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The map label for this gene is 29348379

Identifier: 29348379

GI number: 29348379

Start: 3746063

End: 3747517

Strand: Reverse

Name: 29348379

Synonym: BT_2970

Alternate gene names: NA

Gene position: 3747517-3746063 (Counterclockwise)

Preceding gene: 29348380

Following gene: 29348378

Centisome position: 59.86

GC content: 42.75

Gene sequence:

>1455_bases
ATGAAAAACACAATAATTTATCGCATGAAAAGCAGATTAATAACATTACTCTTATTATTGATTACTGTCAGTTCTGTAAC
GTTTGCTCAAGAAGCAAAGAAGGAAATTCCTTTGAAATATGGAGCTACGAATGAAGGTAAACGGCAAGACCCTGCCATGC
AGAAGTTCCGTGACAATCGTTTGGGTGCCTTCATCCACTGGGGACTGTATGCTATCCCCGGGGGAGAGTGGAATGGAAAA
GTATATGGCGGAGCTGCCGAATGGCTGAAAAGCTGGGCAAAAGTACCTGCTGATGAATGGCTGAAACTGATGGATCAATG
GAACCCTACGAAATTTGATGCGAAGAAATGGGCAAAGATGGCCAAAGAAATGGGTACTAAGTATGTCAAGATTACAACGA
AACATCATGAAGGCTTCTGTCTGTGGCCTAGTAAGTATACTAAATATACCGTAGCAAATACCCCATATAAGCGTGATATA
TTGGGCGAGTTGGTGAAAGCCTATAATGACGAAGGAATTGATGTACACTTCTATTTCTCAGTGATGGACTGGAGTAATCC
GGATTATCGTTATGATATAAAATCCAAAGAAGATAGCATCGCCTTCAGCCGTTTCCTTGAATTTACCGACAATCAACTGA
AAGAACTGGCAACACGTTACCCGACCGTTAAGGACTTCTGGTTTGATGGTACGTGGGATGCCAGCGTTAAAAAGAATGGT
TGGTGGACAGCTCATGCAGAACAAATGTTGAAGGAACTCGTTCCGGGTGTTGCCATCAATAGCCGCTTACGTGCTGATGA
CAAAGGAAAGCGACATTTTGATAGCAATGGTCGTCTGATGGGTGACTACGAATCCGGCTACGAACGCCGCTTGCCCGATC
CGGTGAAAGATCTCAAAGTTACACAGTGGGACTGGGAAGCCTGCATGACTATACCCGAAAATCAATGGGGATATCACAAA
GACTGGTCATTGAGCTATGTGAAAACTCCGATTGAAGTCATTGACCGCATTGTACACGCTGTTTCCATGGGTGGAAACAT
GGTTGTCAACTTCGGGCCTCAGGCAGATGGTGATTTCCGTCCCGAAGAGAAAGCAATGGCTACAGCGATTGGTAAGTGGA
TGAATCGTTACGGAAAAGCTGTTTATGCTTGCGATTATGCCGGATTTGAAAAACAAGACTGGGGATATTATACACGTGGT
AAAAACGATGAAGTTTATATGGTAGTATTCAATCAGCCTTATAGTGAACGGTTGATTGTAAAGACTCCGAAAGGCATTAC
AGTAGAAAAAGCCACTTTGCTGACTACCGGTGAAGATATCACTGTTGTTGAGACAACCCGCAATGAATATAACGTATCTG
TTCCTAAAAAGAATCCGGGTGAACCTTATGTAATTCAGCTTAAAGTTCGTGCAGCTAAAGGAACAAAAAGTATTTATCGA
GATGCTTTAACATAA

Upstream 100 bases:

>100_bases
TTTTTGCAAAATTTGTGTTTATGGATGTCATATAGGTCTCCTATTTTTGCAATGCTTTCATTCTGTTTTAATACATAGAA
TCAAAGACAATAAAATAAGT

Downstream 100 bases:

>100_bases
ATGATAAAGAAACGATTCTATGAAGTTTAAATATATACTCATTTTATCAGCGCTTATCGGGCAGATTCTTTCACTCTCTG
CCCGGGAAGTGACCTCTTTC

Product: alpha-L-fucosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase; Coagulation Factor 5/8 Type Domain Protein; Alpha-L-Fucosidase Protein; Calx-Beta Domain-Containing Protein; Exported Alpha-L-Fucosidase Protein; Alpha-1 3/4-Fucosidase; Lipoprotein; Exporte Hydrolase; Exported Fucosidase; Alpha-L-Fucosidase Family Protein; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-L-Fucosidase-Like Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase; Glycosyl Hydrolase Alpha-L-Fucosidase; Exported Hydrolase; Twin-Arginine Translocation Pathway Signal; Ig Domain-Containing; Alpha-L-Fucosidase Superfamily; Fucosidase; DS Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Glycoside Hydrolase

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKNTIIYRMKSRLITLLLLLITVSSVTFAQEAKKEIPLKYGATNEGKRQDPAMQKFRDNRLGAFIHWGLYAIPGGEWNGK
VYGGAAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDI
LGELVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNG
WWTAHAEQMLKELVPGVAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKVTQWDWEACMTIPENQWGYHK
DWSLSYVKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFRPEEKAMATAIGKWMNRYGKAVYACDYAGFEKQDWGYYTRG
KNDEVYMVVFNQPYSERLIVKTPKGITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAKGTKSIYR
DALT

Sequences:

>Translated_484_residues
MKNTIIYRMKSRLITLLLLLITVSSVTFAQEAKKEIPLKYGATNEGKRQDPAMQKFRDNRLGAFIHWGLYAIPGGEWNGK
VYGGAAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDI
LGELVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNG
WWTAHAEQMLKELVPGVAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKVTQWDWEACMTIPENQWGYHK
DWSLSYVKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFRPEEKAMATAIGKWMNRYGKAVYACDYAGFEKQDWGYYTRG
KNDEVYMVVFNQPYSERLIVKTPKGITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAKGTKSIYR
DALT
>Mature_484_residues
MKNTIIYRMKSRLITLLLLLITVSSVTFAQEAKKEIPLKYGATNEGKRQDPAMQKFRDNRLGAFIHWGLYAIPGGEWNGK
VYGGAAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDI
LGELVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNG
WWTAHAEQMLKELVPGVAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKVTQWDWEACMTIPENQWGYHK
DWSLSYVKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFRPEEKAMATAIGKWMNRYGKAVYACDYAGFEKQDWGYYTRG
KNDEVYMVVFNQPYSERLIVKTPKGITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAKGTKSIYR
DALT

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119360348, Length=439, Percent_Identity=26.4236902050114, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI40068512, Length=436, Percent_Identity=27.7522935779816, Blast_Score=129, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI71997700, Length=378, Percent_Identity=27.2486772486773, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24662717, Length=478, Percent_Identity=27.1966527196653, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI78706642, Length=478, Percent_Identity=27.1966527196653, Blast_Score=131, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55914; Mature: 55914

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTIIYRMKSRLITLLLLLITVSSVTFAQEAKKEIPLKYGATNEGKRQDPAMQKFRDNR
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHCCC
LGAFIHWGLYAIPGGEWNGKVYGGAAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKM
CCEEEEECEEEECCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHH
AKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFS
HHHHCCEEEEEEEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEE
VMDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNG
EEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCC
WWTAHAEQMLKELVPGVAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKV
CEEHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECCHHCCHHHCCCCCHHHCEE
TQWDWEACMTIPENQWGYHKDWSLSYVKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFR
EEECHHHHEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PEEKAMATAIGKWMNRYGKAVYACDYAGFEKQDWGYYTRGKNDEVYMVVFNQPYSERLIV
CHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEECCCCCEEEEEEECCCCCCEEEE
KTPKGITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAKGTKSIYR
ECCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCHHHHHH
DALT
HHCC
>Mature Secondary Structure
MKNTIIYRMKSRLITLLLLLITVSSVTFAQEAKKEIPLKYGATNEGKRQDPAMQKFRDNR
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHCCC
LGAFIHWGLYAIPGGEWNGKVYGGAAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKM
CCEEEEECEEEECCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHH
AKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFS
HHHHCCEEEEEEEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEE
VMDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNG
EEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCC
WWTAHAEQMLKELVPGVAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKV
CEEHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECCHHCCHHHCCCCCHHHCEE
TQWDWEACMTIPENQWGYHKDWSLSYVKTPIEVIDRIVHAVSMGGNMVVNFGPQADGDFR
EEECHHHHEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PEEKAMATAIGKWMNRYGKAVYACDYAGFEKQDWGYYTRGKNDEVYMVVFNQPYSERLIV
CHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEECCCCCEEEEEEECCCCCCEEEE
KTPKGITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAKGTKSIYR
ECCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCHHHHHH
DALT
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA