| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348320
Identifier: 29348320
GI number: 29348320
Start: 3647317
End: 3649284
Strand: Reverse
Name: 29348320
Synonym: BT_2911
Alternate gene names: NA
Gene position: 3649284-3647317 (Counterclockwise)
Preceding gene: 29348321
Following gene: 29348319
Centisome position: 58.29
GC content: 38.77
Gene sequence:
>1968_bases ATGCGCAAAGGTGTATTGACAAAGACATCTATAAAAGTTCTTTTGAGCTTATTATTGCTTATTGGATCATTTGAGCCTGT TGTATCTGCGTCATATGGAGGGAGTAAACCTGCAGATGTCACTTTTGAATCTTATTTTCCATTAAGAGAAGTACGTTTGC TGGACAGTCCTTTTCTTGATTTACAACGAAAAGGAAAGGAATATCTTCTATGGTTGAATCCTGATTCATTATTGCATTTT TATCGAATAGAGGCAGGATTACCTTCAAAAGCTGCACCCTATGCAGGTTGGGAATCACAAGATGTATGGGGTGCCGGACC TTTGCGCGGAGGTTTCTTAGGATTCTATCTTTCTTCTGTATCTATGATGTATCAGTCAACCGATGATAAAAGGTTATTAA AACGTTTAAAGTATGTACTGAAAGAGCTTGAACTATGCCAAAAAGCAGGGAAGGATGGTTTCTTACTAGGGCTCAAAGAT GGTAGAAAGCTATTTGCTGAAGTTGCTTCTGGAAAGATAAAAACAAATAATCCTACAGTAAACGGTGCATGGGCTCCGGT TTATCTGATTAATAAAATGCTTCTTGGGCTTTCTGCTGCCTATACGCAATGTCAAATGGAAGAGGCATTACCTATATTAA TCCGATTGGCTGATTGGTTTGGATATCAAGTGTTGGACAAACTGACAGATGATCAGATTCAGCGGTTGCTTATCTGCGAA CATGGCTCTATCAATGAATCTTATGTGGAGGCTTATGAACTAACCGGAGAGAAGCGTTTTCTTGATTGGGCGCGTCGGTT GAACGACCATGCGATGTGGGGTCCTCTGTCTGAGGGGAAGGATATTCTTTTTGGATGGCATGCTAACACGCAGATTCCAA AGTTTACAGGATTTCATAAGTATTATCAGTTTACGGGTGATGAACGTTTCCTGACAGCAGCAACTAATTTTTGGAATATT GTAACTCAGAATCATACATGGGTAATAGGGGGAAACAGTACTGGGGAACATTTTTTTCCGAAAGAGGAGTTCGCTGATCG GGTACTTTTGGTAGGAGGTCCGGAAACTTGTAACTCAGTGAATATGCTACGTTTGACTGAATCTCTTTTCTGTCAGTATC CTGATGCAGCCAAAGCAAGTTATTATGAGCGGGTATTGTTTAATCATATTTTGTCAGCCTACGATCCAGAAAAGGGCATG TGTTGCTATTTCACCTCTATGCGTCCGGGGCATTATAGAATTTATGCTTCACGTGACAGTTCTTTTTGGTGCTGTGGACA TACTGGTCTGGAGAGTCCGGCAAAACTTAGCAAGTTTATTTATAGTCATTCAAAGAGAATTATTGATGGAGATCCTGATA TTAGAGTCAATTTGTTTATACCTTCTATTCTTTTCTGGAAAGAAAAAGGAATAGAACTTATTCAGCAAAACCGACTCCCT GAATCGGAGCAAGTGAGCTTTATGCTGAATTTAAAGAAAAAGCAAGAATTGATACTTCGTATTCGTAAACCGGATTGGGC GGATAAAGTAACTTTCATTATTAATGGAAAAGTAGAATATCCTATCCTTGATAAGGATGGATATTGGGTGGTTAACAGAA CTTGGGCACGAAAGAATAAAATCATATTGCAACTTCCGATGCATGTATATGTCGAAAGTTTGATGGGTTCTGACCGTTAT GCTGCATTACTATATGGTCCATACGTACTTGCCGGGCGCATGGGAACTGAGAATTTGCCTACTACTTTTTGGGGAAAGAT GAACAATACGGCAATGAATAAGATCGATTTGAACAAGATTCCGGTATTTAGGATGCCACTTAAGCAGATTCCTGCTTATG TGAAATCAATTTCTACAGATACATTAAAATTTAAAATAGATTTGAAGGAATTTGATAATGTAGTTGTAGAACCGTTTTAT AAAGTACATTTTGAACGTTATGCAGTGTATTGGCCTATAAGCTACTAA
Upstream 100 bases:
>100_bases AACATTATCGGAAAGATTCACCTTTGCTGGAATCGGGTTTGATAGGCCCTGTCCGATTAGTTTTTGCAAAGAAGATAGAA TTAAAATAATTGATATATTT
Downstream 100 bases:
>100_bases CATAAATGCAATAACATATATAAATAATACGTTTCAGCCGTACATCTCGGTAATACTCAGTAGTACATGTGGGTATTACC CAGTTGTACATCTTGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MRKGVLTKTSIKVLLSLLLLIGSFEPVVSASYGGSKPADVTFESYFPLREVRLLDSPFLDLQRKGKEYLLWLNPDSLLHF YRIEAGLPSKAAPYAGWESQDVWGAGPLRGGFLGFYLSSVSMMYQSTDDKRLLKRLKYVLKELELCQKAGKDGFLLGLKD GRKLFAEVASGKIKTNNPTVNGAWAPVYLINKMLLGLSAAYTQCQMEEALPILIRLADWFGYQVLDKLTDDQIQRLLICE HGSINESYVEAYELTGEKRFLDWARRLNDHAMWGPLSEGKDILFGWHANTQIPKFTGFHKYYQFTGDERFLTAATNFWNI VTQNHTWVIGGNSTGEHFFPKEEFADRVLLVGGPETCNSVNMLRLTESLFCQYPDAAKASYYERVLFNHILSAYDPEKGM CCYFTSMRPGHYRIYASRDSSFWCCGHTGLESPAKLSKFIYSHSKRIIDGDPDIRVNLFIPSILFWKEKGIELIQQNRLP ESEQVSFMLNLKKKQELILRIRKPDWADKVTFIINGKVEYPILDKDGYWVVNRTWARKNKIILQLPMHVYVESLMGSDRY AALLYGPYVLAGRMGTENLPTTFWGKMNNTAMNKIDLNKIPVFRMPLKQIPAYVKSISTDTLKFKIDLKEFDNVVVEPFY KVHFERYAVYWPISY
Sequences:
>Translated_655_residues MRKGVLTKTSIKVLLSLLLLIGSFEPVVSASYGGSKPADVTFESYFPLREVRLLDSPFLDLQRKGKEYLLWLNPDSLLHF YRIEAGLPSKAAPYAGWESQDVWGAGPLRGGFLGFYLSSVSMMYQSTDDKRLLKRLKYVLKELELCQKAGKDGFLLGLKD GRKLFAEVASGKIKTNNPTVNGAWAPVYLINKMLLGLSAAYTQCQMEEALPILIRLADWFGYQVLDKLTDDQIQRLLICE HGSINESYVEAYELTGEKRFLDWARRLNDHAMWGPLSEGKDILFGWHANTQIPKFTGFHKYYQFTGDERFLTAATNFWNI VTQNHTWVIGGNSTGEHFFPKEEFADRVLLVGGPETCNSVNMLRLTESLFCQYPDAAKASYYERVLFNHILSAYDPEKGM CCYFTSMRPGHYRIYASRDSSFWCCGHTGLESPAKLSKFIYSHSKRIIDGDPDIRVNLFIPSILFWKEKGIELIQQNRLP ESEQVSFMLNLKKKQELILRIRKPDWADKVTFIINGKVEYPILDKDGYWVVNRTWARKNKIILQLPMHVYVESLMGSDRY AALLYGPYVLAGRMGTENLPTTFWGKMNNTAMNKIDLNKIPVFRMPLKQIPAYVKSISTDTLKFKIDLKEFDNVVVEPFY KVHFERYAVYWPISY >Mature_655_residues MRKGVLTKTSIKVLLSLLLLIGSFEPVVSASYGGSKPADVTFESYFPLREVRLLDSPFLDLQRKGKEYLLWLNPDSLLHF YRIEAGLPSKAAPYAGWESQDVWGAGPLRGGFLGFYLSSVSMMYQSTDDKRLLKRLKYVLKELELCQKAGKDGFLLGLKD GRKLFAEVASGKIKTNNPTVNGAWAPVYLINKMLLGLSAAYTQCQMEEALPILIRLADWFGYQVLDKLTDDQIQRLLICE HGSINESYVEAYELTGEKRFLDWARRLNDHAMWGPLSEGKDILFGWHANTQIPKFTGFHKYYQFTGDERFLTAATNFWNI VTQNHTWVIGGNSTGEHFFPKEEFADRVLLVGGPETCNSVNMLRLTESLFCQYPDAAKASYYERVLFNHILSAYDPEKGM CCYFTSMRPGHYRIYASRDSSFWCCGHTGLESPAKLSKFIYSHSKRIIDGDPDIRVNLFIPSILFWKEKGIELIQQNRLP ESEQVSFMLNLKKKQELILRIRKPDWADKVTFIINGKVEYPILDKDGYWVVNRTWARKNKIILQLPMHVYVESLMGSDRY AALLYGPYVLAGRMGTENLPTTFWGKMNNTAMNKIDLNKIPVFRMPLKQIPAYVKSISTDTLKFKIDLKEFDNVVVEPFY KVHFERYAVYWPISY
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75339; Mature: 75339
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGVLTKTSIKVLLSLLLLIGSFEPVVSASYGGSKPADVTFESYFPLREVRLLDSPFLD CCCCCCCHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCEEECCCCCHHHHHHHCCCCHH LQRKGKEYLLWLNPDSLLHFYRIEAGLPSKAAPYAGWESQDVWGAGPLRGGFLGFYLSSV HHHCCCEEEEEECHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SMMYQSTDDKRLLKRLKYVLKELELCQKAGKDGFLLGLKDGRKLFAEVASGKIKTNNPTV HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCEEECCCCCC NGAWAPVYLINKMLLGLSAAYTQCQMEEALPILIRLADWFGYQVLDKLTDDQIQRLLICE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEC HGSINESYVEAYELTGEKRFLDWARRLNDHAMWGPLSEGKDILFGWHANTQIPKFTGFHK CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH YYQFTGDERFLTAATNFWNIVTQNHTWVIGGNSTGEHFFPKEEFADRVLLVGGPETCNSV HEEECCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCCCHHHHCCEEEEEECCCCCCCC NMLRLTESLFCQYPDAAKASYYERVLFNHILSAYDPEKGMCCYFTSMRPGHYRIYASRDS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCC SFWCCGHTGLESPAKLSKFIYSHSKRIIDGDPDIRVNLFIPSILFWKEKGIELIQQNRLP CEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCEEEEHHHCHHHHHHCCCC ESEQVSFMLNLKKKQELILRIRKPDWADKVTFIINGKVEYPILDKDGYWVVNRTWARKNK CHHCEEEEEECHHCCEEEEEECCCCCCCEEEEEEECEEEEEEECCCCEEEEEEEECCCCC IILQLPMHVYVESLMGSDRYAALLYGPYVLAGRMGTENLPTTFWGKMNNTAMNKIDLNKI EEEEECHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCCCCCEEECCCC PVFRMPLKQIPAYVKSISTDTLKFKIDLKEFDNVVVEPFYKVHFERYAVYWPISY CEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCHHHCCHHHEEEEEEEEEEECCC >Mature Secondary Structure MRKGVLTKTSIKVLLSLLLLIGSFEPVVSASYGGSKPADVTFESYFPLREVRLLDSPFLD CCCCCCCHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCEEECCCCCHHHHHHHCCCCHH LQRKGKEYLLWLNPDSLLHFYRIEAGLPSKAAPYAGWESQDVWGAGPLRGGFLGFYLSSV HHHCCCEEEEEECHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SMMYQSTDDKRLLKRLKYVLKELELCQKAGKDGFLLGLKDGRKLFAEVASGKIKTNNPTV HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCEEECCCCCC NGAWAPVYLINKMLLGLSAAYTQCQMEEALPILIRLADWFGYQVLDKLTDDQIQRLLICE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEC HGSINESYVEAYELTGEKRFLDWARRLNDHAMWGPLSEGKDILFGWHANTQIPKFTGFHK CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH YYQFTGDERFLTAATNFWNIVTQNHTWVIGGNSTGEHFFPKEEFADRVLLVGGPETCNSV HEEECCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCCCHHHHCCEEEEEECCCCCCCC NMLRLTESLFCQYPDAAKASYYERVLFNHILSAYDPEKGMCCYFTSMRPGHYRIYASRDS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCC SFWCCGHTGLESPAKLSKFIYSHSKRIIDGDPDIRVNLFIPSILFWKEKGIELIQQNRLP CEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCEEEEHHHCHHHHHHCCCC ESEQVSFMLNLKKKQELILRIRKPDWADKVTFIINGKVEYPILDKDGYWVVNRTWARKNK CHHCEEEEEECHHCCEEEEEECCCCCCCEEEEEEECEEEEEEECCCCEEEEEEEECCCCC IILQLPMHVYVESLMGSDRYAALLYGPYVLAGRMGTENLPTTFWGKMNNTAMNKIDLNKI EEEEECHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCCCCCEEECCCC PVFRMPLKQIPAYVKSISTDTLKFKIDLKEFDNVVVEPFYKVHFERYAVYWPISY CEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCHHHCCHHHEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA