| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348454
Identifier: 29348454
GI number: 29348454
Start: 3854807
End: 3856789
Strand: Reverse
Name: 29348454
Synonym: BT_3045
Alternate gene names: NA
Gene position: 3856789-3854807 (Counterclockwise)
Preceding gene: 29348455
Following gene: 29348453
Centisome position: 61.61
GC content: 43.62
Gene sequence:
>1983_bases ATGAATTTCAGAAAAATATATTGCATAGCCGCTATGGCACTGATGTGTTGCACAGGAAGTATGTTTACCTCCTGTGACGA CTACCTGGATGTAGACTCATACTTCGATGAGATTTTTGAGCTAGACTCTGTATTTAAACGTAAGGAATATCTGGAAGAAT ATATCAATGGTGCCGGAAAGTTATTACCTAATGAAGGAGACTTGTGGACCAATGCTTGGTCGCCTTATCAGGGAGCTTCG GACGAGAACTTTACATCATGGAATGACTCCCGTCATAAAGCTATCCAGCTGATGGTGGACGAAGTGACTCCACAGAGTGA TTTCTATAATAACTATGGTACTTGGTATAAAGGTATTCGTAAAGCCAACCTCGTCTTGGAAAGAATCAATGAATGTGAGG ATATTACTACGAGCGATTTGCGTGACTTTATGGGACGTTGTTATTTCTTGAGAGCTTATTTCTATTATAAACTGGTAGAG GCTTACGGACCTGTGCCCATTGTGCCTGAGATGGCTTATGATGTGGATGCCAGTGCGGAAAGCATGTCATTGGAAAGAGA GACATACGAGAATTGTATTAACTATATCTGCGAGAATTTCGAGAAAGCATACGAATATCTTCCTTCCAGCCGTACGTCTA CCCTAGTCAATCTGCCTACTTCGGGAGCGGCATTGGCATTGATGGGAAGAGTAAGACTGATCGAAGCAAGTCCTTGGTAC AACGGAAATGAGTTTTATGCTGATTGGAAGCGTTCGGACGGTACCAACTTTATGCCTCAAGTCAAAGACGAATCCAAATG GGGAACAGCCGCTCTTCTTGCCAAACGTTTGATTAAGGGTTCGGAAGCTGGTAGCTTTAAATATAAGCTGCACACTGTTG AGAGAAAACTAGACACAAAACCGCTACCGGAGAATGTGCCTGACGAAAACTATCCTAATGGAGCGGGAGGTATAGATGCG CTTCGTTCTTATGCTTTTATGTTCAATGGTGAAACTCCGGCTTATAATAATGACGAGTTTATTTATATGTGCGGCTACTC TAGTACAGCTGGCGACTCTCCGGCATGGATTGCTACTCCTACGAGCCTGGGTGGTGGTAATGGGTTGAATATTACTTATG CGACTGTGAAAGCTTTCCGTATGGAAGACGGTAGCGACATCAATAACTCACCACTTTATCCCACAAATTACTGGGAAGCC ATTGGTGGTAGTTCACAGTCTTTCTCTGACTATACACTTCCGTCCGATGCTGCTAAGATGTTTGATAAGATGGAAATGCG TTTCTATGCCAGCGTAGGTTTTAACCATTGCTACTGGAGCGGACTTTCTTACATCGGAACCGAAGGTAATCAGACTAAGC AGACAGTTACTTACTATGCTAATGGTACTGCTGCACCGTCGTCCGATCATCCTGAAGATTATAACCACACTGGTTTTACC TGCAAGAAGTACATTCATTATGTAGAGGATCAGCTGAAAGGTATGATGAAGTCGAAAACTTTCCCGATCATGCGTTATGC AGAGGTGCTGCTCAACTATGTGGAAGCATTGAATGAGTTGGGAAGTAATACATATACCGACGAAGAGAATGGGATTACAG TGAGCCGTGATGTAGACGAGATGGTGAAATACTTTAATATGGTTCGCTATAGAGCCGGTTTGCCGGGCATTACAGCGGAT GATGCAAGGGATGTGACTACGATGCGGGATTTGATTAAGCGTGAAAGACGGGTGGAGTTTTTCTGTGAAGGCAGACGTTA TCACGATTTGCGTAGATGGGGAGATGCAATCGATGCATACAATGAGCCTGTAACAGGTATGAACATTGCTGCACGTAGCA CAGACCGTAAAGCATTCCATACGGAAACAGTGATCAATAATACTCGTTCGCATCGTGTATTCTCTTATAAAGATTACTTC CTGCCTATCCCTCGTACAACGATGGATAAGAACCCGAAACTGGTTCAGAATCCGGGATGGTAA
Upstream 100 bases:
>100_bases AAACGGTGCCGTGTATCCTCTGCAACGGAAATTCACCCTTCAGCTTAATGTGACGTTTTAATCCCGTTTCAATTGTAACA TTATCATAAATCGTATAATT
Downstream 100 bases:
>100_bases TTTTGCACACGAAGTACAGAATTAATAATTAAGTAAAAAACGTTTGTTATGAATATCAATAAAATACTATATCCGATACT TTTGTTATTGGTCGTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MNFRKIYCIAAMALMCCTGSMFTSCDDYLDVDSYFDEIFELDSVFKRKEYLEEYINGAGKLLPNEGDLWTNAWSPYQGAS DENFTSWNDSRHKAIQLMVDEVTPQSDFYNNYGTWYKGIRKANLVLERINECEDITTSDLRDFMGRCYFLRAYFYYKLVE AYGPVPIVPEMAYDVDASAESMSLERETYENCINYICENFEKAYEYLPSSRTSTLVNLPTSGAALALMGRVRLIEASPWY NGNEFYADWKRSDGTNFMPQVKDESKWGTAALLAKRLIKGSEAGSFKYKLHTVERKLDTKPLPENVPDENYPNGAGGIDA LRSYAFMFNGETPAYNNDEFIYMCGYSSTAGDSPAWIATPTSLGGGNGLNITYATVKAFRMEDGSDINNSPLYPTNYWEA IGGSSQSFSDYTLPSDAAKMFDKMEMRFYASVGFNHCYWSGLSYIGTEGNQTKQTVTYYANGTAAPSSDHPEDYNHTGFT CKKYIHYVEDQLKGMMKSKTFPIMRYAEVLLNYVEALNELGSNTYTDEENGITVSRDVDEMVKYFNMVRYRAGLPGITAD DARDVTTMRDLIKRERRVEFFCEGRRYHDLRRWGDAIDAYNEPVTGMNIAARSTDRKAFHTETVINNTRSHRVFSYKDYF LPIPRTTMDKNPKLVQNPGW
Sequences:
>Translated_660_residues MNFRKIYCIAAMALMCCTGSMFTSCDDYLDVDSYFDEIFELDSVFKRKEYLEEYINGAGKLLPNEGDLWTNAWSPYQGAS DENFTSWNDSRHKAIQLMVDEVTPQSDFYNNYGTWYKGIRKANLVLERINECEDITTSDLRDFMGRCYFLRAYFYYKLVE AYGPVPIVPEMAYDVDASAESMSLERETYENCINYICENFEKAYEYLPSSRTSTLVNLPTSGAALALMGRVRLIEASPWY NGNEFYADWKRSDGTNFMPQVKDESKWGTAALLAKRLIKGSEAGSFKYKLHTVERKLDTKPLPENVPDENYPNGAGGIDA LRSYAFMFNGETPAYNNDEFIYMCGYSSTAGDSPAWIATPTSLGGGNGLNITYATVKAFRMEDGSDINNSPLYPTNYWEA IGGSSQSFSDYTLPSDAAKMFDKMEMRFYASVGFNHCYWSGLSYIGTEGNQTKQTVTYYANGTAAPSSDHPEDYNHTGFT CKKYIHYVEDQLKGMMKSKTFPIMRYAEVLLNYVEALNELGSNTYTDEENGITVSRDVDEMVKYFNMVRYRAGLPGITAD DARDVTTMRDLIKRERRVEFFCEGRRYHDLRRWGDAIDAYNEPVTGMNIAARSTDRKAFHTETVINNTRSHRVFSYKDYF LPIPRTTMDKNPKLVQNPGW >Mature_660_residues MNFRKIYCIAAMALMCCTGSMFTSCDDYLDVDSYFDEIFELDSVFKRKEYLEEYINGAGKLLPNEGDLWTNAWSPYQGAS DENFTSWNDSRHKAIQLMVDEVTPQSDFYNNYGTWYKGIRKANLVLERINECEDITTSDLRDFMGRCYFLRAYFYYKLVE AYGPVPIVPEMAYDVDASAESMSLERETYENCINYICENFEKAYEYLPSSRTSTLVNLPTSGAALALMGRVRLIEASPWY NGNEFYADWKRSDGTNFMPQVKDESKWGTAALLAKRLIKGSEAGSFKYKLHTVERKLDTKPLPENVPDENYPNGAGGIDA LRSYAFMFNGETPAYNNDEFIYMCGYSSTAGDSPAWIATPTSLGGGNGLNITYATVKAFRMEDGSDINNSPLYPTNYWEA IGGSSQSFSDYTLPSDAAKMFDKMEMRFYASVGFNHCYWSGLSYIGTEGNQTKQTVTYYANGTAAPSSDHPEDYNHTGFT CKKYIHYVEDQLKGMMKSKTFPIMRYAEVLLNYVEALNELGSNTYTDEENGITVSRDVDEMVKYFNMVRYRAGLPGITAD DARDVTTMRDLIKRERRVEFFCEGRRYHDLRRWGDAIDAYNEPVTGMNIAARSTDRKAFHTETVINNTRSHRVFSYKDYF LPIPRTTMDKNPKLVQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75438; Mature: 75438
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRKIYCIAAMALMCCTGSMFTSCDDYLDVDSYFDEIFELDSVFKRKEYLEEYINGAGK CCCHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LLPNEGDLWTNAWSPYQGASDENFTSWNDSRHKAIQLMVDEVTPQSDFYNNYGTWYKGIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH KANLVLERINECEDITTSDLRDFMGRCYFLRAYFYYKLVEAYGPVPIVPEMAYDVDASAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHH SMSLERETYENCINYICENFEKAYEYLPSSRTSTLVNLPTSGAALALMGRVRLIEASPWY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCEEEEECCCCC NGNEFYADWKRSDGTNFMPQVKDESKWGTAALLAKRLIKGSEAGSFKYKLHTVERKLDTK CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCC PLPENVPDENYPNGAGGIDALRSYAFMFNGETPAYNNDEFIYMCGYSSTAGDSPAWIATP CCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEECC TSLGGGNGLNITYATVKAFRMEDGSDINNSPLYPTNYWEAIGGSSQSFSDYTLPSDAAKM CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHH FDKMEMRFYASVGFNHCYWSGLSYIGTEGNQTKQTVTYYANGTAAPSSDHPEDYNHTGFT HHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHH CKKYIHYVEDQLKGMMKSKTFPIMRYAEVLLNYVEALNELGSNTYTDEENGITVSRDVDE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHH MVKYFNMVRYRAGLPGITADDARDVTTMRDLIKRERRVEFFCEGRRYHDLRRWGDAIDAY HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NEPVTGMNIAARSTDRKAFHTETVINNTRSHRVFSYKDYFLPIPRTTMDKNPKLVQNPGW CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFRKIYCIAAMALMCCTGSMFTSCDDYLDVDSYFDEIFELDSVFKRKEYLEEYINGAGK CCCHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LLPNEGDLWTNAWSPYQGASDENFTSWNDSRHKAIQLMVDEVTPQSDFYNNYGTWYKGIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH KANLVLERINECEDITTSDLRDFMGRCYFLRAYFYYKLVEAYGPVPIVPEMAYDVDASAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHH SMSLERETYENCINYICENFEKAYEYLPSSRTSTLVNLPTSGAALALMGRVRLIEASPWY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCEEEEECCCCC NGNEFYADWKRSDGTNFMPQVKDESKWGTAALLAKRLIKGSEAGSFKYKLHTVERKLDTK CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCC PLPENVPDENYPNGAGGIDALRSYAFMFNGETPAYNNDEFIYMCGYSSTAGDSPAWIATP CCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEECC TSLGGGNGLNITYATVKAFRMEDGSDINNSPLYPTNYWEAIGGSSQSFSDYTLPSDAAKM CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHH FDKMEMRFYASVGFNHCYWSGLSYIGTEGNQTKQTVTYYANGTAAPSSDHPEDYNHTGFT HHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHH CKKYIHYVEDQLKGMMKSKTFPIMRYAEVLLNYVEALNELGSNTYTDEENGITVSRDVDE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHH MVKYFNMVRYRAGLPGITADDARDVTTMRDLIKRERRVEFFCEGRRYHDLRRWGDAIDAY HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NEPVTGMNIAARSTDRKAFHTETVINNTRSHRVFSYKDYFLPIPRTTMDKNPKLVQNPGW CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA