Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is yvnB [H]

Identifier: 29348324

GI number: 29348324

Start: 3656629

End: 3657603

Strand: Reverse

Name: yvnB [H]

Synonym: BT_2915

Alternate gene names: 29348324

Gene position: 3657603-3656629 (Counterclockwise)

Preceding gene: 29348325

Following gene: 29348323

Centisome position: 58.42

GC content: 38.77

Gene sequence:

>975_bases
ATGAAAAATCAAATGAAATGGATAGCTTTATTGACTACGGCAGTTTTTATTTTCTCGGGTTGTAAAACACAAAAACAGGT
CAGACTGGTTTTGTTGCCGGATATACAAACTTATTCACGGCTTTATCCCGATATTTTAAAATCGCAAACTCAATGGGCAA
TAGATCATGCAGATAGTATTGACTTTGTTTTGCAACAGGGGGACATGACTGATCACAATGTCGATAAGGAGTGGGAGGTT
GCAGCTGCCGCTTTGAATACTATGGACAACCAAGTTCCTTATGCTTTTGTAATGGGAAATCACGATTTAGGTAAAAATTC
GAATAAAAGAGATTCGGAACTCTTCAATCGATATTTTCCTTATGATAAATACAGTAAGACGAGAAATTTCGGTGGTGCAT
TTGAAGAAGGGAAAATGGATAATGTGTGGTATACTTTCAAGGCTGCCGGATTGAAATGGCTGATTCTTTGTTTGGAATTT
GGACCTCGTACTAGTGTGCTTGACTGGGCAGGTGAGATTGTGAAGAAACATCCGCATCATAAGGTGATTATCAATACGCA
TGCATATATGTACTCGGATGATACACGTATGGGAGAAGGCGATCGTTGGCTGCCGCAGAAATACGGTTTAGGCAAAGATA
CCGGTGAAAATGCGGTGAATAACGGTGAGCAAATGTGGGATAAGTTGGTTAGTAAATATCCTAATATTCTTTTTGTATTC
AGTGGGCATGTACTGAATAGCGGTGTTGGGACCTTAGTCAGTATAGGTGATCATGGTAATAAAGTGTTTCAGATGTTAGC
CAATTTTCAAGATGGAGTGAAAGGGACGAACAGAGGGCAAACCGGTTTCTTGCGTATTGTGGATATAGACGTGAAGAAAC
AGCAAGTCAGAGTAAAAACTTATTCTCCCTATCTGAAGGAATATAAGAATGATGTTAAAAATAAATTCTCTTTCGAAGGG
GTAAACTTTAAATGA

Upstream 100 bases:

>100_bases
GTTCTATTAAAAACTAGGATTAAATCTTAGGGAAGTATTGAAAAGAAAGTAGATGTAACTAAATAAACTTCTGAGAAAGT
TGAATAAAGAGTAGAAACAG

Downstream 100 bases:

>100_bases
TATAGTTTTAGTATTCTGGAGGATGTGGCTATGAAATACACTCAATCTTTTTGTTTTGTAAGTGTGATTGTTTTGTCGTC
TTCTGTTCATCTCCATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV
AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF
GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF
SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG
VNFK

Sequences:

>Translated_324_residues
MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV
AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF
GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF
SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG
VNFK
>Mature_324_residues
MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV
AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF
GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF
SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG
VNFK

Specific function: Unknown

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR011401 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 37140; Mature: 37140

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSI
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHEECCCCCCC
DFVLQQGDMTDHNVDKEWEVAAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFP
EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
YDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEFGPRTSVLDWAGEIVKKHPHH
CCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCC
KVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF
EEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEE
SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKT
ECCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEC
YSPYLKEYKNDVKNKFSFEGVNFK
CCHHHHHHHHHHHHCEECCCCCCC
>Mature Secondary Structure
MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSI
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHEECCCCCCC
DFVLQQGDMTDHNVDKEWEVAAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFP
EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
YDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEFGPRTSVLDWAGEIVKKHPHH
CCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCC
KVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF
EEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEE
SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKT
ECCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEC
YSPYLKEYKNDVKNKFSFEGVNFK
CCHHHHHHHHHHHHCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]