Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348557

Identifier: 29348557

GI number: 29348557

Start: 4012482

End: 4013774

Strand: Reverse

Name: 29348557

Synonym: BT_3148

Alternate gene names: NA

Gene position: 4013774-4012482 (Counterclockwise)

Preceding gene: 29348558

Following gene: 29348556

Centisome position: 64.11

GC content: 52.59

Gene sequence:

>1293_bases
ATGCTGGTCATGTTCGTGTGGCTGACAGCCTGCAACCGTGACCCGCACGAGGGAGAGAGGGGGTTGACCGTAGCCATCGA
CAACACCCAATGTCCAGACGTGCCCATCGGAGCAATCAAGCTCTACATCTACGGCACGGGGGGAAACCTCTACGCCACCT
ACAACTATGCGGACGCACGGGGCATTGCTTCCGTCCTGCATCCCTTAGAAGCCGGACACTACACGGTAGCGGTGGTCATC
AATGCGGACGAAGAAGCGGCGGAGACCTCCACCCTCACTGCCCTGCACGAGTGGTTAGAGATAGAGATGAGCCACGAGAC
CAACCTGCTTTCGGGCATAGCGGAGGTGAATGTGACGGAGGACGGCATCAGCCCTGTCACCGTCTTCCTGCAGCGGGGTG
TTTTCACGCTGTCCACGCTCCGTCTGCAGCTCACGCTGCCCGCCCCGAAACTGCCGGATTACACACCAGAGAAGAGCAAG
ACTCGTGCCGCCGGAACCGCCAATACAATAAGGTGTGTGGCAGAACTCTGCAAGGCAGGCACGGACATCGTGGTGCTTCA
CAAAGCCGTGACACCCGTCCCGCAAGCTGACGGCACATATCTCGTGGAGCTTGAATTGGCAGAAGGCTCTTACGACCTGC
GCCTGTGGACGGACTATGCCCGCGCTGACAATCCGCTTGCCGACACATTTTATCATACGGAAAGCCTGAAAGCAGTGACC
ATCGTCACGAAGCCATACACGGCGAACACCGATGCCAAGGATGCGGCGTACTATAACAAAAGTGACATCACGTTGTCCAA
AGAGGGCGCAACAATGAATGTGCAACTCCAACGCCCATTGGCAAAGTACCGCCTCATAGCCAAAGACGTAGAAAACTACC
GCAAGCTGATGGAAGCGAAGCCAGATATATACCCCCCGTTGAAGAATCTGACGGTAAAGGTTCTGTATGAGGGATATTTC
CCCTCTGGATTTAATGTTTCTACAGGAAAACCAAATGATGCCGTAGGTGGTATAAGTTACTCGCAGGTATCACTTCATTA
TAATGATGTTGACAATGAGGTTTTGTTAGGCGGCGATTGGGTGTTGGTAAATGGAACAGAGTCACTTGTCAATGTTACAG
TTACCGTAACCGACAACCTTGGCAATACGTTATGTCGTGCTTCGGGTGTTAAGATAAATTACCGAAATAGCCACCTTACG
ACAGTGTATGGCAATTTTCTTACGGCTGGCATCAACAAGGGCGGCATCGACATAAATACCGAATGGAGCGGAATATACAA
TGTGTGGTTTTAA

Upstream 100 bases:

>100_bases
TCATTCCTCTATGGGGCAGCCGTGCCGTGACTGAAAAAGAAATAAAGTAGAACCAAAGACGATGAATACGAAAAGAAGAT
ACATCTATCTGAAGATATGT

Downstream 100 bases:

>100_bases
GTAACAAGTAAATATACAATTAGAAAATTAAATATACAATTAGAAAATGATTAAAAAAGTTTTTTTGATGCTGGGCATCG
CAGCGATGCTGGCATCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLVMFVWLTACNRDPHEGERGLTVAIDNTQCPDVPIGAIKLYIYGTGGNLYATYNYADARGIASVLHPLEAGHYTVAVVI
NADEEAAETSTLTALHEWLEIEMSHETNLLSGIAEVNVTEDGISPVTVFLQRGVFTLSTLRLQLTLPAPKLPDYTPEKSK
TRAAGTANTIRCVAELCKAGTDIVVLHKAVTPVPQADGTYLVELELAEGSYDLRLWTDYARADNPLADTFYHTESLKAVT
IVTKPYTANTDAKDAAYYNKSDITLSKEGATMNVQLQRPLAKYRLIAKDVENYRKLMEAKPDIYPPLKNLTVKVLYEGYF
PSGFNVSTGKPNDAVGGISYSQVSLHYNDVDNEVLLGGDWVLVNGTESLVNVTVTVTDNLGNTLCRASGVKINYRNSHLT
TVYGNFLTAGINKGGIDINTEWSGIYNVWF

Sequences:

>Translated_430_residues
MLVMFVWLTACNRDPHEGERGLTVAIDNTQCPDVPIGAIKLYIYGTGGNLYATYNYADARGIASVLHPLEAGHYTVAVVI
NADEEAAETSTLTALHEWLEIEMSHETNLLSGIAEVNVTEDGISPVTVFLQRGVFTLSTLRLQLTLPAPKLPDYTPEKSK
TRAAGTANTIRCVAELCKAGTDIVVLHKAVTPVPQADGTYLVELELAEGSYDLRLWTDYARADNPLADTFYHTESLKAVT
IVTKPYTANTDAKDAAYYNKSDITLSKEGATMNVQLQRPLAKYRLIAKDVENYRKLMEAKPDIYPPLKNLTVKVLYEGYF
PSGFNVSTGKPNDAVGGISYSQVSLHYNDVDNEVLLGGDWVLVNGTESLVNVTVTVTDNLGNTLCRASGVKINYRNSHLT
TVYGNFLTAGINKGGIDINTEWSGIYNVWF
>Mature_430_residues
MLVMFVWLTACNRDPHEGERGLTVAIDNTQCPDVPIGAIKLYIYGTGGNLYATYNYADARGIASVLHPLEAGHYTVAVVI
NADEEAAETSTLTALHEWLEIEMSHETNLLSGIAEVNVTEDGISPVTVFLQRGVFTLSTLRLQLTLPAPKLPDYTPEKSK
TRAAGTANTIRCVAELCKAGTDIVVLHKAVTPVPQADGTYLVELELAEGSYDLRLWTDYARADNPLADTFYHTESLKAVT
IVTKPYTANTDAKDAAYYNKSDITLSKEGATMNVQLQRPLAKYRLIAKDVENYRKLMEAKPDIYPPLKNLTVKVLYEGYF
PSGFNVSTGKPNDAVGGISYSQVSLHYNDVDNEVLLGGDWVLVNGTESLVNVTVTVTDNLGNTLCRASGVKINYRNSHLT
TVYGNFLTAGINKGGIDINTEWSGIYNVWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47105; Mature: 47105

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVMFVWLTACNRDPHEGERGLTVAIDNTQCPDVPIGAIKLYIYGTGGNLYATYNYADAR
CEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHH
GIASVLHPLEAGHYTVAVVINADEEAAETSTLTALHEWLEIEMSHETNLLSGIAEVNVTE
HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHEEEEECC
DGISPVTVFLQRGVFTLSTLRLQLTLPAPKLPDYTPEKSKTRAAGTANTIRCVAELCKAG
CCCCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
TDIVVLHKAVTPVPQADGTYLVELELAEGSYDLRLWTDYARADNPLADTFYHTESLKAVT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCHHHEEECCCCEEEE
IVTKPYTANTDAKDAAYYNKSDITLSKEGATMNVQLQRPLAKYRLIAKDVENYRKLMEAK
EEECCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDIYPPLKNLTVKVLYEGYFPSGFNVSTGKPNDAVGGISYSQVSLHYNDVDNEVLLGGDW
CCCCCCHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCE
VLVNGTESLVNVTVTVTDNLGNTLCRASGVKINYRNSHLTTVYGNFLTAGINKGGIDINT
EEECCCCCEEEEEEEEECCCCCHHHHHCCCEEEECCCEEEEEECCEEEECCCCCCEEEEC
EWSGIYNVWF
CCCCEEEECC
>Mature Secondary Structure
MLVMFVWLTACNRDPHEGERGLTVAIDNTQCPDVPIGAIKLYIYGTGGNLYATYNYADAR
CEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHH
GIASVLHPLEAGHYTVAVVINADEEAAETSTLTALHEWLEIEMSHETNLLSGIAEVNVTE
HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHEEEEECC
DGISPVTVFLQRGVFTLSTLRLQLTLPAPKLPDYTPEKSKTRAAGTANTIRCVAELCKAG
CCCCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
TDIVVLHKAVTPVPQADGTYLVELELAEGSYDLRLWTDYARADNPLADTFYHTESLKAVT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCHHHEEECCCCEEEE
IVTKPYTANTDAKDAAYYNKSDITLSKEGATMNVQLQRPLAKYRLIAKDVENYRKLMEAK
EEECCCCCCCCCCCCEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDIYPPLKNLTVKVLYEGYFPSGFNVSTGKPNDAVGGISYSQVSLHYNDVDNEVLLGGDW
CCCCCCHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCE
VLVNGTESLVNVTVTVTDNLGNTLCRASGVKINYRNSHLTTVYGNFLTAGINKGGIDINT
EEECCCCCEEEEEEEEECCCCCHHHHHCCCEEEECCCEEEEEECCEEEECCCCCCEEEEC
EWSGIYNVWF
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA