Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348302

Identifier: 29348302

GI number: 29348302

Start: 3613724

End: 3615598

Strand: Reverse

Name: 29348302

Synonym: BT_2893

Alternate gene names: NA

Gene position: 3615598-3613724 (Counterclockwise)

Preceding gene: 29348303

Following gene: 29348301

Centisome position: 57.75

GC content: 41.01

Gene sequence:

>1875_bases
ATGAAAATATCGAAAATGAAAATAAAGGTGGCAGGACTATGTTTGCTGACATGGGCATTTGTATCGACTTCATGTAGTGA
TTATCTGGATAAAACTCCGGACGATGCTACTTCCATAACCTTAGAGGAAGTGTTTTCCAGTGAAATTTATACAGAACGTT
TTCTGTTAAGAGCTTACGATTACCTTCCTTGTGAAACTAACTATAATGATAATGATTATTGGGCATTGGGTGCCTGGAGT
GGTGCATCTGATGAGATGAACATCACTTGGACTTATCCGATGGCTAAAGAAATGAATCGTGGTAGCTGGAATCCTAAAAT
GCTCGAAGGTAGTTCCAGTCAGGGTACGTCTTATGCAATGTGGTGGCGTTATTATGAAGGTATCCGTCAATGTAATGTGT
TTCTTGAAAATATAGACTTATGTCCGGCAGCGCAAGCTACAAAAAATGTGTGGATATGTGAAGCACGTTTTATGCGCGCA
ATGTTGCATTTCTTTCTGTTGCGTAGTCACGGTCCTATTCCTATCATGGATCATGCGCTGAAAATGGATGATGAAATGAC
ATATTTCCCTCGAAATACGTTTGATCAATGCGTAGATTTTATAGTTTCAGATTGTCAATATGGCATTGATGGAGCGTTGC
CGATGATTTATACCAATGCGAGTGGTACGGTGGCCGAATCTTTGTATGGGCGTGCTACAAAAGCCGCAGCTTATGCTTTG
AAAGCACGTGTATTGCTTTATGCTGCAAGTCCGCTGTTCAATGGAAATGCTGATTATGCTAAATTTGCCAATGAAGACGG
TACATTGCTCTTTGCTCCCAAAGATGATTCTAAATGGGGAAAAGCTGCTGCGGCTGCCAAAGAAGCAATAGATAAGATAG
AGGGTTCTTCTTATTATGGTTTGTATTATTCGGATGAACCTGATAACGGTTATAGAAACTATATGGAGTTATTCCTACCT
TCAAAAAAATGGAATAAAGAATATATCTTTGCCAGAAATCAAGGGACAGGCTATAGTGACAATATCCATCAGGAGAAATG
TATGGCAGCCAACGGTATGGGAGGCTGGAGCGGTCTTTGTCCTACTCAGGAACTGGTTGATGCCTATGAAATGGCTAATG
GTTCAACACCGATTATCGGATATAATGCAGATGGAACGCCTATAATAAATGGAGCAAGCGGCTACTCGGAAACTGGTTTT
GCGGCAACGGCTGGCAAACATTATCCGGCAGGAGTTTATAATATGTATGTCGGTCGTGAACCTCGTTTTTATGCTTCAAT
CAATTTTAATGGTCAACAGTGGCGTGGTCGCCAATTGGAATTTTGGCAAGGTGGAAAAGATGGTATTAATGTCTCCAAAG
TAGATTATTGCTGTACCGGATACTTATTGCGAAAAACTGCTGATGAAGGTGTAGATGTGATTAATGGTAAGGGAGGAATG
AAAGAAGCCTCTATCCTTTTCCGGGTAGGTAGTCTTTATCTGGATTATGCGGAAGCATTGAATGAAGCTGAAGGGCCTGT
AGATGATGTATACAAGTATGTAGACGCTATTCGTAAACGCGCCGGTTTGCCGGGATTGGCAAAAGGCTTGGACAAAGATA
AGATGCGTGAACGTATTCAGCATGAACGTCAGATAGAATTAGCGTTCGAAGCCGGACATCGCTATTTCGATTGTCACCGC
TGGAAAATTGCAGAGAAAACAGACAACGGATATATGCATGGTATGAATATAACTGCTACTAATAAGGTAGATTATAGTAA
ACGTTCAACAGTAGGTGATTCTCGTGTATTCGAAAAGAAACATTATCTGTTCCCTATACCGCAGAGTGAAATGGATAAGC
GGATAGGATTGGTACAATCTCCCTATTGGGAATAA

Upstream 100 bases:

>100_bases
TCAAGATTGTAGACCCGGAGTCGAATAATGGTGTAGGTAACTATCCGATGCAACGAACTATTAACTTTGGTTTCCAGATT
AACTTTAAATAAATATGAAT

Downstream 100 bases:

>100_bases
ATAAAACTGTATTTCCTCCCTAGGTATTTATCTGTTTAGGGAGGAAAATTTGTTATATATAAAACTGTTGATATATCATG
AAAACAAAAACAAGGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MKISKMKIKVAGLCLLTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYDYLPCETNYNDNDYWALGAWS
GASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAMWWRYYEGIRQCNVFLENIDLCPAAQATKNVWICEARFMRA
MLHFFLLRSHGPIPIMDHALKMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAYAL
KARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSYYGLYYSDEPDNGYRNYMELFLP
SKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWSGLCPTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGF
AATAGKHYPAGVYNMYVGREPRFYASINFNGQQWRGRQLEFWQGGKDGINVSKVDYCCTGYLLRKTADEGVDVINGKGGM
KEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGLPGLAKGLDKDKMRERIQHERQIELAFEAGHRYFDCHR
WKIAEKTDNGYMHGMNITATNKVDYSKRSTVGDSRVFEKKHYLFPIPQSEMDKRIGLVQSPYWE

Sequences:

>Translated_624_residues
MKISKMKIKVAGLCLLTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYDYLPCETNYNDNDYWALGAWS
GASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAMWWRYYEGIRQCNVFLENIDLCPAAQATKNVWICEARFMRA
MLHFFLLRSHGPIPIMDHALKMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAYAL
KARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSYYGLYYSDEPDNGYRNYMELFLP
SKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWSGLCPTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGF
AATAGKHYPAGVYNMYVGREPRFYASINFNGQQWRGRQLEFWQGGKDGINVSKVDYCCTGYLLRKTADEGVDVINGKGGM
KEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGLPGLAKGLDKDKMRERIQHERQIELAFEAGHRYFDCHR
WKIAEKTDNGYMHGMNITATNKVDYSKRSTVGDSRVFEKKHYLFPIPQSEMDKRIGLVQSPYWE
>Mature_624_residues
MKISKMKIKVAGLCLLTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYDYLPCETNYNDNDYWALGAWS
GASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAMWWRYYEGIRQCNVFLENIDLCPAAQATKNVWICEARFMRA
MLHFFLLRSHGPIPIMDHALKMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAYAL
KARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSYYGLYYSDEPDNGYRNYMELFLP
SKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWSGLCPTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGF
AATAGKHYPAGVYNMYVGREPRFYASINFNGQQWRGRQLEFWQGGKDGINVSKVDYCCTGYLLRKTADEGVDVINGKGGM
KEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGLPGLAKGLDKDKMRERIQHERQIELAFEAGHRYFDCHR
WKIAEKTDNGYMHGMNITATNKVDYSKRSTVGDSRVFEKKHYLFPIPQSEMDKRIGLVQSPYWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70461; Mature: 70461

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKMKIKVAGLCLLTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYD
CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHH
YLPCETNYNDNDYWALGAWSGASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAM
CCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEECCCCCCCCCHHH
WWRYYEGIRQCNVFLENIDLCPAAQATKNVWICEARFMRAMLHFFLLRSHGPIPIMDHAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH
KMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAYAL
CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
KARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSYYG
HHEEEEEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
LYYSDEPDNGYRNYMELFLPSKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWSGLC
EEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC
PTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGFAATAGKHYPAGVYNMYVGRE
CHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCEECCCCCCCCCCEEEEECCC
PRFYASINFNGQQWRGRQLEFWQGGKDGINVSKVDYCCTGYLLRKTADEGVDVINGKGGM
CCEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCC
KEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGLPGLAKGLDKDKMRERIQ
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH
HERQIELAFEAGHRYFDCHRWKIAEKTDNGYMHGMNITATNKVDYSKRSTVGDSRVFEKK
HHHEEEEEEECCCCEEEEEEEEEEEECCCCEEECEEEEECCCCCCCHHCCCCCHHHHCCC
HYLFPIPQSEMDKRIGLVQSPYWE
CCEECCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKISKMKIKVAGLCLLTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYD
CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHH
YLPCETNYNDNDYWALGAWSGASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAM
CCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEECCCCCCCCCHHH
WWRYYEGIRQCNVFLENIDLCPAAQATKNVWICEARFMRAMLHFFLLRSHGPIPIMDHAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH
KMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAYAL
CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
KARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSYYG
HHEEEEEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
LYYSDEPDNGYRNYMELFLPSKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWSGLC
EEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC
PTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGFAATAGKHYPAGVYNMYVGRE
CHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCEECCCCCCCCCCEEEEECCC
PRFYASINFNGQQWRGRQLEFWQGGKDGINVSKVDYCCTGYLLRKTADEGVDVINGKGGM
CCEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCC
KEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGLPGLAKGLDKDKMRERIQ
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH
HERQIELAFEAGHRYFDCHRWKIAEKTDNGYMHGMNITATNKVDYSKRSTVGDSRVFEKK
HHHEEEEEEECCCCEEEEEEEEEEEECCCCEEECEEEEECCCCCCCHHCCCCCHHHHCCC
HYLFPIPQSEMDKRIGLVQSPYWE
CCEECCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA