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The map label for this gene is yvdB [H]

Identifier: 29348590

GI number: 29348590

Start: 4069875

End: 4071554

Strand: Reverse

Name: yvdB [H]

Synonym: BT_3181

Alternate gene names: 29348590

Gene position: 4071554-4069875 (Counterclockwise)

Preceding gene: 29348592

Following gene: 29348582

Centisome position: 65.04

GC content: 45.95

Gene sequence:

>1680_bases
ATGAAGTTATTTGAATTTAAACCCAAATTGGTTTCTTGTTTAAAGAATTATTCGAAAGAAACGTTTATGGCGGACCTGAT
GGCAGGCGTCATTGTCGGCATCGTAGCACTTCCACTGGCCATCGCCTTCGGTATTGCTTCGGGAGTATCGCCCGAGAAAG
GTATTATCACTGCTATTATTGCCGGATTCATCATCTCTCTGCTGGGAGGAAGCAAAGTCCAGATCGGCGGACCGACAGGA
GCTTTCATTGTGATCATCTACGGCATCATCCAGCAATATGGCGAAGCCGGACTGATTGTGGCGACGCTTATGGCAGGTGT
TCTCCTTATATTATTAGGAGTGTTCAAGCTCGGAGCCGTTATCAAGTTTATTCCGTATCCCATTATCGTCGGTTTCACCA
GCGGTATTGCCGTTACCATTTTTACTACGCAGATTGCCGATATCTTCGGCCTGTCTTTCGGAGGTGAAAAAGTACCGGGA
GACTTTGTCGGGAAATGGATGATTTATTTCCGTCATTTCGATACCGTGAATTGGTGGAATACCATTGTAAGTATTGTCAG
CATCATTATCATTGCAATCACTCCCCGGTTTTCTAAAAAAATTCCCGGATCGCTGATTGCCATTATTGTAGTGACAGTGG
CCGTCTATCTGATGAAGACTTATGGCGGAATAGATTGCATTCCGACCATCGGCGACCGTTTCACCATTAAGTCAGAATTG
CCGGATGCCGTTGTACCGGCTTTGGATTGGGAAGCTATCAAAAATCTGTTTCCGGTAGCTATCACTATTGCAGTGCTGGG
AGCTATTGAATCACTCTTGTCTGCCACCGTAGCCGATGGTGTGATAGGCGACCGTCATGATTCCAACACGGAACTAATCG
CACAGGGTGCGGCAAATATCGTAGCGCCATTGTTCGGAGGTATCCCCGCTACCGGAGCTATTGCCCGTACGATGACGAAT
ATCAACAATGGAGGTAAGACGCCGATTGCAGGTATTATCCATGCGATTGTCCTTCTTCTGATTCTTCTTTTCCTGATGCC
GCTGGCACAGTATATTCCGATGGCTTGCCTTGCCGGAGTACTGGTCATCGTATCTTATAATATGAGCGGCTGGCGCGTCT
TCAAGGCTTTACTGAAGAATCCGAAATCCGATGTCACCGTACTGCTGATTACTTTCTTCCTCACTGTTATCTTCGACTTG
ACAGTTGCCATCGAAGTAGGACTGATCATCGCCTGCGTACTCTTCATGAAACGTGTCATGGAAACTACTGAAATCTCCGT
CATTACGGATGAGATCGACCCGAATAAAGAATCGGATATCGCCGTCAACGAAGAAAACATCATGATCCCTAAAGGAGTGG
AAGTATATGAGATCACCGGCCCTTACTTCTTCGGTATCGCTACAAAGTTCGAAGAAACGATGGCGCAGCTGGGAGACCGT
CCGAATGTACGCATCATCCGTATGCGTAAAGTTCCGTTCATCGACTCCACAGGTATTCATAATCTAACTACACTTTGCGA
AATGTCGCAGAAAGAAAAGATTACCGTCATTCTTTCCGGAGTCAATGAGAAAGTATATAAGGTACTGGAGAAATCCGGAT
TCTATGAATTGCTGGGAAAAGAAAATATCTGCCCGAACTTCAAGATAGCGCTGGATAGAGCGGAAGAAGTCATGAAATAA

Upstream 100 bases:

>100_bases
TCAAATAGCATGTTGCTAAACATACTTATCTCGATTATTTTGCGTAATTTTGCAACCTCTACTTTGCAAAAGAGCAAATT
ATATATAATAATTCACAGAA

Downstream 100 bases:

>100_bases
AGAGATTCCAACATAAAGAAAGAGCCATTTTATCTCCTGCTTTTCGGGATTAAAATGGCTCTTTTTATTTTAAGAGAGGA
GAGATTACCGCTCCACTAAA

Product: putative sulfate transporter, permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKLFEFKPKLVSCLKNYSKETFMADLMAGVIVGIVALPLAIAFGIASGVSPEKGIITAIIAGFIISLLGGSKVQIGGPTG
AFIVIIYGIIQQYGEAGLIVATLMAGVLLILLGVFKLGAVIKFIPYPIIVGFTSGIAVTIFTTQIADIFGLSFGGEKVPG
DFVGKWMIYFRHFDTVNWWNTIVSIVSIIIIAITPRFSKKIPGSLIAIIVVTVAVYLMKTYGGIDCIPTIGDRFTIKSEL
PDAVVPALDWEAIKNLFPVAITIAVLGAIESLLSATVADGVIGDRHDSNTELIAQGAANIVAPLFGGIPATGAIARTMTN
INNGGKTPIAGIIHAIVLLLILLFLMPLAQYIPMACLAGVLVIVSYNMSGWRVFKALLKNPKSDVTVLLITFFLTVIFDL
TVAIEVGLIIACVLFMKRVMETTEISVITDEIDPNKESDIAVNEENIMIPKGVEVYEITGPYFFGIATKFEETMAQLGDR
PNVRIIRMRKVPFIDSTGIHNLTTLCEMSQKEKITVILSGVNEKVYKVLEKSGFYELLGKENICPNFKIALDRAEEVMK

Sequences:

>Translated_559_residues
MKLFEFKPKLVSCLKNYSKETFMADLMAGVIVGIVALPLAIAFGIASGVSPEKGIITAIIAGFIISLLGGSKVQIGGPTG
AFIVIIYGIIQQYGEAGLIVATLMAGVLLILLGVFKLGAVIKFIPYPIIVGFTSGIAVTIFTTQIADIFGLSFGGEKVPG
DFVGKWMIYFRHFDTVNWWNTIVSIVSIIIIAITPRFSKKIPGSLIAIIVVTVAVYLMKTYGGIDCIPTIGDRFTIKSEL
PDAVVPALDWEAIKNLFPVAITIAVLGAIESLLSATVADGVIGDRHDSNTELIAQGAANIVAPLFGGIPATGAIARTMTN
INNGGKTPIAGIIHAIVLLLILLFLMPLAQYIPMACLAGVLVIVSYNMSGWRVFKALLKNPKSDVTVLLITFFLTVIFDL
TVAIEVGLIIACVLFMKRVMETTEISVITDEIDPNKESDIAVNEENIMIPKGVEVYEITGPYFFGIATKFEETMAQLGDR
PNVRIIRMRKVPFIDSTGIHNLTTLCEMSQKEKITVILSGVNEKVYKVLEKSGFYELLGKENICPNFKIALDRAEEVMK
>Mature_559_residues
MKLFEFKPKLVSCLKNYSKETFMADLMAGVIVGIVALPLAIAFGIASGVSPEKGIITAIIAGFIISLLGGSKVQIGGPTG
AFIVIIYGIIQQYGEAGLIVATLMAGVLLILLGVFKLGAVIKFIPYPIIVGFTSGIAVTIFTTQIADIFGLSFGGEKVPG
DFVGKWMIYFRHFDTVNWWNTIVSIVSIIIIAITPRFSKKIPGSLIAIIVVTVAVYLMKTYGGIDCIPTIGDRFTIKSEL
PDAVVPALDWEAIKNLFPVAITIAVLGAIESLLSATVADGVIGDRHDSNTELIAQGAANIVAPLFGGIPATGAIARTMTN
INNGGKTPIAGIIHAIVLLLILLFLMPLAQYIPMACLAGVLVIVSYNMSGWRVFKALLKNPKSDVTVLLITFFLTVIFDL
TVAIEVGLIIACVLFMKRVMETTEISVITDEIDPNKESDIAVNEENIMIPKGVEVYEITGPYFFGIATKFEETMAQLGDR
PNVRIIRMRKVPFIDSTGIHNLTTLCEMSQKEKITVILSGVNEKVYKVLEKSGFYELLGKENICPNFKIALDRAEEVMK

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI94721259, Length=479, Percent_Identity=23.1732776617954, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI94721255, Length=479, Percent_Identity=23.1732776617954, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI94721253, Length=479, Percent_Identity=23.1732776617954, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI94721257, Length=479, Percent_Identity=23.1732776617954, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI45827800, Length=510, Percent_Identity=22.9411764705882, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI39752683, Length=510, Percent_Identity=22.9411764705882, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI100913030, Length=626, Percent_Identity=23.0031948881789, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI20336282, Length=559, Percent_Identity=23.613595706619, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI16306483, Length=559, Percent_Identity=23.613595706619, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4557535, Length=521, Percent_Identity=22.4568138195777, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI45827802, Length=439, Percent_Identity=23.2346241457859, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI269784651, Length=594, Percent_Identity=21.3804713804714, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI47131207, Length=521, Percent_Identity=21.6890595009597, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI20336272, Length=521, Percent_Identity=21.6890595009597, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4505697, Length=520, Percent_Identity=23.8461538461538, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI262206105, Length=149, Percent_Identity=32.8859060402685, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI262206075, Length=149, Percent_Identity=32.8859060402685, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI262206069, Length=149, Percent_Identity=32.8859060402685, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI262206063, Length=149, Percent_Identity=32.8859060402685, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI16418457, Length=487, Percent_Identity=22.7926078028747, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI301601599, Length=487, Percent_Identity=22.7926078028747, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87081859, Length=567, Percent_Identity=35.2733686067019, Blast_Score=315, Evalue=7e-87,
Organism=Caenorhabditis elegans, GI86565215, Length=553, Percent_Identity=28.2097649186257, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI86564196, Length=615, Percent_Identity=22.7642276422764, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI193203292, Length=504, Percent_Identity=21.4285714285714, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17551690, Length=594, Percent_Identity=21.7171717171717, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17566848, Length=578, Percent_Identity=23.1833910034602, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI86564876, Length=401, Percent_Identity=21.4463840399002, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=531, Percent_Identity=23.3521657250471, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86565211, Length=245, Percent_Identity=29.3877551020408, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI86565209, Length=245, Percent_Identity=29.3877551020408, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319771, Length=507, Percent_Identity=22.879684418146, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325260, Length=454, Percent_Identity=23.568281938326, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321564, Length=493, Percent_Identity=19.8782961460446, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85815873, Length=435, Percent_Identity=25.2873563218391, Blast_Score=137, Evalue=3e-32,
Organism=Drosophila melanogaster, GI19922482, Length=422, Percent_Identity=25.1184834123223, Blast_Score=126, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24647160, Length=430, Percent_Identity=26.2790697674419, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI21355087, Length=430, Percent_Identity=26.2790697674419, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24651449, Length=439, Percent_Identity=23.4624145785877, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24649801, Length=470, Percent_Identity=24.0425531914894, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI21358229, Length=458, Percent_Identity=25.1091703056769, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24663084, Length=449, Percent_Identity=26.7260579064588, Blast_Score=116, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21357695, Length=449, Percent_Identity=26.7260579064588, Blast_Score=116, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21358633, Length=574, Percent_Identity=22.6480836236934, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24666186, Length=276, Percent_Identity=26.0869565217391, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 60419; Mature: 60419

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]