Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348367

Identifier: 29348367

GI number: 29348367

Start: 3725843

End: 3728212

Strand: Reverse

Name: 29348367

Synonym: BT_2958

Alternate gene names: NA

Gene position: 3728212-3725843 (Counterclockwise)

Preceding gene: 29348368

Following gene: 29348365

Centisome position: 59.55

GC content: 48.78

Gene sequence:

>2370_bases
ATGAGAAATAGAATTTTATTTTCTTTCCTTGCTTGGGTAGCAGTGATCGTGTCCGTTCAGGGTAAACAAAAAGATTTTGT
TTTGCAGTCCGGTCAGCCGGTTGCGATAGCTTGCAGCGGTTCGGAAGCACCGGTGGTGCGTACTTCGCTGGACTTGTTGT
CCCGTGACCTTCAGACTGTATTGTCGGCAACTGCCCATATAGACACAAACACCGGAAACATCATAGTAGGAACGATCGGA
CAGAGCAAGCTGATTGAGCAGGCAGGCATCGATATTTCCGCATTAAAAAACAAAAAGCAGGCTTTCATGCTCGCCGTCTC
AGAAGATGGAAAGCTAGTAGTAGCCGGCAGCGACAGTCACGGTACAGCCTACGGCATACTTGAAATATCCCGTCTGCTGG
GCGTTTCCCCTTGGGAATGGTGGGCAGATGTGACTCCGGAGAAGAAAGAGACATTTCGTCTTTCGGGCAAGTTTAGAGAG
TTGCAGTCTCCTTCTGTGGAGTATCGGGGCATCTTTATTAATGATGAAGATTGGGGACTGATGCCTTGGAGTAACAAGAC
CTACGAACCGTCGGATGTGAAAGGAGAAATCGGGCCGCGTACCAACGAACGTATTTTTGAGTTGCTGCTTCGTTTGCGGG
CCAATACCTACTGGCCTGCCATGCACGAGTGTACCCTTCCTTTCTTTCTGACGAAGGGCAATCGGGAAGCAGCGAAAAAG
TATGGCATCTTTATGGGAGCTTCCCACTGCGAACCGATGGCGTGCAATGCTGCCGGAGAATGGAAAATACGTGGAAAAGG
AGCATACGATTACGTGAATAACAGTCCGGCCGTTTATCAGTTTTGGGAAGATCGTGTGAAAGAAGTTGCCGGACAAGAGA
TACTTTACACGCTGGGTATGCGTGGCGTTCACGATGGAAAGATGCAGGGAGCCAAGACGGTAGAAGAGCAGAAAGCCGTC
CTGGACCGGGTATTTGTTGACCAGCGCGGCTTGCTCGAAAAGTACGTGAATAAAGACGTAACACAAGTGCCGCAGGTCTT
TATTCCTTATAAGGAAGTGCTCGATATTTATCATGCGGGGCTGCAAGTACCCGAAGACGTGACCTTGATGTGGTGTGATG
ATAACTACGGCTATATCCGCCATTTCCCCACTGCCGAAGAGCGTGCCCGTAAAGGCGGCAACGGAGTCTATTATCATGTT
TCCTACTGGGGACGCCCGCACGATCATTTATGGTTGAGCACCATGAGTCCATCACTCATTTATCAACAGATGAAGCAGGC
TTACGATCAGGGAATACAGAAAATGTGGATACTGAACGTCGGCGACATCAAGCCTGCCGAGTATCAGATAGAACTGTTCA
TGGATATGGCATGGAATCTGGATAAGGTATCTTCCGAAGGAGTGACCGCACATCTGAAACATTGGCTGGAACGGGAACTG
GGAACCTCTTGTGCAAAGACCATCCTCTCCGTTATGCAGGAACATTATCGCTTGGCACATATCCGCAAACCCGAATTTAT
GGGAAATACACGGGAGGAAGAAAAGAATCCGGTCTATCGGGTAGTCAAAGACTTACCGTGGAGCGAAAGAGAGATAAACG
AACGTCTGAATGCTTACAGCGAACTTTCGGAAACAGTAGAGAAAGCTGCTTCTAAAGTACCTGCCGGTAGGCAGAGTGCT
TACTTCGAACTGGTGAAATATCCCGTACAGGCTGCGACACAAATGAATCGCAAACTGTTATACGCCCAATTGGCACGCCA
CGATAAGGAAGACTGGGAAAAGAGTGATGCCGCTTACGACAGCATTGCTGCACTGACTCAACACTATAACTCATTGGAGA
ATGGAAAATGGAATCGCATGATGGACTTCAAACCCCGCAAGCTCCCTGTATTCAACCGTGTGGAAAGAAAGGCGGCTACT
GCTCCGATGACAGCGGACCGTAAAGCAGTCTGTCAATGGAACGCGGCGGAGGCAAAGAAGGGAAACGCTATTGTCTGCGA
AGGTTTGGGATATGAAAGCAAAGCCGCAGAGATAAAAAAAGGCGATGCGCTGACTTTCTCCTTTGGCAATCTGAAAACGG
ACTCGGTAGAGGTGGATATCCGGTTACTTCCCAACCATCCGGTGCATGGCGATAAGTTGCGTTTCACGGTTTCTCTGGAT
GGTGCCGAGCCTGAAGTGATAGCTTACGAAACGAAGGGACGCAGCGAGGAATGGAAAGAGAACGTGCTTCGTAATCAGGC
AATCCGGAAAATCGTACTTCCCGTTACGGGTAAGAAATCACATCAACTGGTCATCAAGGCATTGGATGAGGGAGTGATAC
TGGATCAGGTAATGCTTTATGAGGTGAATCGTAACAGTTCAGGTATTTGA

Upstream 100 bases:

>100_bases
TTACGGGCATCAGCCCCACATGGACTGATAAAACGAAGAGAATCTATGGCAGCGACGATTGCTTTGTGACCATTACTGAT
ATTGTAAAACTGTAATATTT

Downstream 100 bases:

>100_bases
AGTTTCTGTCATTCGGAAAGATATCTAAGGGAACGCAGTGAAGGATCTCTTCTCTCTTGTACAGTAAGAGGAGATTCTTC
CTCTCTTTGCTTACCCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG
QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE
LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV
LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV
SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA
YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT
APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI

Sequences:

>Translated_789_residues
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG
QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE
LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV
LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV
SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA
YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT
APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI
>Mature_789_residues
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG
QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE
LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV
LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV
SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA
YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT
APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89478; Mature: 89478

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTV
CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSH
HHHHHEEECCCCCEEEECCCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCCC
GTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSPSVEYRGIFINDEDWGL
CCEEHHHHHHHHHCCCCHHHHCCCCCCHHHHEEECCHHHHHCCCCCEEEEEEECCCCCCC
MPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCHHHHHH
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGM
HCEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCC
RGVHDGKMQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHC
LQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTMSPSLI
CCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHH
YQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEHHCCHHHHCCCCHHHHHHHHHHHHH
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYS
CHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHH
ELSETVEKAASKVPAGRQSAYFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAATAPMTADRKAVCQWNAAEAKK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCC
GNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
CCEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLY
CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEHHCCCCEEEEEEEE
EVNRNSSGI
EECCCCCCC
>Mature Secondary Structure
MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTV
CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
LSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSH
HHHHHEEECCCCCEEEECCCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCCC
GTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSPSVEYRGIFINDEDWGL
CCEEHHHHHHHHHCCCCHHHHCCCCCCHHHHEEECCHHHHHCCCCCEEEEEEECCCCCCC
MPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCHHHHHH
YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGM
HCEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCC
RGVHDGKMQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHC
LQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTMSPSLI
CCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHH
YQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL
HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEHHCCHHHHCCCCHHHHHHHHHHHHH
GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYS
CHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHH
ELSETVEKAASKVPAGRQSAYFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAATAPMTADRKAVCQWNAAEAKK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCC
GNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD
CCEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC
GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLY
CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEHHCCCCEEEEEEEE
EVNRNSSGI
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA