| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348334
Identifier: 29348334
GI number: 29348334
Start: 3675806
End: 3676408
Strand: Reverse
Name: 29348334
Synonym: BT_2925
Alternate gene names: NA
Gene position: 3676408-3675806 (Counterclockwise)
Preceding gene: 29348335
Following gene: 29348333
Centisome position: 58.73
GC content: 30.68
Gene sequence:
>603_bases ATGTATTTTCGTGCGAATTTGAAGTACCCTACTGTGAATGAGCTTTGGGACTATTGTTGGAAAATAACGAATGAAGTTAA TGATAACACATTTTTATCATTTGATGACTTTGATAAGGCGGCATATAAAAATGTCTCAGGTCGAGAAGAGCTTTTGCAGC ATTTATCTTTATATAAAAAGGAAATTTCGTTCCAATTTAAGAAAGGAGCAATGTTTGTTCTTTGGAAGAATAAAAAATGG TTTAAAATTGAGTTTGATTTAGGTGAAATGATAGCTGATAATGGTTATAAGTTTGTTTACTTCTATGATATGCAAGGCAA TTACAGTCTGGATTTTGACTATGAAGAAGATTTTCAAAAAATAAGAAAGGAAGTACGTGATAAATGCGTACCAGATACTA CATTGTGGAGTGAATTTCACACGTGTCTCCTGAGATTTGATAGAATTAAAGGATATCAGCTATATTATCCCTCGAAAAAT AAGATTAAGGAAAATATTTACCTTAAAGAACTAGGATGTGCTTTGGATAATTTTCTTTTAAACCGAAATCTGCAAATGAT TCAATTTGTTACTAATTTGCCTCAATCGTATTTGTATAAGTAA
Upstream 100 bases:
>100_bases AATCGTACTATTATTAGTCCTATATAGTTGTAAAAGTATAGCTTTATATGATACTTCTACTGATTATGACTTTAAATTTG ATTTATACAGTCAAGTAAAG
Downstream 100 bases:
>100_bases AGTTTATGCAGTTTCTGTTTGCCCTGATATGGATTGGCTAAATAAAGTTAACCATATTAGGGCATTTCAGTTAATTCTAC TAGTGCTGTCTTTCATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MYFRANLKYPTVNELWDYCWKITNEVNDNTFLSFDDFDKAAYKNVSGREELLQHLSLYKKEISFQFKKGAMFVLWKNKKW FKIEFDLGEMIADNGYKFVYFYDMQGNYSLDFDYEEDFQKIRKEVRDKCVPDTTLWSEFHTCLLRFDRIKGYQLYYPSKN KIKENIYLKELGCALDNFLLNRNLQMIQFVTNLPQSYLYK
Sequences:
>Translated_200_residues MYFRANLKYPTVNELWDYCWKITNEVNDNTFLSFDDFDKAAYKNVSGREELLQHLSLYKKEISFQFKKGAMFVLWKNKKW FKIEFDLGEMIADNGYKFVYFYDMQGNYSLDFDYEEDFQKIRKEVRDKCVPDTTLWSEFHTCLLRFDRIKGYQLYYPSKN KIKENIYLKELGCALDNFLLNRNLQMIQFVTNLPQSYLYK >Mature_200_residues MYFRANLKYPTVNELWDYCWKITNEVNDNTFLSFDDFDKAAYKNVSGREELLQHLSLYKKEISFQFKKGAMFVLWKNKKW FKIEFDLGEMIADNGYKFVYFYDMQGNYSLDFDYEEDFQKIRKEVRDKCVPDTTLWSEFHTCLLRFDRIKGYQLYYPSKN KIKENIYLKELGCALDNFLLNRNLQMIQFVTNLPQSYLYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24379; Mature: 24379
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFRANLKYPTVNELWDYCWKITNEVNDNTFLSFDDFDKAAYKNVSGREELLQHLSLYKK CEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHH EISFQFKKGAMFVLWKNKKWFKIEFDLGEMIADNGYKFVYFYDMQGNYSLDFDYEEDFQK HHCEEECCCEEEEEEECCEEEEEEECHHHHHHCCCEEEEEEEECCCCEEECCCCHHHHHH IRKEVRDKCVPDTTLWSEFHTCLLRFDRIKGYQLYYPSKNKIKENIYLKELGCALDNFLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH NRNLQMIQFVTNLPQSYLYK HCCHHHHHHHHHCCHHHCCC >Mature Secondary Structure MYFRANLKYPTVNELWDYCWKITNEVNDNTFLSFDDFDKAAYKNVSGREELLQHLSLYKK CEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHH EISFQFKKGAMFVLWKNKKWFKIEFDLGEMIADNGYKFVYFYDMQGNYSLDFDYEEDFQK HHCEEECCCEEEEEEECCEEEEEEECHHHHHHCCCEEEEEEEECCCCEEECCCCHHHHHH IRKEVRDKCVPDTTLWSEFHTCLLRFDRIKGYQLYYPSKNKIKENIYLKELGCALDNFLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH NRNLQMIQFVTNLPQSYLYK HCCHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA