Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348457

Identifier: 29348457

GI number: 29348457

Start: 3861603

End: 3864290

Strand: Reverse

Name: 29348457

Synonym: BT_3048

Alternate gene names: NA

Gene position: 3864290-3861603 (Counterclockwise)

Preceding gene: 29348459

Following gene: 29348456

Centisome position: 61.73

GC content: 43.75

Gene sequence:

>2688_bases
ATGGAATCTGATTCTTTACACGAACATGATAAAAGCTGGAAGGCATTTTTTATTACCACTCTGTTCATCTTGTGTACAGC
GAACGTTTATGCGCAGTCATCCGATACAATCTTTTCCCGATATTTCCGTTATGCGCAGAACTTCGCAGATGCGTACCCTC
GCGAGAAAGTGAGTCTTCATTTGGATAATGCAAGTTATTACCTTGGTGATACGATTTGGTTCAAAGCGTATGTAGTGACG
GCTGAACAAAACTTACCGACGACGATCAGCAAACCTTTGTATGTAGAATTACTGGACCAGTTGGGAAATGTCGTAGAGCG
GCAAATTATTCAGCTTACGGATGGGGAGGGAACGGGACAAATCATTTTGAACAATACCTTCTTTACCGGTTATTATGAAA
TGCGTGCCTATACAAAGTGGATGCTTGCTTTTGATAACCCTTCCTGTTTTTCCCGTGTATTACCCGTCTATCGGAAACGG
CTGAGCGATGAAGAGACTCCTCGGAGTATAGCTACCTATCGTATGGACGCTTCGATGAAACAGAGGCCGAAGGATAAAGA
GAAGAAGTTTACAGTCCGCTTTTTTCCGGAGGGTGGACAACTGGTTAAAGGCATATCTTCGATTGTAGCTTTTGAAGCCA
CCAGCCGTGACAAAGGAGCTGCTGATGTAGAGGGAACAGTGGTTTTGCCGAGTGGTGAAGAACTGGCGCATATCCGTTCA
TTGCATGACGGGATGGGTTACTTTGAGTATAAGCCCGAAGAAAAGGCGGGTGTGGCAAAAATTGATTATGAAGGCTCCAC
TTATCAGTTTGACCTTCCGGAAGCTCTTCCACAAGGATATGTACTCCGAATCGATAACCGGCGGGAAATGTTGGATATCA
CTGTAGCCCGCAGTTCACAGGCAATGAAAGACACACTGGCTGTTTTTGTATCTTCTCAGGGGCGACCTTACAAATGTATG
ACACTGGACTTTGAAGATGAATTGAACTGCCAATTCCGGATTTCGACTAAAGAACTACCGCCCGGAGTGCAACAGATATC
TCTGGTCAATCTGAAAGGGGAAACGTTATGCGAGCGTTTTTGTTATGTGATGCCGCGTTCTTCCATGCTCCTTGCCTGTA
AAACGGATCACGCCCTGTATCGTCCTTTTGAGCCGGTGACTTGCCGGATTAAAGTGAGAGATCATCTGAATCGTCCGGTA
CAGGCCAATCTTTCTGTATCTATCCGCAACGGTGTAGAGTCTGATTTTCGGGAATACGATCATTCCATTTATACGGATTT
GTTGCTTGTCTCCGATCTGAAAGGCTATATTCATCAACCCGGTTTTTATTTTGAGAACCAGTCTGCCGAACGTTTCAAAA
TGTTGGATGTCCTTCTGTTGGTACGTGGCTGGCGGAAGTATGACCTTTCCCGACTGATAGGTAAACGTCCTTTCTTGCCT
CGGTATCTTCCGGAGACCTCGCTGACCCTGTATGGACAGGTCGAATCTTATTTCGGTAAGGCGTTACGGAATGTCGGGGT
GAGTATTCTTGCGCGCAGGGATTCGGTCTCTATTGCAGGTATGACAAAAACGGATTCATTGGGGTATTTTAGTGCGCCGG
TAGATGGTTTTAGCGGTTCTATGGATGCTCTCATACAGACACGGAACGAGGGAAAGAAGTGGAACAAGCAGGCAGTCGTG
AAGTTGTTCCGTAATTTTGAGCCTTCCTTACGGAAGCTTGATTATTATGAGCTGAATCCGGAATGGAAAGAGGCGGGTGA
TTTGAAACAGTTGTTGGACACCTTGGATATTGCTTATAAAGATTCTGTATTCGGACCGGATCATCATTTGCTGGATGAAG
TGGTGGTGAACGCCAAGCGTCTGAACTTGTTATTGAAGCAAACTGAACGCTTTGAAAAAGAGATTCTGGGTTATTATAAT
ATAACGCAGGTGGTAGATAAAATGCGTGATAAAGGAGAAGCGGTGTACAATCTGCCTATGCTGTTGAAGGAATTAAATCC
TAATTTCAGATTGAGTGATTCGCTGAGCCTGCACTATAATAACTCAAGAGTTTTATTTATAGTCAACGGCGGGGTTTTAT
CTTATGGTAAAACGGATTATGTGTTGGACAAAGATGTGGATGCTATTAAATCTATCATGCTTTATTATGATCAGGCAGGG
GGGGAATCTGTTTTTGTGATGAACAAGCAGAGTAATAGAGTGACGAAATTTACAGCAAATAATTTTTGGAGTGGTCGCTG
GCAGGATGGAGATTTGAGTGATTTGTCTTTGCAGGATGCTATAGGTGCGGATTCCGGACCAGATGCACTTTGGGGTGAGA
AAGATAGAAAGACTATGAAGAAAGGTCCGTTGCAGAAATCGTCAGTAGTAGTTTGCTCCATCACTACGATTGATGACTGG
GACCCGAACAAAACTTATAAAGCCCGGCGCGGGATTCGTCATACCTATATACAAGGATATAATGAGCCCTTGGAATTTTA
TTCACCAGCTTATCCTGATGGTGCTCCTCTCTATACGGAAGATTCTCGCCGCACACTATACTGGAATCCGAATGTGAAAA
CGAATAAAAAGGGTGAAGTAGTCATTCAATGCTATAACTCCGATAATTCGGCACCGTTAATAATAAATGTAGAGACATTG
TATAAAGGTAGTCCGTCATCATTGAATATCTACTCTATAGATTATTAA

Upstream 100 bases:

>100_bases
CATGATTTTCTACCCTTTCTGCATGATTTTTACAGCGAATAAAATAAAACAACTGTAATTTTGCAATCAATCAAATAACC
GAATCTAATACTTGCAGAAA

Downstream 100 bases:

>100_bases
ACTCGATCTATATTATTCATATTCATATAAAGTCCTGTTAAAGAGGAAGAAAGGAGTTGTGTTTCTTGCAGCCAACGTGT
GTAAATCGTTTATGAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 895; Mature: 895

Protein sequence:

>895_residues
MESDSLHEHDKSWKAFFITTLFILCTANVYAQSSDTIFSRYFRYAQNFADAYPREKVSLHLDNASYYLGDTIWFKAYVVT
AEQNLPTTISKPLYVELLDQLGNVVERQIIQLTDGEGTGQIILNNTFFTGYYEMRAYTKWMLAFDNPSCFSRVLPVYRKR
LSDEETPRSIATYRMDASMKQRPKDKEKKFTVRFFPEGGQLVKGISSIVAFEATSRDKGAADVEGTVVLPSGEELAHIRS
LHDGMGYFEYKPEEKAGVAKIDYEGSTYQFDLPEALPQGYVLRIDNRREMLDITVARSSQAMKDTLAVFVSSQGRPYKCM
TLDFEDELNCQFRISTKELPPGVQQISLVNLKGETLCERFCYVMPRSSMLLACKTDHALYRPFEPVTCRIKVRDHLNRPV
QANLSVSIRNGVESDFREYDHSIYTDLLLVSDLKGYIHQPGFYFENQSAERFKMLDVLLLVRGWRKYDLSRLIGKRPFLP
RYLPETSLTLYGQVESYFGKALRNVGVSILARRDSVSIAGMTKTDSLGYFSAPVDGFSGSMDALIQTRNEGKKWNKQAVV
KLFRNFEPSLRKLDYYELNPEWKEAGDLKQLLDTLDIAYKDSVFGPDHHLLDEVVVNAKRLNLLLKQTERFEKEILGYYN
ITQVVDKMRDKGEAVYNLPMLLKELNPNFRLSDSLSLHYNNSRVLFIVNGGVLSYGKTDYVLDKDVDAIKSIMLYYDQAG
GESVFVMNKQSNRVTKFTANNFWSGRWQDGDLSDLSLQDAIGADSGPDALWGEKDRKTMKKGPLQKSSVVVCSITTIDDW
DPNKTYKARRGIRHTYIQGYNEPLEFYSPAYPDGAPLYTEDSRRTLYWNPNVKTNKKGEVVIQCYNSDNSAPLIINVETL
YKGSPSSLNIYSIDY

Sequences:

>Translated_895_residues
MESDSLHEHDKSWKAFFITTLFILCTANVYAQSSDTIFSRYFRYAQNFADAYPREKVSLHLDNASYYLGDTIWFKAYVVT
AEQNLPTTISKPLYVELLDQLGNVVERQIIQLTDGEGTGQIILNNTFFTGYYEMRAYTKWMLAFDNPSCFSRVLPVYRKR
LSDEETPRSIATYRMDASMKQRPKDKEKKFTVRFFPEGGQLVKGISSIVAFEATSRDKGAADVEGTVVLPSGEELAHIRS
LHDGMGYFEYKPEEKAGVAKIDYEGSTYQFDLPEALPQGYVLRIDNRREMLDITVARSSQAMKDTLAVFVSSQGRPYKCM
TLDFEDELNCQFRISTKELPPGVQQISLVNLKGETLCERFCYVMPRSSMLLACKTDHALYRPFEPVTCRIKVRDHLNRPV
QANLSVSIRNGVESDFREYDHSIYTDLLLVSDLKGYIHQPGFYFENQSAERFKMLDVLLLVRGWRKYDLSRLIGKRPFLP
RYLPETSLTLYGQVESYFGKALRNVGVSILARRDSVSIAGMTKTDSLGYFSAPVDGFSGSMDALIQTRNEGKKWNKQAVV
KLFRNFEPSLRKLDYYELNPEWKEAGDLKQLLDTLDIAYKDSVFGPDHHLLDEVVVNAKRLNLLLKQTERFEKEILGYYN
ITQVVDKMRDKGEAVYNLPMLLKELNPNFRLSDSLSLHYNNSRVLFIVNGGVLSYGKTDYVLDKDVDAIKSIMLYYDQAG
GESVFVMNKQSNRVTKFTANNFWSGRWQDGDLSDLSLQDAIGADSGPDALWGEKDRKTMKKGPLQKSSVVVCSITTIDDW
DPNKTYKARRGIRHTYIQGYNEPLEFYSPAYPDGAPLYTEDSRRTLYWNPNVKTNKKGEVVIQCYNSDNSAPLIINVETL
YKGSPSSLNIYSIDY
>Mature_895_residues
MESDSLHEHDKSWKAFFITTLFILCTANVYAQSSDTIFSRYFRYAQNFADAYPREKVSLHLDNASYYLGDTIWFKAYVVT
AEQNLPTTISKPLYVELLDQLGNVVERQIIQLTDGEGTGQIILNNTFFTGYYEMRAYTKWMLAFDNPSCFSRVLPVYRKR
LSDEETPRSIATYRMDASMKQRPKDKEKKFTVRFFPEGGQLVKGISSIVAFEATSRDKGAADVEGTVVLPSGEELAHIRS
LHDGMGYFEYKPEEKAGVAKIDYEGSTYQFDLPEALPQGYVLRIDNRREMLDITVARSSQAMKDTLAVFVSSQGRPYKCM
TLDFEDELNCQFRISTKELPPGVQQISLVNLKGETLCERFCYVMPRSSMLLACKTDHALYRPFEPVTCRIKVRDHLNRPV
QANLSVSIRNGVESDFREYDHSIYTDLLLVSDLKGYIHQPGFYFENQSAERFKMLDVLLLVRGWRKYDLSRLIGKRPFLP
RYLPETSLTLYGQVESYFGKALRNVGVSILARRDSVSIAGMTKTDSLGYFSAPVDGFSGSMDALIQTRNEGKKWNKQAVV
KLFRNFEPSLRKLDYYELNPEWKEAGDLKQLLDTLDIAYKDSVFGPDHHLLDEVVVNAKRLNLLLKQTERFEKEILGYYN
ITQVVDKMRDKGEAVYNLPMLLKELNPNFRLSDSLSLHYNNSRVLFIVNGGVLSYGKTDYVLDKDVDAIKSIMLYYDQAG
GESVFVMNKQSNRVTKFTANNFWSGRWQDGDLSDLSLQDAIGADSGPDALWGEKDRKTMKKGPLQKSSVVVCSITTIDDW
DPNKTYKARRGIRHTYIQGYNEPLEFYSPAYPDGAPLYTEDSRRTLYWNPNVKTNKKGEVVIQCYNSDNSAPLIINVETL
YKGSPSSLNIYSIDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102425; Mature: 102425

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESDSLHEHDKSWKAFFITTLFILCTANVYAQSSDTIFSRYFRYAQNFADAYPREKVSLH
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
LDNASYYLGDTIWFKAYVVTAEQNLPTTISKPLYVELLDQLGNVVERQIIQLTDGEGTGQ
ECCCCEEECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCE
IILNNTFFTGYYEMRAYTKWMLAFDNPSCFSRVLPVYRKRLSDEETPRSIATYRMDASMK
EEEECEEEEEEEHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCHHH
QRPKDKEKKFTVRFFPEGGQLVKGISSIVAFEATSRDKGAADVEGTVVLPSGEELAHIRS
HCCCCCCCEEEEEEECCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCHHHHHHHH
LHDGMGYFEYKPEEKAGVAKIDYEGSTYQFDLPEALPQGYVLRIDNRREMLDITVARSSQ
HHHCCCCEEECCCCCCCEEEEECCCCEEEEECHHHCCCCEEEEECCCCEEEEEEEECCCH
AMKDTLAVFVSSQGRPYKCMTLDFEDELNCQFRISTKELPPGVQQISLVNLKGETLCERF
HHHHHHHHEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHH
CYVMPRSSMLLACKTDHALYRPFEPVTCRIKVRDHLNRPVQANLSVSIRNGVESDFREYD
HHHCCCCCEEEEEECCCHHCCCCCCEEEEEEEHHHCCCCEEECEEEEECCCCHHHHHHHH
HSIYTDLLLVSDLKGYIHQPGFYFENQSAERFKMLDVLLLVRGWRKYDLSRLIGKRPFLP
HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
RYLPETSLTLYGQVESYFGKALRNVGVSILARRDSVSIAGMTKTDSLGYFSAPVDGFSGS
CCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCEEECCCCCCCCC
MDALIQTRNEGKKWNKQAVVKLFRNFEPSLRKLDYYELNPEWKEAGDLKQLLDTLDIAYK
HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCEEECCCCHHHCCHHHHHHHHHHHHHC
DSVFGPDHHLLDEVVVNAKRLNLLLKQTERFEKEILGYYNITQVVDKMRDKGEAVYNLPM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHH
LLKELNPNFRLSDSLSLHYNNSRVLFIVNGGVLSYGKTDYVLDKDVDAIKSIMLYYDQAG
HHHHCCCCEEECCCEEEEECCCEEEEEEECCEEECCCCCEEECCCHHHHHHHHHHHCCCC
GESVFVMNKQSNRVTKFTANNFWSGRWQDGDLSDLSLQDAIGADSGPDALWGEKDRKTMK
CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH
KGPLQKSSVVVCSITTIDDWDPNKTYKARRGIRHTYIQGYNEPLEFYSPAYPDGAPLYTE
HCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHHHCCCCCCHHHCCCCCCCCCCEEEC
DSRRTLYWNPNVKTNKKGEVVIQCYNSDNSAPLIINVETLYKGSPSSLNIYSIDY
CCCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEHHEECCCCCCEEEEEECC
>Mature Secondary Structure
MESDSLHEHDKSWKAFFITTLFILCTANVYAQSSDTIFSRYFRYAQNFADAYPREKVSLH
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
LDNASYYLGDTIWFKAYVVTAEQNLPTTISKPLYVELLDQLGNVVERQIIQLTDGEGTGQ
ECCCCEEECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCE
IILNNTFFTGYYEMRAYTKWMLAFDNPSCFSRVLPVYRKRLSDEETPRSIATYRMDASMK
EEEECEEEEEEEHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCHHH
QRPKDKEKKFTVRFFPEGGQLVKGISSIVAFEATSRDKGAADVEGTVVLPSGEELAHIRS
HCCCCCCCEEEEEEECCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCHHHHHHHH
LHDGMGYFEYKPEEKAGVAKIDYEGSTYQFDLPEALPQGYVLRIDNRREMLDITVARSSQ
HHHCCCCEEECCCCCCCEEEEECCCCEEEEECHHHCCCCEEEEECCCCEEEEEEEECCCH
AMKDTLAVFVSSQGRPYKCMTLDFEDELNCQFRISTKELPPGVQQISLVNLKGETLCERF
HHHHHHHHEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHH
CYVMPRSSMLLACKTDHALYRPFEPVTCRIKVRDHLNRPVQANLSVSIRNGVESDFREYD
HHHCCCCCEEEEEECCCHHCCCCCCEEEEEEEHHHCCCCEEECEEEEECCCCHHHHHHHH
HSIYTDLLLVSDLKGYIHQPGFYFENQSAERFKMLDVLLLVRGWRKYDLSRLIGKRPFLP
HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
RYLPETSLTLYGQVESYFGKALRNVGVSILARRDSVSIAGMTKTDSLGYFSAPVDGFSGS
CCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCEEECCCCCCCCC
MDALIQTRNEGKKWNKQAVVKLFRNFEPSLRKLDYYELNPEWKEAGDLKQLLDTLDIAYK
HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCEEECCCCHHHCCHHHHHHHHHHHHHC
DSVFGPDHHLLDEVVVNAKRLNLLLKQTERFEKEILGYYNITQVVDKMRDKGEAVYNLPM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHH
LLKELNPNFRLSDSLSLHYNNSRVLFIVNGGVLSYGKTDYVLDKDVDAIKSIMLYYDQAG
HHHHCCCCEEECCCEEEEECCCEEEEEEECCEEECCCCCEEECCCHHHHHHHHHHHCCCC
GESVFVMNKQSNRVTKFTANNFWSGRWQDGDLSDLSLQDAIGADSGPDALWGEKDRKTMK
CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH
KGPLQKSSVVVCSITTIDDWDPNKTYKARRGIRHTYIQGYNEPLEFYSPAYPDGAPLYTE
HCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHHHCCCCCCHHHCCCCCCCCCCEEEC
DSRRTLYWNPNVKTNKKGEVVIQCYNSDNSAPLIINVETLYKGSPSSLNIYSIDY
CCCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEHHEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA