Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348335

Identifier: 29348335

GI number: 29348335

Start: 3676619

End: 3677737

Strand: Reverse

Name: 29348335

Synonym: BT_2926

Alternate gene names: NA

Gene position: 3677737-3676619 (Counterclockwise)

Preceding gene: 29348336

Following gene: 29348334

Centisome position: 58.75

GC content: 32.53

Gene sequence:

>1119_bases
ATGAGAAAAAAAGTGATTATTTCTTTGATATATGTATCAATAGTATTGACTATTCCCCTGGCAGTTGCCTGTCAGGGGTC
AAATGACGATAGTATAGATCCTATACTTTTGGAACATGTAAAATCAGTGATAGATTTCTATCCTGATTGTGGGAAGACTT
TAAAAGTTTCTCAGTTTGATTCTAGAAAAACTTATGTATATAGTATGTGGCCTAAGCAAAGTGGCTTTTGGTTTGATACT
GGTCAAAATGGGGATGAACTTAGGTTAATTTTGCCTACAAATGCTATGAGATATAAAGATAAATATATTCTTTTTTATCT
GGAAGGTAAAAAGAGACTAAGTGAAAAGGAAATTAGTAGACTATTAGGCATATCGTCTCAGGATGATATGCCTGATTCTC
GCGAAATTGATCAACGGATTTGGATATATGTAAAAGACAAGGAATCGGGTAAATCTGCTTTTGAGCAAATTGAATATGGA
ACTAAAATTTGGGAATATCCTAATTTACGATATTTTAATGGTGGAGATAAAGATTCCGCTGTAATTGATATTGCAATTTA
TGATATAAGTGTTCATGGAGAAAAAGGGAAGTCTGAAAAGTTTTCTTCGCCTGATAAGATTTCATTAAATATGTCTGTCT
ATAATAAATCGGATTCTAGTCTTTTGATAGGATTGAATCCTGATTTATATGGTAGCTTTATAATAAAAAACGGAGAATAT
TCAATGCCACTTATGGCAGATGTAGAAGTCAATAGGTATTTTGGTGAATTTCATGAATATTCTCCCGGTTTATATTCCAT
TGCTCCTCATGGAAGAATGAGTTTTTATCTTAGCACTGCACAACAACCTATTAAATTGAAAGATACGTCTCCACATGAAT
ATGTTCACAAATTATATGATTTATTTTACGACTCCATTTGTTATGTGCCTGCACCTACTATTATTCAAATGCCTGATACT
ATTCAAGGGATTGTTTGGAATAAAGAATTTACAGCATATTTCCCTTTTGGTAGCTGGTATCATTTTTTTGTAAATGACAG
TATATACGACATATATCCTAATGGTGAAGTAGCTGGATATGCGATGGATAAGCATCGCTATAAATGGTTTGAAGAATAG

Upstream 100 bases:

>100_bases
ATATTATTAATTATACTGATCAAAACAATAGCACATATTCTATTAAAGTTAATTCCATGAATGATTTAATGCGATATATA
TTTCAACAATTAAGATGATA

Downstream 100 bases:

>100_bases
TGCGAAGCAACAACTGAAGAAGATTTTTAGTGAGGGTATATTAGATTTTGCAATATTCCTATAAATCTTTAATTTATATC
ATAAATGAAACCGATAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRKKVIISLIYVSIVLTIPLAVACQGSNDDSIDPILLEHVKSVIDFYPDCGKTLKVSQFDSRKTYVYSMWPKQSGFWFDT
GQNGDELRLILPTNAMRYKDKYILFYLEGKKRLSEKEISRLLGISSQDDMPDSREIDQRIWIYVKDKESGKSAFEQIEYG
TKIWEYPNLRYFNGGDKDSAVIDIAIYDISVHGEKGKSEKFSSPDKISLNMSVYNKSDSSLLIGLNPDLYGSFIIKNGEY
SMPLMADVEVNRYFGEFHEYSPGLYSIAPHGRMSFYLSTAQQPIKLKDTSPHEYVHKLYDLFYDSICYVPAPTIIQMPDT
IQGIVWNKEFTAYFPFGSWYHFFVNDSIYDIYPNGEVAGYAMDKHRYKWFEE

Sequences:

>Translated_372_residues
MRKKVIISLIYVSIVLTIPLAVACQGSNDDSIDPILLEHVKSVIDFYPDCGKTLKVSQFDSRKTYVYSMWPKQSGFWFDT
GQNGDELRLILPTNAMRYKDKYILFYLEGKKRLSEKEISRLLGISSQDDMPDSREIDQRIWIYVKDKESGKSAFEQIEYG
TKIWEYPNLRYFNGGDKDSAVIDIAIYDISVHGEKGKSEKFSSPDKISLNMSVYNKSDSSLLIGLNPDLYGSFIIKNGEY
SMPLMADVEVNRYFGEFHEYSPGLYSIAPHGRMSFYLSTAQQPIKLKDTSPHEYVHKLYDLFYDSICYVPAPTIIQMPDT
IQGIVWNKEFTAYFPFGSWYHFFVNDSIYDIYPNGEVAGYAMDKHRYKWFEE
>Mature_372_residues
MRKKVIISLIYVSIVLTIPLAVACQGSNDDSIDPILLEHVKSVIDFYPDCGKTLKVSQFDSRKTYVYSMWPKQSGFWFDT
GQNGDELRLILPTNAMRYKDKYILFYLEGKKRLSEKEISRLLGISSQDDMPDSREIDQRIWIYVKDKESGKSAFEQIEYG
TKIWEYPNLRYFNGGDKDSAVIDIAIYDISVHGEKGKSEKFSSPDKISLNMSVYNKSDSSLLIGLNPDLYGSFIIKNGEY
SMPLMADVEVNRYFGEFHEYSPGLYSIAPHGRMSFYLSTAQQPIKLKDTSPHEYVHKLYDLFYDSICYVPAPTIIQMPDT
IQGIVWNKEFTAYFPFGSWYHFFVNDSIYDIYPNGEVAGYAMDKHRYKWFEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43103; Mature: 43103

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKVIISLIYVSIVLTIPLAVACQGSNDDSIDPILLEHVKSVIDFYPDCGKTLKVSQFD
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
SRKTYVYSMWPKQSGFWFDTGQNGDELRLILPTNAMRYKDKYILFYLEGKKRLSEKEISR
CCCEEEEEECCCCCCCEEECCCCCCEEEEEECCCCEEECCEEEEEEECCCCCCCHHHHHH
LLGISSQDDMPDSREIDQRIWIYVKDKESGKSAFEQIEYGTKIWEYPNLRYFNGGDKDSA
HHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCCEEEECCCCCCCE
VIDIAIYDISVHGEKGKSEKFSSPDKISLNMSVYNKSDSSLLIGLNPDLYGSFIIKNGEY
EEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC
SMPLMADVEVNRYFGEFHEYSPGLYSIAPHGRMSFYLSTAQQPIKLKDTSPHEYVHKLYD
CCCEEEEEEHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEECCCCHHHHHHHHHH
LFYDSICYVPAPTIIQMPDTIQGIVWNKEFTAYFPFGSWYHFFVNDSIYDIYPNGEVAGY
HHHHCEEECCCCCEEECCCCCEEEEECCEEEEEECCCCEEEEEECCEEEEECCCCCEEEE
AMDKHRYKWFEE
EECCCCCCCCCC
>Mature Secondary Structure
MRKKVIISLIYVSIVLTIPLAVACQGSNDDSIDPILLEHVKSVIDFYPDCGKTLKVSQFD
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
SRKTYVYSMWPKQSGFWFDTGQNGDELRLILPTNAMRYKDKYILFYLEGKKRLSEKEISR
CCCEEEEEECCCCCCCEEECCCCCCEEEEEECCCCEEECCEEEEEEECCCCCCCHHHHHH
LLGISSQDDMPDSREIDQRIWIYVKDKESGKSAFEQIEYGTKIWEYPNLRYFNGGDKDSA
HHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCCEEEECCCCCCCE
VIDIAIYDISVHGEKGKSEKFSSPDKISLNMSVYNKSDSSLLIGLNPDLYGSFIIKNGEY
EEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC
SMPLMADVEVNRYFGEFHEYSPGLYSIAPHGRMSFYLSTAQQPIKLKDTSPHEYVHKLYD
CCCEEEEEEHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEECCCCHHHHHHHHHH
LFYDSICYVPAPTIIQMPDTIQGIVWNKEFTAYFPFGSWYHFFVNDSIYDIYPNGEVAGY
HHHHCEEECCCCCEEECCCCCEEEEECCEEEEEECCCCEEEEEECCEEEEECCCCCEEEE
AMDKHRYKWFEE
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA