| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348592
Identifier: 29348592
GI number: 29348592
Start: 4072459
End: 4072731
Strand: Reverse
Name: 29348592
Synonym: BT_3183
Alternate gene names: NA
Gene position: 4072731-4072459 (Counterclockwise)
Preceding gene: 29348593
Following gene: 29348590
Centisome position: 65.06
GC content: 37.36
Gene sequence:
>273_bases ATGAAAACATTAACTAGACTATTTATTCTTTTATTCGTTATGGCAGGTGTAAGTTCCTGCTATACAGGTATCCCATTGAA ACAAGGCAAATCGGAAAACAACCGAACTTACGAAGTCAGCTATTTGTTCGAGCATGACGGAGTCAAAGTCTATCGATTTA TGGATATGGGAAACTATGTGTACTTTACCACAAAGGGAGATGTGACCAGTATCAAAAATGACTCTACGAAAGAAAGGACT GTAACGATCTACAGAGATGATACAGTCAGATAA
Upstream 100 bases:
>100_bases TGGTCAACGTAGGATATCTGATTATGCGTCAGGCAATGGAACGCAAAGAAAGCCGCGGATTGCATTATACGATTGATTAT CCACACGCTAAAAAATAATC
Downstream 100 bases:
>100_bases TGAAATGTCTTAATAAATAAAAGTGCCGCTTGCAATCATATGCAAGCGGCACTTTTATTATCTAATAAACACCTCTTATT ATTAATAGTTTTCTTTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKTLTRLFILLFVMAGVSSCYTGIPLKQGKSENNRTYEVSYLFEHDGVKVYRFMDMGNYVYFTTKGDVTSIKNDSTKERT VTIYRDDTVR
Sequences:
>Translated_90_residues MKTLTRLFILLFVMAGVSSCYTGIPLKQGKSENNRTYEVSYLFEHDGVKVYRFMDMGNYVYFTTKGDVTSIKNDSTKERT VTIYRDDTVR >Mature_90_residues MKTLTRLFILLFVMAGVSSCYTGIPLKQGKSENNRTYEVSYLFEHDGVKVYRFMDMGNYVYFTTKGDVTSIKNDSTKERT VTIYRDDTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10456; Mature: 10456
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLTRLFILLFVMAGVSSCYTGIPLKQGKSENNRTYEVSYLFEHDGVKVYRFMDMGNYV CCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCEE YFTTKGDVTSIKNDSTKERTVTIYRDDTVR EEEECCCEEECCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKTLTRLFILLFVMAGVSSCYTGIPLKQGKSENNRTYEVSYLFEHDGVKVYRFMDMGNYV CCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCEE YFTTKGDVTSIKNDSTKERTVTIYRDDTVR EEEECCCEEECCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA