Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348556

Identifier: 29348556

GI number: 29348556

Start: 4011248

End: 4012414

Strand: Reverse

Name: 29348556

Synonym: BT_3147

Alternate gene names: NA

Gene position: 4012414-4011248 (Counterclockwise)

Preceding gene: 29348557

Following gene: 29348555

Centisome position: 64.09

GC content: 43.7

Gene sequence:

>1167_bases
ATGCTGGGCATCGCAGCGATGCTGGCATCGTGCAGTCAGAACGAGGAGTTGTTTACCGACAAGGGAAACAACACAGTACA
ACAGATGACTTTCACACTCGCAACCGACGAGAAGCCCCAAACACGAGCTGCCACGGATGGCTTGCGTTATGTGGTTGCTG
TCTATGATGAGACTGGTAAGACAGAAGTAAAGCAGGAAACAACTTTCGAAAACAACTGCTTTACCATCTTGTTGCATCCG
GGTACATACAAGTGTCTTTTTTGGGCAGACCATGGCAGTACGAACTATGACGCAACGGACTTGAAAAGTGTGAAAGACTT
GAAAAGCACTAAGGCAGATGCCAATGCCGAGGCTTTTTATGCAAGCCAATCGGTTAAAGTCAGCAATGGCAATCATGTAA
ACGTCACGCTGAATCGTGCTGTAGCCAAAGTGATTTTGAGGGAAACCGATGAGTTGGAGACTGGAAGCATGACCGTGACT
TATAGCCGCCCAACGAGCTTCAATGTGGCAGACGGTAAGACAACAGGGACAGAATCTGACACCAAGACACTGTCCATCAA
AAAAGAAATACAAGGGACAACCGATTCTCCTGTGGAAATAGGCAGTTTCTACGTGTTGGCAAGTGCGGATGAGGCAAACC
TTGACAATTTCATTACACAGCACAATGAAGAAGAAAAAAAGACGATAAGTAATGTACCCGTACAAGCTAACTATCAGACT
TACATCACAGGAAGGTATGGCGCAAAGGTCAACCAGCAATTCTTTATAGATGTCAATACCACCTGGAGTACTTCGGACAA
GGAAGGTAAGTTGCTGAATGTTAATGTTAATGTTAATGATAACTACACACTTGTCAAGGATAACGTCAGTTATGACTGCA
TCGTTTTCTCTTCTACCGGCACTTCTGCCATCGTAGTCTGCAAGACCAAACAGGCGAGAGCTGAAAACAAAGAGGCAGCC
GCAACAAAGGCAGAGGCTATCGGAGGACGGCTCGTCACCTTTGCAGAATTTAAACTTTTATGTGATGCAGGGCTAATAAA
AGATTCTACTGCTGATTATTATTGTTTTGATTATGGACGATGCTGGTATCTTCATGGTCAAAGTGGTCATGACGGTTTAG
TAGAAAAAAATCTAGATTATTATGTAGCTTTTGATATAACAAAATAA

Upstream 100 bases:

>100_bases
GAATGGAGCGGAATATACAATGTGTGGTTTTAAGTAACAAGTAAATATACAATTAGAAAATTAAATATACAATTAGAAAA
TGATTAAAAAAGTTTTTTTG

Downstream 100 bases:

>100_bases
ATAATCATGCGTGGACGGAGTATCCGTCCACGTCTGACACATTCAATAATTTTAAACGTAAACAATTATGAATGATTTCA
AGAATCAATGGCTCAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MLGIAAMLASCSQNEELFTDKGNNTVQQMTFTLATDEKPQTRAATDGLRYVVAVYDETGKTEVKQETTFENNCFTILLHP
GTYKCLFWADHGSTNYDATDLKSVKDLKSTKADANAEAFYASQSVKVSNGNHVNVTLNRAVAKVILRETDELETGSMTVT
YSRPTSFNVADGKTTGTESDTKTLSIKKEIQGTTDSPVEIGSFYVLASADEANLDNFITQHNEEEKKTISNVPVQANYQT
YITGRYGAKVNQQFFIDVNTTWSTSDKEGKLLNVNVNVNDNYTLVKDNVSYDCIVFSSTGTSAIVVCKTKQARAENKEAA
ATKAEAIGGRLVTFAEFKLLCDAGLIKDSTADYYCFDYGRCWYLHGQSGHDGLVEKNLDYYVAFDITK

Sequences:

>Translated_388_residues
MLGIAAMLASCSQNEELFTDKGNNTVQQMTFTLATDEKPQTRAATDGLRYVVAVYDETGKTEVKQETTFENNCFTILLHP
GTYKCLFWADHGSTNYDATDLKSVKDLKSTKADANAEAFYASQSVKVSNGNHVNVTLNRAVAKVILRETDELETGSMTVT
YSRPTSFNVADGKTTGTESDTKTLSIKKEIQGTTDSPVEIGSFYVLASADEANLDNFITQHNEEEKKTISNVPVQANYQT
YITGRYGAKVNQQFFIDVNTTWSTSDKEGKLLNVNVNVNDNYTLVKDNVSYDCIVFSSTGTSAIVVCKTKQARAENKEAA
ATKAEAIGGRLVTFAEFKLLCDAGLIKDSTADYYCFDYGRCWYLHGQSGHDGLVEKNLDYYVAFDITK
>Mature_388_residues
MLGIAAMLASCSQNEELFTDKGNNTVQQMTFTLATDEKPQTRAATDGLRYVVAVYDETGKTEVKQETTFENNCFTILLHP
GTYKCLFWADHGSTNYDATDLKSVKDLKSTKADANAEAFYASQSVKVSNGNHVNVTLNRAVAKVILRETDELETGSMTVT
YSRPTSFNVADGKTTGTESDTKTLSIKKEIQGTTDSPVEIGSFYVLASADEANLDNFITQHNEEEKKTISNVPVQANYQT
YITGRYGAKVNQQFFIDVNTTWSTSDKEGKLLNVNVNVNDNYTLVKDNVSYDCIVFSSTGTSAIVVCKTKQARAENKEAA
ATKAEAIGGRLVTFAEFKLLCDAGLIKDSTADYYCFDYGRCWYLHGQSGHDGLVEKNLDYYVAFDITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42798; Mature: 42798

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIAAMLASCSQNEELFTDKGNNTVQQMTFTLATDEKPQTRAATDGLRYVVAVYDETGK
CCCHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCCHHHCCCEEEEEEEEECCCC
TEVKQETTFENNCFTILLHPGTYKCLFWADHGSTNYDATDLKSVKDLKSTKADANAEAFY
CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
ASQSVKVSNGNHVNVTLNRAVAKVILRETDELETGSMTVTYSRPTSFNVADGKTTGTESD
EECEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCC
TKTLSIKKEIQGTTDSPVEIGSFYVLASADEANLDNFITQHNEEEKKTISNVPVQANYQT
CEEEEEEHHCCCCCCCCEEECEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEECCEE
YITGRYGAKVNQQFFIDVNTTWSTSDKEGKLLNVNVNVNDNYTLVKDNVSYDCIVFSSTG
EEEEECCCCCCCEEEEEEECEECCCCCCCCEEEEEEEECCCEEEEECCCCEEEEEEECCC
TSAIVVCKTKQARAENKEAAATKAEAIGGRLVTFAEFKLLCDAGLIKDSTADYYCFDYGR
CEEEEEEECCHHCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCEECCCCCEEEEECCE
CWYLHGQSGHDGLVEKNLDYYVAFDITK
EEEEECCCCCCCCEECCCCEEEEEEECC
>Mature Secondary Structure
MLGIAAMLASCSQNEELFTDKGNNTVQQMTFTLATDEKPQTRAATDGLRYVVAVYDETGK
CCCHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCCHHHCCCEEEEEEEEECCCC
TEVKQETTFENNCFTILLHPGTYKCLFWADHGSTNYDATDLKSVKDLKSTKADANAEAFY
CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
ASQSVKVSNGNHVNVTLNRAVAKVILRETDELETGSMTVTYSRPTSFNVADGKTTGTESD
EECEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCC
TKTLSIKKEIQGTTDSPVEIGSFYVLASADEANLDNFITQHNEEEKKTISNVPVQANYQT
CEEEEEEHHCCCCCCCCEEECEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEECCEE
YITGRYGAKVNQQFFIDVNTTWSTSDKEGKLLNVNVNVNDNYTLVKDNVSYDCIVFSSTG
EEEEECCCCCCCEEEEEEECEECCCCCCCCEEEEEEEECCCEEEEECCCCEEEEEEECCC
TSAIVVCKTKQARAENKEAAATKAEAIGGRLVTFAEFKLLCDAGLIKDSTADYYCFDYGR
CEEEEEEECCHHCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCEECCCCCEEEEECCE
CWYLHGQSGHDGLVEKNLDYYVAFDITK
EEEEECCCCCCCCEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA