Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348301

Identifier: 29348301

GI number: 29348301

Start: 3611934

End: 3613646

Strand: Reverse

Name: 29348301

Synonym: BT_2892

Alternate gene names: NA

Gene position: 3613646-3611934 (Counterclockwise)

Preceding gene: 29348302

Following gene: 29348299

Centisome position: 57.72

GC content: 42.27

Gene sequence:

>1713_bases
ATGAAAACAAAAACAAGGCGTTTATTGAGCCTCTTGAATTTTTGTGTTCTTACACTTCTGGCCTGTGGAAACTCTGATGG
TGCCGGAGAAGATCCAGGAGTCCCTTATTTAGCTAAAAAAGGAGAACCTGTTGACGGTGTTCGTATTGGTTGGGATTATG
GAACAATCCGGCAACTGGCAACTAGGGGAGGATATCCACGTTCCATCCGTTTACAGGATAATACAGTGGTGGCTGTATAT
GAGAACTATGATACAGGCTATGAAATGCGCTGTAGTACAGATGAAGGTAGTACATGGGGGGATCCTGTTATTCTTTTCCC
CATCCATAGTATAACGAATGATAAAGGAACTGCCCGAATAAATATCGCTAACTCAGAAATTATACAACTTGCTAATGGGG
ATTTGCTGGCTGCTTGTAATTATCGTCCTCAAACACCCGAAATAACTCCGTTTGCTATAGCGGTACGCCGTAGTACTGAT
AATGGAGTAACGTGGAGCGATCCTCAGATTATTTATGAAGCGGAACCTCGTTTTTCTGACGGTTGTTGGGAACCGTCTTT
TCTTCAACTTCCTAATGAAGAGGTGCAAGTTTATTTTGCTAATGAGGGGCCATATACTCATTCTAATGAACAGGAAATAT
CCATGATGACCTCAGTGGATAATGGTAAGACATGGGGAGGGTATAAGACAGTTTGTTTTCGCGCAGGTAGTCGTGATGGA
ATGCCGGTAAGTAAGGTGGTTGGCGATGAAATCGTTTGTGTGATAGAAGATTGTGGGTTTGTTACTTTCAAACCATACAC
CGTACGTACTAAATTGTCGGATAATTGGTCGTCTCCTGTATTGGCGGATTCTCCAAATCGTGCTATGGCATTGGGCGAAC
CTGTAGAAGATTGGATTTACATGGGAGCTCCTTATTTAGGTGTACTTCCTACAGGAGAAACGTTACTTTCTTATCAGGTG
GATGATATACGTCACGACGATCAGTTGGGTGACAGGCTGCCTTATAGTACCATGGAAGTGGCAATAGGTGACAAGAATGC
CCGTAACTTTGTAAGGCGCACGCGCCCTTTTCCTGTGCCTGCGGGAAAGCATGCAGTATGGCCTTCTGTAGCTGTTTGGG
ATGCGAATACTATAGCAGCTCTTGCTACCAGTAACTATCAGGGGGGGACGGAGGCTCCGTTTTTCATGAAAGGACATGTA
ATGCGGGATTTAGAAGTGAACTCTTCTGATATTGTAAACTATCCTATTTTTATTGGTCATACCGGAATCTGTAATTTACG
TTTAGGAGTCGGGAAAGATGCAGATAATCTTTATATCACCTGCAAGGTTAAGGATGGAGAACTGTATTCCGGTGGACAAG
GAACTCAAAAAGGAAGCGGTGTTTTTATCTATCTTGATACAAAGAATGAATGTTTGAAAGAACCTGCTGAAGGTGTTTAT
AAGGTATGGTGTTCATATAAAGGCGATATAACTGTCTGGCAAGGTAATAAGGGGAAATGGGAGAATAGTGAGTTGGAAGG
ATTACAAATCACTCCTTCTGTTGTGTCGGGAGGTTATGAACTTGCTTTTACCATTCCTTTAAATCGTTCATTTAATAAAG
ATGCGATGAGGTTGTGTGCCACATTGTCTACAAAGACCTATACCGAAACATTAGTTCATAGTAATGCTGACAGGTCGTGT
ACATGGATGAAAATGAATTTAGGTGGGCATTAA

Upstream 100 bases:

>100_bases
TACAATCTCCCTATTGGGAATAAATAAAACTGTATTTCCTCCCTAGGTATTTATCTGTTTAGGGAGGAAAATTTGTTATA
TATAAAACTGTTGATATATC

Downstream 100 bases:

>100_bases
TGCAAAGAACGCATATTTGAAAACGCAGCAGGTACTTGACAAACGCTTTTAAATGTTGTATATTTGTAGATCAATAGCAT
AAACCTATAAAAAACAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MKTKTRRLLSLLNFCVLTLLACGNSDGAGEDPGVPYLAKKGEPVDGVRIGWDYGTIRQLATRGGYPRSIRLQDNTVVAVY
ENYDTGYEMRCSTDEGSTWGDPVILFPIHSITNDKGTARINIANSEIIQLANGDLLAACNYRPQTPEITPFAIAVRRSTD
NGVTWSDPQIIYEAEPRFSDGCWEPSFLQLPNEEVQVYFANEGPYTHSNEQEISMMTSVDNGKTWGGYKTVCFRAGSRDG
MPVSKVVGDEIVCVIEDCGFVTFKPYTVRTKLSDNWSSPVLADSPNRAMALGEPVEDWIYMGAPYLGVLPTGETLLSYQV
DDIRHDDQLGDRLPYSTMEVAIGDKNARNFVRRTRPFPVPAGKHAVWPSVAVWDANTIAALATSNYQGGTEAPFFMKGHV
MRDLEVNSSDIVNYPIFIGHTGICNLRLGVGKDADNLYITCKVKDGELYSGGQGTQKGSGVFIYLDTKNECLKEPAEGVY
KVWCSYKGDITVWQGNKGKWENSELEGLQITPSVVSGGYELAFTIPLNRSFNKDAMRLCATLSTKTYTETLVHSNADRSC
TWMKMNLGGH

Sequences:

>Translated_570_residues
MKTKTRRLLSLLNFCVLTLLACGNSDGAGEDPGVPYLAKKGEPVDGVRIGWDYGTIRQLATRGGYPRSIRLQDNTVVAVY
ENYDTGYEMRCSTDEGSTWGDPVILFPIHSITNDKGTARINIANSEIIQLANGDLLAACNYRPQTPEITPFAIAVRRSTD
NGVTWSDPQIIYEAEPRFSDGCWEPSFLQLPNEEVQVYFANEGPYTHSNEQEISMMTSVDNGKTWGGYKTVCFRAGSRDG
MPVSKVVGDEIVCVIEDCGFVTFKPYTVRTKLSDNWSSPVLADSPNRAMALGEPVEDWIYMGAPYLGVLPTGETLLSYQV
DDIRHDDQLGDRLPYSTMEVAIGDKNARNFVRRTRPFPVPAGKHAVWPSVAVWDANTIAALATSNYQGGTEAPFFMKGHV
MRDLEVNSSDIVNYPIFIGHTGICNLRLGVGKDADNLYITCKVKDGELYSGGQGTQKGSGVFIYLDTKNECLKEPAEGVY
KVWCSYKGDITVWQGNKGKWENSELEGLQITPSVVSGGYELAFTIPLNRSFNKDAMRLCATLSTKTYTETLVHSNADRSC
TWMKMNLGGH
>Mature_570_residues
MKTKTRRLLSLLNFCVLTLLACGNSDGAGEDPGVPYLAKKGEPVDGVRIGWDYGTIRQLATRGGYPRSIRLQDNTVVAVY
ENYDTGYEMRCSTDEGSTWGDPVILFPIHSITNDKGTARINIANSEIIQLANGDLLAACNYRPQTPEITPFAIAVRRSTD
NGVTWSDPQIIYEAEPRFSDGCWEPSFLQLPNEEVQVYFANEGPYTHSNEQEISMMTSVDNGKTWGGYKTVCFRAGSRDG
MPVSKVVGDEIVCVIEDCGFVTFKPYTVRTKLSDNWSSPVLADSPNRAMALGEPVEDWIYMGAPYLGVLPTGETLLSYQV
DDIRHDDQLGDRLPYSTMEVAIGDKNARNFVRRTRPFPVPAGKHAVWPSVAVWDANTIAALATSNYQGGTEAPFFMKGHV
MRDLEVNSSDIVNYPIFIGHTGICNLRLGVGKDADNLYITCKVKDGELYSGGQGTQKGSGVFIYLDTKNECLKEPAEGVY
KVWCSYKGDITVWQGNKGKWENSELEGLQITPSVVSGGYELAFTIPLNRSFNKDAMRLCATLSTKTYTETLVHSNADRSC
TWMKMNLGGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62965; Mature: 62965

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKTRRLLSLLNFCVLTLLACGNSDGAGEDPGVPYLAKKGEPVDGVRIGWDYGTIRQLA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHHHH
TRGGYPRSIRLQDNTVVAVYENYDTGYEMRCSTDEGSTWGDPVILFPIHSITNDKGTARI
HCCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCEEEE
NIANSEIIQLANGDLLAACNYRPQTPEITPFAIAVRRSTDNGVTWSDPQIIYEAEPRFSD
EECCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEECCCEEEEECCCCCCC
GCWEPSFLQLPNEEVQVYFANEGPYTHSNEQEISMMTSVDNGKTWGGYKTVCFRAGSRDG
CCCCCHHEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCC
MPVSKVVGDEIVCVIEDCGFVTFKPYTVRTKLSDNWSSPVLADSPNRAMALGEPVEDWIY
CCHHHHCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCEEECCCCCEEECCCCHHHHEE
MGAPYLGVLPTGETLLSYQVDDIRHDDQLGDRLPYSTMEVAIGDKNARNFVRRTRPFPVP
CCCCEEEEECCCCEEEEEEHHHCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
AGKHAVWPSVAVWDANTIAALATSNYQGGTEAPFFMKGHVMRDLEVNSSDIVNYPIFIGH
CCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCEEEEEECCCCCEEECCEEEEC
TGICNLRLGVGKDADNLYITCKVKDGELYSGGQGTQKGSGVFIYLDTKNECLKEPAEGVY
CCEEEEEEECCCCCCCEEEEEEEECCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHCEE
KVWCSYKGDITVWQGNKGKWENSELEGLQITPSVVSGGYELAFTIPLNRSFNKDAMRLCA
EEEEECCCCEEEEECCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEECCCCCCHHHHHHHH
TLSTKTYTETLVHSNADRSCTWMKMNLGGH
HHCCCHHHHHHHHCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKTKTRRLLSLLNFCVLTLLACGNSDGAGEDPGVPYLAKKGEPVDGVRIGWDYGTIRQLA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHHHH
TRGGYPRSIRLQDNTVVAVYENYDTGYEMRCSTDEGSTWGDPVILFPIHSITNDKGTARI
HCCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCEEEE
NIANSEIIQLANGDLLAACNYRPQTPEITPFAIAVRRSTDNGVTWSDPQIIYEAEPRFSD
EECCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEECCCEEEEECCCCCCC
GCWEPSFLQLPNEEVQVYFANEGPYTHSNEQEISMMTSVDNGKTWGGYKTVCFRAGSRDG
CCCCCHHEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCC
MPVSKVVGDEIVCVIEDCGFVTFKPYTVRTKLSDNWSSPVLADSPNRAMALGEPVEDWIY
CCHHHHCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCEEECCCCCEEECCCCHHHHEE
MGAPYLGVLPTGETLLSYQVDDIRHDDQLGDRLPYSTMEVAIGDKNARNFVRRTRPFPVP
CCCCEEEEECCCCEEEEEEHHHCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
AGKHAVWPSVAVWDANTIAALATSNYQGGTEAPFFMKGHVMRDLEVNSSDIVNYPIFIGH
CCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCEEEEEECCCCCEEECCEEEEC
TGICNLRLGVGKDADNLYITCKVKDGELYSGGQGTQKGSGVFIYLDTKNECLKEPAEGVY
CCEEEEEEECCCCCCCEEEEEEEECCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHCEE
KVWCSYKGDITVWQGNKGKWENSELEGLQITPSVVSGGYELAFTIPLNRSFNKDAMRLCA
EEEEECCCCEEEEECCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEECCCCCCHHHHHHHH
TLSTKTYTETLVHSNADRSCTWMKMNLGGH
HHCCCHHHHHHHHCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA