| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348279
Identifier: 29348279
GI number: 29348279
Start: 3590900
End: 3591766
Strand: Reverse
Name: 29348279
Synonym: BT_2870
Alternate gene names: NA
Gene position: 3591766-3590900 (Counterclockwise)
Preceding gene: 29348280
Following gene: 29348278
Centisome position: 57.37
GC content: 38.41
Gene sequence:
>867_bases ATGAAACATGCCTATTTGATTATAGCTCATAATGAGTTTGAAATTCTGAAACGACTGATACAGGCTCTTGATGATGAACG AAATGATATCTATATCCATTTTGACCGAAAGCTGAATCACTATCCGGATTGCCGGACATCGTATGCTAAACTTACTTTTT TAGAGGAACGTATGGATGTCCGTTGGGGAGATATAAGTGTAGTAGATGCAGAATTTGCATTGTTCGATGAAGCTTATCGA CGTGGGGAATATAGTTATTATCATTTGTTATCGGGTGTTGATATGCCTCTTAAAACACAGAACTATATTCATCGTTTTTT TGAAAAAAATGCGGGAAAAGAGTTTGTTGGCTACTATCAGGGAAATATATCCAAAGAAATTGACCGTAAAGTTTGTAGAT GGCATTTGTTCCCCAAAAGTTTTAAGGAAACTGAAGGCGGCTTGGCTGTAACAAAGCGTGTTTTACGTGCAGGATGTGTC CGGCTGCAGTCTTTACTCGGGATTCGGCGGAATAAGGATATTAATTTCAGAAAAGGTACTCAATGGCTAAGTATTAGTAA CGAGCTTGTTGGTTATTTGTTGCAGCAGCAAAAAGAGGTACGAAGAGTTTATACCCATACTTTTTGTGCGGACGAAATAT TTGTGCAGACTATTTGCTGGAATTCTTCTTTTCGCGACAGAGTCTACGATATGCACGATGAAGGACACGGTTGTTTGCGG ATGATTGGGTGGAAAGATAACCAGCTGGAAGAGTGGAAAGAAAAAGACTTTGAAATATTGATGAATTCGGAAGCATTGTT TGCCCGGAAATTTAGTATACGGCATATCGAAGTTGTTGATCAAATTCTGAATGAAATCAGTAAATGA
Upstream 100 bases:
>100_bases AATTAATCAGTTCGGGTTGTCTGTTTGCTCGGAAGTTTAGCTATACGGATATGCATATTGTTGACAAAATATTGATTCAT ATCACCGCTGATCAAGAATA
Downstream 100 bases:
>100_bases AAGAAAACCTTGAGAAAAGACAATCGGAAGTGATTGCAGCTATGAGATTTCCGTTGATGGTATTGTTGCTTTTTGCCCAT GTGCTTCCCATGACATCAAT
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycoside Transferase Family; Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase; D-Alpha Beta-D-Heptose-1 7-Biphosphate Phosphatase GmhB; Glycosyl Transferase Family Protein; Epsiib Glycosyltransferase; Glycoside Transferase Family Protein; Exopolysaccharide Gene Claster Protein
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKHAYLIIAHNEFEILKRLIQALDDERNDIYIHFDRKLNHYPDCRTSYAKLTFLEERMDVRWGDISVVDAEFALFDEAYR RGEYSYYHLLSGVDMPLKTQNYIHRFFEKNAGKEFVGYYQGNISKEIDRKVCRWHLFPKSFKETEGGLAVTKRVLRAGCV RLQSLLGIRRNKDINFRKGTQWLSISNELVGYLLQQQKEVRRVYTHTFCADEIFVQTICWNSSFRDRVYDMHDEGHGCLR MIGWKDNQLEEWKEKDFEILMNSEALFARKFSIRHIEVVDQILNEISK
Sequences:
>Translated_288_residues MKHAYLIIAHNEFEILKRLIQALDDERNDIYIHFDRKLNHYPDCRTSYAKLTFLEERMDVRWGDISVVDAEFALFDEAYR RGEYSYYHLLSGVDMPLKTQNYIHRFFEKNAGKEFVGYYQGNISKEIDRKVCRWHLFPKSFKETEGGLAVTKRVLRAGCV RLQSLLGIRRNKDINFRKGTQWLSISNELVGYLLQQQKEVRRVYTHTFCADEIFVQTICWNSSFRDRVYDMHDEGHGCLR MIGWKDNQLEEWKEKDFEILMNSEALFARKFSIRHIEVVDQILNEISK >Mature_288_residues MKHAYLIIAHNEFEILKRLIQALDDERNDIYIHFDRKLNHYPDCRTSYAKLTFLEERMDVRWGDISVVDAEFALFDEAYR RGEYSYYHLLSGVDMPLKTQNYIHRFFEKNAGKEFVGYYQGNISKEIDRKVCRWHLFPKSFKETEGGLAVTKRVLRAGCV RLQSLLGIRRNKDINFRKGTQWLSISNELVGYLLQQQKEVRRVYTHTFCADEIFVQTICWNSSFRDRVYDMHDEGHGCLR MIGWKDNQLEEWKEKDFEILMNSEALFARKFSIRHIEVVDQILNEISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34432; Mature: 34432
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAYLIIAHNEFEILKRLIQALDDERNDIYIHFDRKLNHYPDCRTSYAKLTFLEERMDV CCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC RWGDISVVDAEFALFDEAYRRGEYSYYHLLSGVDMPLKTQNYIHRFFEKNAGKEFVGYYQ CCCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHC GNISKEIDRKVCRWHLFPKSFKETEGGLAVTKRVLRAGCVRLQSLLGIRRNKDINFRKGT CCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QWLSISNELVGYLLQQQKEVRRVYTHTFCADEIFVQTICWNSSFRDRVYDMHDEGHGCLR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEE MIGWKDNQLEEWKEKDFEILMNSEALFARKFSIRHIEVVDQILNEISK EECCCCCHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHAYLIIAHNEFEILKRLIQALDDERNDIYIHFDRKLNHYPDCRTSYAKLTFLEERMDV CCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC RWGDISVVDAEFALFDEAYRRGEYSYYHLLSGVDMPLKTQNYIHRFFEKNAGKEFVGYYQ CCCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHC GNISKEIDRKVCRWHLFPKSFKETEGGLAVTKRVLRAGCVRLQSLLGIRRNKDINFRKGT CCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QWLSISNELVGYLLQQQKEVRRVYTHTFCADEIFVQTICWNSSFRDRVYDMHDEGHGCLR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEE MIGWKDNQLEEWKEKDFEILMNSEALFARKFSIRHIEVVDQILNEISK EECCCCCHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA