| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348367
Identifier: 29348367
GI number: 29348367
Start: 3725843
End: 3728212
Strand: Reverse
Name: 29348367
Synonym: BT_2958
Alternate gene names: NA
Gene position: 3728212-3725843 (Counterclockwise)
Preceding gene: 29348368
Following gene: 29348365
Centisome position: 59.55
GC content: 48.78
Gene sequence:
>2370_bases ATGAGAAATAGAATTTTATTTTCTTTCCTTGCTTGGGTAGCAGTGATCGTGTCCGTTCAGGGTAAACAAAAAGATTTTGT TTTGCAGTCCGGTCAGCCGGTTGCGATAGCTTGCAGCGGTTCGGAAGCACCGGTGGTGCGTACTTCGCTGGACTTGTTGT CCCGTGACCTTCAGACTGTATTGTCGGCAACTGCCCATATAGACACAAACACCGGAAACATCATAGTAGGAACGATCGGA CAGAGCAAGCTGATTGAGCAGGCAGGCATCGATATTTCCGCATTAAAAAACAAAAAGCAGGCTTTCATGCTCGCCGTCTC AGAAGATGGAAAGCTAGTAGTAGCCGGCAGCGACAGTCACGGTACAGCCTACGGCATACTTGAAATATCCCGTCTGCTGG GCGTTTCCCCTTGGGAATGGTGGGCAGATGTGACTCCGGAGAAGAAAGAGACATTTCGTCTTTCGGGCAAGTTTAGAGAG TTGCAGTCTCCTTCTGTGGAGTATCGGGGCATCTTTATTAATGATGAAGATTGGGGACTGATGCCTTGGAGTAACAAGAC CTACGAACCGTCGGATGTGAAAGGAGAAATCGGGCCGCGTACCAACGAACGTATTTTTGAGTTGCTGCTTCGTTTGCGGG CCAATACCTACTGGCCTGCCATGCACGAGTGTACCCTTCCTTTCTTTCTGACGAAGGGCAATCGGGAAGCAGCGAAAAAG TATGGCATCTTTATGGGAGCTTCCCACTGCGAACCGATGGCGTGCAATGCTGCCGGAGAATGGAAAATACGTGGAAAAGG AGCATACGATTACGTGAATAACAGTCCGGCCGTTTATCAGTTTTGGGAAGATCGTGTGAAAGAAGTTGCCGGACAAGAGA TACTTTACACGCTGGGTATGCGTGGCGTTCACGATGGAAAGATGCAGGGAGCCAAGACGGTAGAAGAGCAGAAAGCCGTC CTGGACCGGGTATTTGTTGACCAGCGCGGCTTGCTCGAAAAGTACGTGAATAAAGACGTAACACAAGTGCCGCAGGTCTT TATTCCTTATAAGGAAGTGCTCGATATTTATCATGCGGGGCTGCAAGTACCCGAAGACGTGACCTTGATGTGGTGTGATG ATAACTACGGCTATATCCGCCATTTCCCCACTGCCGAAGAGCGTGCCCGTAAAGGCGGCAACGGAGTCTATTATCATGTT TCCTACTGGGGACGCCCGCACGATCATTTATGGTTGAGCACCATGAGTCCATCACTCATTTATCAACAGATGAAGCAGGC TTACGATCAGGGAATACAGAAAATGTGGATACTGAACGTCGGCGACATCAAGCCTGCCGAGTATCAGATAGAACTGTTCA TGGATATGGCATGGAATCTGGATAAGGTATCTTCCGAAGGAGTGACCGCACATCTGAAACATTGGCTGGAACGGGAACTG GGAACCTCTTGTGCAAAGACCATCCTCTCCGTTATGCAGGAACATTATCGCTTGGCACATATCCGCAAACCCGAATTTAT GGGAAATACACGGGAGGAAGAAAAGAATCCGGTCTATCGGGTAGTCAAAGACTTACCGTGGAGCGAAAGAGAGATAAACG AACGTCTGAATGCTTACAGCGAACTTTCGGAAACAGTAGAGAAAGCTGCTTCTAAAGTACCTGCCGGTAGGCAGAGTGCT TACTTCGAACTGGTGAAATATCCCGTACAGGCTGCGACACAAATGAATCGCAAACTGTTATACGCCCAATTGGCACGCCA CGATAAGGAAGACTGGGAAAAGAGTGATGCCGCTTACGACAGCATTGCTGCACTGACTCAACACTATAACTCATTGGAGA ATGGAAAATGGAATCGCATGATGGACTTCAAACCCCGCAAGCTCCCTGTATTCAACCGTGTGGAAAGAAAGGCGGCTACT GCTCCGATGACAGCGGACCGTAAAGCAGTCTGTCAATGGAACGCGGCGGAGGCAAAGAAGGGAAACGCTATTGTCTGCGA AGGTTTGGGATATGAAAGCAAAGCCGCAGAGATAAAAAAAGGCGATGCGCTGACTTTCTCCTTTGGCAATCTGAAAACGG ACTCGGTAGAGGTGGATATCCGGTTACTTCCCAACCATCCGGTGCATGGCGATAAGTTGCGTTTCACGGTTTCTCTGGAT GGTGCCGAGCCTGAAGTGATAGCTTACGAAACGAAGGGACGCAGCGAGGAATGGAAAGAGAACGTGCTTCGTAATCAGGC AATCCGGAAAATCGTACTTCCCGTTACGGGTAAGAAATCACATCAACTGGTCATCAAGGCATTGGATGAGGGAGTGATAC TGGATCAGGTAATGCTTTATGAGGTGAATCGTAACAGTTCAGGTATTTGA
Upstream 100 bases:
>100_bases TTACGGGCATCAGCCCCACATGGACTGATAAAACGAAGAGAATCTATGGCAGCGACGATTGCTTTGTGACCATTACTGAT ATTGTAAAACTGTAATATTT
Downstream 100 bases:
>100_bases AGTTTCTGTCATTCGGAAAGATATCTAAGGGAACGCAGTGAAGGATCTCTTCTCTCTTGTACAGTAAGAGGAGATTCTTC CTCTCTTTGCTTACCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI
Sequences:
>Translated_789_residues MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI >Mature_789_residues MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIG QSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRE LQSPSVEYRGIFINDEDWGLMPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGMRGVHDGKMQGAKTVEEQKAV LDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHV SYWGRPHDHLWLSTMSPSLIYQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSA YFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAAT APMTADRKAVCQWNAAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLYEVNRNSSGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89478; Mature: 89478
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTV CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH LSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSH HHHHHEEECCCCCEEEECCCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCCC GTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSPSVEYRGIFINDEDWGL CCEEHHHHHHHHHCCCCHHHHCCCCCCHHHHEEECCHHHHHCCCCCEEEEEEECCCCCCC MPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCHHHHHH YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGM HCEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCC RGVHDGKMQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHC LQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTMSPSLI CCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHH YQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEHHCCHHHHCCCCHHHHHHHHHHHHH GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYS CHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHH ELSETVEKAASKVPAGRQSAYFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAATAPMTADRKAVCQWNAAEAKK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCC GNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD CCEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLY CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEHHCCCCEEEEEEEE EVNRNSSGI EECCCCCCC >Mature Secondary Structure MRNRILFSFLAWVAVIVSVQGKQKDFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTV CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH LSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISALKNKKQAFMLAVSEDGKLVVAGSDSH HHHHHEEECCCCCEEEECCCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCCC GTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSPSVEYRGIFINDEDWGL CCEEHHHHHHHHHCCCCHHHHCCCCCCHHHHEEECCHHHHHCCCCCEEEEEEECCCCCCC MPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAMHECTLPFFLTKGNREAAKK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCHHHHHH YGIFMGASHCEPMACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGM HCEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCC RGVHDGKMQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHC LQVPEDVTLMWCDDNYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTMSPSLI CCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHH YQQMKQAYDQGIQKMWILNVGDIKPAEYQIELFMDMAWNLDKVSSEGVTAHLKHWLEREL HHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEHHCCHHHHCCCCHHHHHHHHHHHHH GTSCAKTILSVMQEHYRLAHIRKPEFMGNTREEEKNPVYRVVKDLPWSEREINERLNAYS CHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHH ELSETVEKAASKVPAGRQSAYFELVKYPVQAATQMNRKLLYAQLARHDKEDWEKSDAAYD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SIAALTQHYNSLENGKWNRMMDFKPRKLPVFNRVERKAATAPMTADRKAVCQWNAAEAKK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCC GNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLD CCEEEEECCCCCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC GAEPEVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVMLY CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEHHCCCCEEEEEEEE EVNRNSSGI EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA