Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348317

Identifier: 29348317

GI number: 29348317

Start: 3642019

End: 3644565

Strand: Reverse

Name: 29348317

Synonym: BT_2908

Alternate gene names: NA

Gene position: 3644565-3642019 (Counterclockwise)

Preceding gene: 29348318

Following gene: 29348316

Centisome position: 58.22

GC content: 40.48

Gene sequence:

>2547_bases
ATGGAAAAGTTGAAGTATTCTCTTTTGTTTATGATTTCGATTCTGGCTATTTCCAATAGATGGGTGTCGGCAAATGACAT
CGATGACGAAAGGAACCGTATATACAATAGTTCTTATAGTGGGAAATATAATAATCGAATCGCTTTTCCTATAGGGGGAA
TTGGTACAGGTATGTATTGTCTGGAAGGAACAGGCTATATATCTCATATGTCAGTATGGCATCGACCGGAAGTTTTTCAT
GAACCGGGAATGTTTGCTGCTCTGTATGTGAAGGGGGTATGTAATGGGGCTAAGGTACTTGAAGGACCTGTATCTGATTG
GAGAAAATTTGGAATGCCCAATTACGGAACAGGAGGTAGTATGGGATCAATATTAGGACTTCCCCGTTTTGATACAGTCG
AATTTGAAGCACGTTTTCCGTTTGCCAAGGTTTCATTAACAGATAAAGATATTCCCGTTAAGGTAACCATTTTGGGGTGG
AGTCCTTTTATTCCGGGTGATCCGGATAATTCCAGTTTACCGGTAGGAGGATTGGAATATAGTTTAGAGAATACTAGTAA
AGAGGTTCAGGAAACTATTTTCTCCTACCATGCTCGTAACTTTCTGAGTTGGGGTAAAGGATTGGATGCTATAAAAACGA
TGCCTCATGGGTTTATCCTTTCACAGTCAGGTACAGAAACGGAGCCTCATTTGCAGGGTGATTTTGCTATCTTTACGGAT
CAGGATTCTTTAAAGATTAATTATTGTTGGTTTCGTGGAGGATGGTTTGATAGTCTTACGATGGTCTGGAACGCTATTGA
GGCAGGTTTAATGCCACAATGTCCAGCAATAGAGAAAGGTGCACCAGGAGCTTCTATGTTTGTCCCGGTAACATTGATGC
CAGGGGAAAAGAAAACAATCAGGATTTATACGGCATGGTATGTTCCTAACTCGACTTTGAGGCTTGGAGAGGAACCGGAA
GACTGGAATGACAATAATGTTGACTCCGCAAGACTAGCTGTAGAAAAGGCAGATAAGGGTAATTATAAACCTTGGTATAG
TAGCCGCTTTACAGGAGTAAATGAGGTTATTGATTATTTTCTGTCTCATTATAAGATTTTGCGCAATCAGACAGAAAGGT
TCACAGACTCTTTTTATCGTTCTACCTTACCGCCTGAAGTGATTGAAGCTGTTTCTGCTAACTTAAGTATTTTAAAGTCT
CCAACGGTGATGCGGCAATATGACGGACGCTTATGGACTTGGGAGGGATGTGCCGATAATTGGGGATCGTGTCATGGCTC
ATGTACTCACGTCTGGAATTATGCACAGGCTATTCCACACTTATTTCCTTCTTTGGAACGTTCGTTAAGGCATACAGAAT
TTGAAGAAGGGCAAGATTTGAAAGGCCATCAAGTGTTTCGTGTCAATTTACCGATTCGTCCTACCCGGCACAATTTTCAC
TCAGCTGCTGACGGGCAATTGGGAGGTATAATGAAAGTATATCGTGAGTGGAGAATTTCAGGTGAAAATGAGTTCCTTAT
CTCTATGTATCCAAAAGTAAAAAAGAGTTTGGACTACTGTATCTCAACTTGGGATCCTCGTAGGGTAGGAAGTATTGAAG
AACCACACCATAATACTTATGATATTGAGTTCTGGGGGCCGGATGGTATGCATAATAGTTTCTATTATGGAGCTTTATCA
GCTTTCATTCGTATGAGTGAGTTTCTCGATAAAGACGTTACTGAATATAAGAAACTATTGAAAAAAGGACGAAAATTTAC
TGAAACAGGCTTGTTTAATGGTGAGTATTTTATCCAAAAGATAGAGTGGAGGGGATTGAATGCAAAAGATCCGACTGTTG
CACAAAGTTTCCATAGTTCTTATTCTCCCGAAGCGAAAGAAATACTGGAGAAGGAAGGTCCTAAGTATCAGTATGGGAAC
GGTTGTCTGTCTGATGGAGTTTTGGGGTCGTGGCTCTCCCGAATGTGTGGGATGGAAGAAACTCTGAATACAGAAAAAGT
GAAGAGCCATTTATTATCAGTACATCGATATAATTTTAAGAAAGATCTGACTGATCACGCCAATCCTCAACGTTCCCCTT
ACGCTTTAGGCAAAGAAGGAGGCTTATTATTAGGAAGTTGGCCTAAAGGGGGCAAGTTGTCATTACCTTTTGTCTATAGT
AATGAAGTCTGGACAGGAATAGAATATCAAGTAGCTTCACATTTGATGCTACAGGGAGAAGTAGAAAAAGGCCTTGAGAT
CGTACGTGCCTGTAGGCAACGTTATGATGGAAGCGTCCGTAACCCTTTTAATGAGTATGAGTGTGGACATTGGTACGGAC
GAGCGTTATCCAGTTATGGCTTACTTCAAGGATTGACAGGAGTCCGATATGATGCTGTAGATAAAACACTGTATATTAAT
TCAAAAATAGGAGACTTTATTAGCTTTATCAGTACGGAGTCTGGATTTGGTAATATAGAACTTCGTTCCGGAAAACCTTT
TGTAAAAGTAGTATCCGGTCATATAGAGGTTGACAGATTTGTCGTATCGGGGAAAGTAGTTGAATAA

Upstream 100 bases:

>100_bases
TGCGATTGGCATTGGACATAAAGTCTCTGAACTGAAGAAACTGGCATTTCTTCTGGATATTCCAATAATAGTAGTTGAAT
AATGCTTTAAAACTCTTTTT

Downstream 100 bases:

>100_bases
TCAACAATAAGATAATAACTAAATTTTTAAGTGATAACTAAATACTATAATATTATGGATAGAAGAACTTTTCTTAAATC
TGCGAGTATGAAAGGTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 848; Mature: 848

Protein sequence:

>848_residues
MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH
EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW
SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD
QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE
DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS
PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH
SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS
AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN
GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS
NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN
SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE

Sequences:

>Translated_848_residues
MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH
EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW
SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD
QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE
DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS
PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH
SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS
AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN
GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS
NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN
SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE
>Mature_848_residues
MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH
EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW
SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD
QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE
DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS
PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH
SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS
AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN
GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS
NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN
SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE

Specific function: Unknown

COG id: COG4354

COG function: function code G; Predicted bile acid beta-glucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96075; Mature: 96075

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYC
CCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEE
LEGTGYISHMSVWHRPEVFHEPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGS
EECCCCHHHHHHHCCCCHHCCCCCEEEHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCC
MGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGWSPFIPGDPDNSSLPVGGLEY
CHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
SLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD
EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEC
QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTI
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE
RIYTAWYVPNSTLRLGEEPEDWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYF
EEEEEEECCCCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKSPTVMRQYDGRLWTWEGCADN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHCCCEEEECCCCCC
WGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTY
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCHHCCCCCCCCCCEE
DIEFWGPDGMHNSFYYGALSAFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQK
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEE
IEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGNGCLSDGVLGSWLSRMCGMEE
EEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHH
TLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS
HCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC
NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYG
CCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LLQGLTGVRYDAVDKTLYINSKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRF
HHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEE
VVSGKVVE
EECCEECC
>Mature Secondary Structure
MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYC
CCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEE
LEGTGYISHMSVWHRPEVFHEPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGS
EECCCCHHHHHHHCCCCHHCCCCCEEEHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCC
MGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGWSPFIPGDPDNSSLPVGGLEY
CHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
SLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD
EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEC
QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTI
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE
RIYTAWYVPNSTLRLGEEPEDWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYF
EEEEEEECCCCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKSPTVMRQYDGRLWTWEGCADN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHCCCEEEECCCCCC
WGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTY
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCHHCCCCCCCCCCEE
DIEFWGPDGMHNSFYYGALSAFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQK
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEE
IEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGNGCLSDGVLGSWLSRMCGMEE
EEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHH
TLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS
HCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC
NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYG
CCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LLQGLTGVRYDAVDKTLYINSKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRF
HHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEE
VVSGKVVE
EECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA