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The map label for this gene is ygfH [H]

Identifier: 29348602

GI number: 29348602

Start: 4082312

End: 4083811

Strand: Reverse

Name: ygfH [H]

Synonym: BT_3193

Alternate gene names: 29348602

Gene position: 4083811-4082312 (Counterclockwise)

Preceding gene: 29348605

Following gene: 29348601

Centisome position: 65.23

GC content: 51.8

Gene sequence:

>1500_bases
ATGTCATTCAATCGTATTTCGGCAGCAGAAGCTGCAAGCCTGATCAAACATGGCTACAACATCGGTCTGAGCGGATTTAC
TCCCGCCGGAACTGCAAAGGCTGTTACAGCTGAACTTGCAAAAATTGCAGAAGCGGAACATGCCAAAGGTAATCCATTTC
AAGTAGGAATTTTTACAGGTGCTTCTACCGGAGAATCTTGTGACGGCGTTATGTCTCGCGCAAAGGCCATCCGCTACCGC
GCCCCTTATACCACCAACTCCGACTTCCGCAAAGCCGTGAATAACGGTGAAATTGCCTACAACGACATCCATCTGTCGCA
AATGGCACAGGAAGTGCGCTATGGCTTCATGGGCAAAGTGAACGTAGCCATCATCGAAGCCTGCGAAGTGACTCCGGACG
GAAAGATTTATCTGACTGCTGCCGGTGGTATTTCTCCGACTATCTGCCGCCTGGCGGACCAGATCATCGTTGAGTTGAAC
GCCGCACACAGCAAATCCTGCATGGGTCTGCACGACGTGTACGAACCGCTCGACCCGCCTTACCGCCGCGAAATCCCCAT
CTACAAGCCGAGTGACCGCATCGGATTGCCTTATATTCAGGTAGACCCGAAAAAGATCGTAGGCGTAGTAGAAACCAACT
GGCCGGACGAAGCACGCTCATTTGCCGATGCCGATCCGTTGACTGACAAAATCGGTCAGAACGTTGCCGACTTCCTCGCT
GCCGACATGAAGCGTGGCATCATTCCGTCTACTTTCCTTCCGCTGCAGTCGGGCGTAGGAAATATCGCTAACGCTGTGCT
CGGTGCACTGGGACGTGACAAGACGATTCCCGCATTCGAAATGTACACAGAGGTTATCCAGAACTCCGTCATCGGATTGA
TCCGTGAAGGACGCATCAAATTCGGTAGCGCCTGCTCACTGACTGTTACCAACGACTGTCTGGAAGGTATTTACAACGAT
ATGGATTTCTTCCGCGACAAGCTGGTTCTCCGCCCGTCGGAAATCTCAAACAATCCGGAAGTGGTTCGCCGACTGGGTAT
TATCTCTATCAATACAGCTATCGAAGTGGACTTGTACGGTAACGTAAACTCTACTCATATCGGTGGAACGAAGATGATGA
ACGGTATCGGTGGCTCGGGAGACTTCACCCGCAATGCTTATATCTCTATCTTCACTTGTCCGTCTGTTGCCAAAGAAGGT
AAGATCAGTGCTATCGTCCCGATGGTTTCTCACCTCGACCACAGCGAACACTCCGTGAATATCATTATCACCGAGCAAGG
TGTAGCCGACCTGCGTGGCAAGAGCCCGAAGGAACGTGCACAAGCCATCATCGAAAACTGTGCACATCCCGACTATAAAC
AGCTTCTCTGGGATTATCTCAAACTGGCCGGTGGCAGGGCGCAGACTCCACACGCTATCCAGGCCGCACTCGGTATGCAC
GCCGAACTGGCCAAGAGCGGGGATATGAAGAATACGAATTGGGCGGAGTATGCCAGATAA

Upstream 100 bases:

>100_bases
GCCGCGCTATTATCTGGGGAGAAATCCTGCAGCGAAAGTATTAAGTGATAAGTATTAACCAACAAATATCAACCGCATTT
AACGCGAAATTATACTATTT

Downstream 100 bases:

>100_bases
GGCATGAAACGTCTGTCGTTCATACTATCATTCATCGTTTGTATTTGCGTTGCAAATACAAACGATGTTTTTTCGCAAAA
AAGGGAACTGCAACAGTTCA

Product: putative coenzyme A transferase

Products: propionate; succinyl-CoA [C]

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSFNRISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTGASTGESCDGVMSRAKAIRYR
APYTTNSDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKVNVAIIEACEVTPDGKIYLTAAGGISPTICRLADQIIVELN
AAHSKSCMGLHDVYEPLDPPYRREIPIYKPSDRIGLPYIQVDPKKIVGVVETNWPDEARSFADADPLTDKIGQNVADFLA
ADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRIKFGSACSLTVTNDCLEGIYND
MDFFRDKLVLRPSEISNNPEVVRRLGIISINTAIEVDLYGNVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEG
KISAIVPMVSHLDHSEHSVNIIITEQGVADLRGKSPKERAQAIIENCAHPDYKQLLWDYLKLAGGRAQTPHAIQAALGMH
AELAKSGDMKNTNWAEYAR

Sequences:

>Translated_499_residues
MSFNRISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTGASTGESCDGVMSRAKAIRYR
APYTTNSDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKVNVAIIEACEVTPDGKIYLTAAGGISPTICRLADQIIVELN
AAHSKSCMGLHDVYEPLDPPYRREIPIYKPSDRIGLPYIQVDPKKIVGVVETNWPDEARSFADADPLTDKIGQNVADFLA
ADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRIKFGSACSLTVTNDCLEGIYND
MDFFRDKLVLRPSEISNNPEVVRRLGIISINTAIEVDLYGNVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEG
KISAIVPMVSHLDHSEHSVNIIITEQGVADLRGKSPKERAQAIIENCAHPDYKQLLWDYLKLAGGRAQTPHAIQAALGMH
AELAKSGDMKNTNWAEYAR
>Mature_498_residues
SFNRISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTGASTGESCDGVMSRAKAIRYRA
PYTTNSDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKVNVAIIEACEVTPDGKIYLTAAGGISPTICRLADQIIVELNA
AHSKSCMGLHDVYEPLDPPYRREIPIYKPSDRIGLPYIQVDPKKIVGVVETNWPDEARSFADADPLTDKIGQNVADFLAA
DMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRIKFGSACSLTVTNDCLEGIYNDM
DFFRDKLVLRPSEISNNPEVVRRLGIISINTAIEVDLYGNVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEGK
ISAIVPMVSHLDHSEHSVNIIITEQGVADLRGKSPKERAQAIIENCAHPDYKQLLWDYLKLAGGRAQTPHAIQAALGMHA
ELAKSGDMKNTNWAEYAR

Specific function: Unknown

COG id: COG0427

COG function: function code C; Acetyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]

Homologues:

Organism=Escherichia coli, GI1789287, Length=487, Percent_Identity=49.8973305954826, Blast_Score=516, Evalue=1e-147,
Organism=Caenorhabditis elegans, GI32563853, Length=229, Percent_Identity=30.5676855895196, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538151, Length=222, Percent_Identity=30.1801801801802, Blast_Score=75, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319456, Length=505, Percent_Identity=39.2079207920792, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI21358615, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003702
- InterPro:   IPR006472
- InterPro:   IPR017821 [H]

Pfam domain/function: PF02550 AcetylCoA_hydro; PF04223 CitF [H]

EC number: NA

Molecular weight: Translated: 54022; Mature: 53891

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNRISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTG
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
ASTGESCDGVMSRAKAIRYRAPYTTNSDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKV
CCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCC
NVAIIEACEVTPDGKIYLTAAGGISPTICRLADQIIVELNAAHSKSCMGLHDVYEPLDPP
EEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
YRREIPIYKPSDRIGLPYIQVDPKKIVGVVETNWPDEARSFADADPLTDKIGQNVADFLA
CCCCCCCCCCCCCCCCCEEEECHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHH
ADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRIK
HHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
FGSACSLTVTNDCLEGIYNDMDFFRDKLVLRPSEISNNPEVVRRLGIISINTAIEVDLYG
ECCEEEEEECHHHHHHHHHHHHHHHHHHEECCHHCCCCHHHHHHHCEEEECCEEEEEEEC
NVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEGKISAIVPMVSHLDHSEHSVN
CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEE
IIITEQGVADLRGKSPKERAQAIIENCAHPDYKQLLWDYLKLAGGRAQTPHAIQAALGMH
EEEECCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AELAKSGDMKNTNWAEYAR
HHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure 
SFNRISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
ASTGESCDGVMSRAKAIRYRAPYTTNSDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKV
CCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCC
NVAIIEACEVTPDGKIYLTAAGGISPTICRLADQIIVELNAAHSKSCMGLHDVYEPLDPP
EEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
YRREIPIYKPSDRIGLPYIQVDPKKIVGVVETNWPDEARSFADADPLTDKIGQNVADFLA
CCCCCCCCCCCCCCCCCEEEECHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHH
ADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRIK
HHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
FGSACSLTVTNDCLEGIYNDMDFFRDKLVLRPSEISNNPEVVRRLGIISINTAIEVDLYG
ECCEEEEEECHHHHHHHHHHHHHHHHHHEECCHHCCCCHHHHHHHCEEEECCEEEEEEEC
NVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEGKISAIVPMVSHLDHSEHSVN
CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEE
IIITEQGVADLRGKSPKERAQAIIENCAHPDYKQLLWDYLKLAGGRAQTPHAIQAALGMH
EEEECCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AELAKSGDMKNTNWAEYAR
HHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: propionyl-CoA; succinate [C]

Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]