVGKIQIPSIPLCDGAVYISGDSMYPILKSGDIVGFKEINSFSNLIYGEMYLVSFT
CCEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEHHHHHHHHHHHCCEEEEEEEE
IEGDEYLAVKYVNRSEKEGCLKLVSYNAHHDPMDIPFSTINAMAIVKFSIRRHMMM
ECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTFLDVSGIVKRAKQALNFKKDSELASYLGVSRATLSNWCARNRIDFHLLLNKMRDVDL
CCCEECHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NWLLVGKGTPRHQTKLCKSDLASGEVQMIHNPKTVEALDDRSVALYDITAAANLKTLLTN
EEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCEEEEEEECCCCHHHHHCC
KRQYMVGKIQIPSIPLCDGAVYISGDSMYPILKSGDIVGFKEINSFSNLIYGEMYLVSFT
CCEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEHHHHHHHHHHHCCEEEEEEEE
IEGDEYLAVKYVNRSEKEGCLKLVSYNAHHDPMDIPFSTINAMAIVKFSIRRHMMM
ECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA