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The map label for this gene is ybfH [H]

Identifier: 29348532

GI number: 29348532

Start: 3980272

End: 3981147

Strand: Reverse

Name: ybfH [H]

Synonym: BT_3123

Alternate gene names: 29348532

Gene position: 3981147-3980272 (Counterclockwise)

Preceding gene: 29348533

Following gene: 29348531

Centisome position: 63.59

GC content: 45.09

Gene sequence:

>876_bases
ATGGAACTAAAGCATGGGTACTATCATCTGATTGCCATACTAACAGTAGCTATCTGGGGACTGACATTCATTTCGACTAA
AGTATTGATAAACCACGGGCTGACACCTCAGGAAATCTTCTTTTACCGTTTTCTGATTGCATACCTTGGCATCTGGGTAA
TTTCTCCCAAACGTCTGTTCACCAATAACTGGCAAGATGAACTGTGGCTGGTAGCAGGCGGTATATTCGGTGGCTCCCTT
TATTTCTTTACAGAGAATACCGCTTTAGGCATCACCCAGGCGTCGAATGTATCGTTTATCATCTGCACGGCTCCCTTGCT
GACTACTATCCTTTCCCTGCTTTTCTATAAAAGTGAAAAGGCATCGAAAGGACTGATATACGGTTCCCTGCTGGCATTGA
TGGGGGTAGGGCTAATTGTCTTTAACGGCAGTTTTGTGCTCAAAATATCTCCGATAGGCGATCTGCTGACTTTGCTTGCC
GCATTATCATGGGCATTCTATAGTCTGATTATTAAAAAGATGGCCGGGCGTTATCCTACCATATTTATCACCCGCAAGAT
TTTCTTTTACGGAGTACTGACGATTCTGCCTGCCTTCCTCCTGCATCCCCTGCATCCCGATACCGCTGTACTTCTTCAAC
CTGCCGTTCTGTTCAACCTTCTGTTTCTGGCCGTATTGGCTTCGCTGATCTGCTATGTACTCTGGAATGTGGTGTTAAAA
CAGTTGGGAACGGTACGGGCATCCAATTATATTTATCTCAATCCTCTGGTCACGATGATTGCATCGTTCCTTATTCTGGA
TGAGAAGATTACGTTAGTCGCTTTAGGCGGCGCAGCTTGTATTGTCTGCGGGGTATATTGGGCTGAAAAGAAATAG

Upstream 100 bases:

>100_bases
GGTTCTCTTTCGGCGAAATTTTGTTGAAAATATATCTATCAAAGTCAGTGGGTATATCCATGAATCCCTGTATCTTTGCA
TTCTCATTAAAACCATAATT

Downstream 100 bases:

>100_bases
AGTAGATAAGAAATAGAGTAGATTATGAGAAAAATGATGAATGAGCAGCTTCCTATATCGAAGTCATCTCCTCTGAAAGC
TCGTTTTTATGATTATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MELKHGYYHLIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLFTNNWQDELWLVAGGIFGGSL
YFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEKASKGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLA
ALSWAFYSLIIKKMAGRYPTIFITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLK
QLGTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVYWAEKK

Sequences:

>Translated_291_residues
MELKHGYYHLIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLFTNNWQDELWLVAGGIFGGSL
YFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEKASKGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLA
ALSWAFYSLIIKKMAGRYPTIFITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLK
QLGTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVYWAEKK
>Mature_291_residues
MELKHGYYHLIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLFTNNWQDELWLVAGGIFGGSL
YFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEKASKGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLA
ALSWAFYSLIIKKMAGRYPTIFITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLK
QLGTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVYWAEKK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=275, Percent_Identity=24, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32345; Mature: 32345

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKHGYYHLIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
TNNWQDELWLVAGGIFGGSLYFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEK
HCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCC
ASKGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLAALSWAFYSLIIKKMAGRYPT
CCCCHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IFITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLK
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVYWAEKK
HHCCHHCCCEEEECHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MELKHGYYHLIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
TNNWQDELWLVAGGIFGGSLYFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEK
HCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCC
ASKGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLAALSWAFYSLIIKKMAGRYPT
CCCCHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IFITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLK
EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVYWAEKK
HHCCHHCCCEEEECHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]