| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348459
Identifier: 29348459
GI number: 29348459
Start: 3868574
End: 3869539
Strand: Reverse
Name: 29348459
Synonym: BT_3050
Alternate gene names: NA
Gene position: 3869539-3868574 (Counterclockwise)
Preceding gene: 29348466
Following gene: 29348457
Centisome position: 61.81
GC content: 45.86
Gene sequence:
>966_bases ATGCTACTACCAAGAAAAATTGTATTTTTCCTTCTCTTGTTTGTCGGATTATCGTTGTATGCGCAACAAAACTGCTTCAT TAGTTCGTATGTACGGGGTAATTTCTACAATCGCGGACGTATTTCTGCCGAGAGTTTAAGGGCGAGTGATGATTTGATTT TTCTGAACGTCCGTCCCAATAAAGACGGGTCGCTTTCGTTTGAGAATCCCCGTATCTTTGAGAATGGGAAAGGAGTGACT AGTTGGGAGGAATTGATAAAGTCTGTCCGTGCGGATGTGAAAGGAACAAAGACAAAACTTCGTCTGGGCGCTGCCAGTGG CGAGTGGAAAGCGATGGTTGCAGATGAGGCGGCCCGTGTTGCATTTGCCAAAAACATAAAGAAGATACTGGAAAAGAATA AGCTCGATGGCATCGATCTGGATTTTGAATGGGCGGAGACTGAAAAAGAGTATGAAGATTACAGTCTGGCTATTCTGAAG ATGAGAGAGGTATTGGGAGATAAATATGTGTTCAGCGTATCCCTGCATCCTGTGTGTTATAAGATTAGTAAAGAGGCGAT TGCTGCGGTCGATTTCATTTCTTATCAGTGTTACGGTCCTTCGCCGGTTCGCTTCCCGATGGAGAAATACTGTTCGGATA TACAGATGGCGTTGGCTTATGGCATTCCAAAGGAAAAGCTGGTGGCAGGCGTTCCTTTCTATGGCGTGACAAAAGATGGC TCAAAGAAGACTGAGGCTTACTTCAGTTTTGTGCAGGACGGGCTGATTACGGGGCCGGCACAAAACGAAGTAACCTATAA AGGAGACGTGTATGTCTTTGACGGGCAAAATAATATCCGTGCCAAGACACGTTATGCGATGGACCAGCAGCTCAAAGGAA TGATGAGCTGGGACTTGGCTACGGATATGCCGCTGAATGACAGCAGATCGTTGTTTAAGACGATGGTGGAGGAGTTGGGG AGGTGA
Upstream 100 bases:
>100_bases CTTTATGTTGATTTTTGGAAGTATTATAGTGATTTTTGAACATTTGTTTTCTTTGCCTGTACCTACTTTTGCGATCAAAA CCCATTAATTATCAATTATT
Downstream 100 bases:
>100_bases ACTGCTTCAGATAATCTGAAGGAGAGACACCAAACTCATCCTTAAAACATTGACGGAAGTAGCCTGTACTGTTCATTCCT ATTTTATAGGCTATTTCCGA
Product: chitinase
Products: NA
Alternate protein names: Glycoside Hydrolase Family
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLLPRKIVFFLLLFVGLSLYAQQNCFISSYVRGNFYNRGRISAESLRASDDLIFLNVRPNKDGSLSFENPRIFENGKGVT SWEELIKSVRADVKGTKTKLRLGAASGEWKAMVADEAARVAFAKNIKKILEKNKLDGIDLDFEWAETEKEYEDYSLAILK MREVLGDKYVFSVSLHPVCYKISKEAIAAVDFISYQCYGPSPVRFPMEKYCSDIQMALAYGIPKEKLVAGVPFYGVTKDG SKKTEAYFSFVQDGLITGPAQNEVTYKGDVYVFDGQNNIRAKTRYAMDQQLKGMMSWDLATDMPLNDSRSLFKTMVEELG R
Sequences:
>Translated_321_residues MLLPRKIVFFLLLFVGLSLYAQQNCFISSYVRGNFYNRGRISAESLRASDDLIFLNVRPNKDGSLSFENPRIFENGKGVT SWEELIKSVRADVKGTKTKLRLGAASGEWKAMVADEAARVAFAKNIKKILEKNKLDGIDLDFEWAETEKEYEDYSLAILK MREVLGDKYVFSVSLHPVCYKISKEAIAAVDFISYQCYGPSPVRFPMEKYCSDIQMALAYGIPKEKLVAGVPFYGVTKDG SKKTEAYFSFVQDGLITGPAQNEVTYKGDVYVFDGQNNIRAKTRYAMDQQLKGMMSWDLATDMPLNDSRSLFKTMVEELG R >Mature_321_residues MLLPRKIVFFLLLFVGLSLYAQQNCFISSYVRGNFYNRGRISAESLRASDDLIFLNVRPNKDGSLSFENPRIFENGKGVT SWEELIKSVRADVKGTKTKLRLGAASGEWKAMVADEAARVAFAKNIKKILEKNKLDGIDLDFEWAETEKEYEDYSLAILK MREVLGDKYVFSVSLHPVCYKISKEAIAAVDFISYQCYGPSPVRFPMEKYCSDIQMALAYGIPKEKLVAGVPFYGVTKDG SKKTEAYFSFVQDGLITGPAQNEVTYKGDVYVFDGQNNIRAKTRYAMDQQLKGMMSWDLATDMPLNDSRSLFKTMVEELG R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36323; Mature: 36323
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPRKIVFFLLLFVGLSLYAQQNCFISSYVRGNFYNRGRISAESLRASDDLIFLNVRPN CCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECC KDGSLSFENPRIFENGKGVTSWEELIKSVRADVKGTKTKLRLGAASGEWKAMVADEAARV CCCCEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHHHH AFAKNIKKILEKNKLDGIDLDFEWAETEKEYEDYSLAILKMREVLGDKYVFSVSLHPVCY HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH KISKEAIAAVDFISYQCYGPSPVRFPMEKYCSDIQMALAYGIPKEKLVAGVPFYGVTKDG HHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCEEECCCC SKKTEAYFSFVQDGLITGPAQNEVTYKGDVYVFDGQNNIRAKTRYAMDQQLKGMMSWDLA CHHHHHHHHHHHCCCEECCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC TDMPLNDSRSLFKTMVEELGR CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLLPRKIVFFLLLFVGLSLYAQQNCFISSYVRGNFYNRGRISAESLRASDDLIFLNVRPN CCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECC KDGSLSFENPRIFENGKGVTSWEELIKSVRADVKGTKTKLRLGAASGEWKAMVADEAARV CCCCEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEHHHHHHH AFAKNIKKILEKNKLDGIDLDFEWAETEKEYEDYSLAILKMREVLGDKYVFSVSLHPVCY HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH KISKEAIAAVDFISYQCYGPSPVRFPMEKYCSDIQMALAYGIPKEKLVAGVPFYGVTKDG HHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCEEECCCC SKKTEAYFSFVQDGLITGPAQNEVTYKGDVYVFDGQNNIRAKTRYAMDQQLKGMMSWDLA CHHHHHHHHHHHCCCEECCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC TDMPLNDSRSLFKTMVEELGR CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA