| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348278
Identifier: 29348278
GI number: 29348278
Start: 3589800
End: 3590903
Strand: Reverse
Name: 29348278
Synonym: BT_2869
Alternate gene names: NA
Gene position: 3590903-3589800 (Counterclockwise)
Preceding gene: 29348279
Following gene: 29348277
Centisome position: 57.36
GC content: 34.87
Gene sequence:
>1104_bases ATGAAAGAAAACCTTGAGAAAAGACAATCGGAAGTGATTGCAGCTATGAGATTTCCGTTGATGGTATTGTTGCTTTTTGC CCATGTGCTTCCCATGACATCAATCCCTATAGAGATGAATTTCTCAGAAATGAATGTATATCATCTTTTTTCAGAAGGCA TATCTCATAATTTGTCCCGGATACGCAATCCTTTATTCTTTTTCTTCTCTGGTTTCTTCTTCTTTCGCAAACTAGAGAAA TGGAGTCTTGATTTTTATCATCTTCAATTAAAAAAGAGAGTAATAAGCCTTTTGCTTCCTTATTTATTATGGAATATACT TATGATATTGGCTGTCTATATAAAGAATTATGCGTTTATTTTTCTTTTTTCAATGGAACCGGGGGAGGAACTACAGGAAG TCAGGAATAATTCTTTGTATATGTTGTTTTGGCATACTCCTGTGAACTATCCTTTGTGGTTTTTGCGTGATTTGATTTGT ATGTCTGCGTTGTCTCCATTATTCTATGCTTTCTTCAAGTATCTGAAAATATATGGATTACTTATTCTGCTCGCTCTGTA TTTATCTGTTTGGGAAACAAATATTGCAGGACTGAGTATGACAGCTATTATGTTTTTCGGAGCAGGTTCCTATATGGGAA TTTATAAAAAGAATGTTCTGGCGTTTTGTTCGAAGTTCCGGTATGTGACAGCAATAATCACTCTCATGTTTTTATGTTGC GCTATCATTTGTAATGGGAGGGAGCTTCATGCGTATATTGTTAGAATATATATATTGTTTGGCATAATAACAGCTTTCAA TTTGATGGACTGGTTAATAGATAAGGAAAGTTGGAAGAATCTGTTTTGTAAATTATCGGCTACAGTCTTTTTTATTTATG CAGCCCACGAAATATACATCATTAACTGGACAAAGGGCTTCTTCTCCCGTACTTCTCTTGCAGACTCCGGAGGAGGATTA ATGCTTAGTTATTTACTAATACCTTTTATTACTTTAGGTGTTTGTCTCGGTCTCTATTATTTTTTGAATAGAATGGCCCC CAATATGCTTGCTTTGCTGGTTGGAGGACGAATGAAAACTCAAATTATAAGAAACAGCAAATGA
Upstream 100 bases:
>100_bases AAGACTTTGAAATATTGATGAATTCGGAAGCATTGTTTGCCCGGAAATTTAGTATACGGCATATCGAAGTTGTTGATCAA ATTCTGAATGAAATCAGTAA
Downstream 100 bases:
>100_bases ATATTGGAAATATAACTATTTCAGTGATCATTCCTGTATACAATGCGTCAGTAACTTTGCCTCATTGTCTGGAATCCTTG CATAAACAGACTTATAGAAA
Product: putative succinyltransferase involved in succinoglycan biosynthesis
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKENLEKRQSEVIAAMRFPLMVLLLFAHVLPMTSIPIEMNFSEMNVYHLFSEGISHNLSRIRNPLFFFFSGFFFFRKLEK WSLDFYHLQLKKRVISLLLPYLLWNILMILAVYIKNYAFIFLFSMEPGEELQEVRNNSLYMLFWHTPVNYPLWFLRDLIC MSALSPLFYAFFKYLKIYGLLILLALYLSVWETNIAGLSMTAIMFFGAGSYMGIYKKNVLAFCSKFRYVTAIITLMFLCC AIICNGRELHAYIVRIYILFGIITAFNLMDWLIDKESWKNLFCKLSATVFFIYAAHEIYIINWTKGFFSRTSLADSGGGL MLSYLLIPFITLGVCLGLYYFLNRMAPNMLALLVGGRMKTQIIRNSK
Sequences:
>Translated_367_residues MKENLEKRQSEVIAAMRFPLMVLLLFAHVLPMTSIPIEMNFSEMNVYHLFSEGISHNLSRIRNPLFFFFSGFFFFRKLEK WSLDFYHLQLKKRVISLLLPYLLWNILMILAVYIKNYAFIFLFSMEPGEELQEVRNNSLYMLFWHTPVNYPLWFLRDLIC MSALSPLFYAFFKYLKIYGLLILLALYLSVWETNIAGLSMTAIMFFGAGSYMGIYKKNVLAFCSKFRYVTAIITLMFLCC AIICNGRELHAYIVRIYILFGIITAFNLMDWLIDKESWKNLFCKLSATVFFIYAAHEIYIINWTKGFFSRTSLADSGGGL MLSYLLIPFITLGVCLGLYYFLNRMAPNMLALLVGGRMKTQIIRNSK >Mature_367_residues MKENLEKRQSEVIAAMRFPLMVLLLFAHVLPMTSIPIEMNFSEMNVYHLFSEGISHNLSRIRNPLFFFFSGFFFFRKLEK WSLDFYHLQLKKRVISLLLPYLLWNILMILAVYIKNYAFIFLFSMEPGEELQEVRNNSLYMLFWHTPVNYPLWFLRDLIC MSALSPLFYAFFKYLKIYGLLILLALYLSVWETNIAGLSMTAIMFFGAGSYMGIYKKNVLAFCSKFRYVTAIITLMFLCC AIICNGRELHAYIVRIYILFGIITAFNLMDWLIDKESWKNLFCKLSATVFFIYAAHEIYIINWTKGFFSRTSLADSGGGL MLSYLLIPFITLGVCLGLYYFLNRMAPNMLALLVGGRMKTQIIRNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42963; Mature: 42963
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENLEKRQSEVIAAMRFPLMVLLLFAHVLPMTSIPIEMNFSEMNVYHLFSEGISHNLSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHH IRNPLFFFFSGFFFFRKLEKWSLDFYHLQLKKRVISLLLPYLLWNILMILAVYIKNYAFI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE FLFSMEPGEELQEVRNNSLYMLFWHTPVNYPLWFLRDLICMSALSPLFYAFFKYLKIYGL EEEECCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILLALYLSVWETNIAGLSMTAIMFFGAGSYMGIYKKNVLAFCSKFRYVTAIITLMFLCC HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIICNGRELHAYIVRIYILFGIITAFNLMDWLIDKESWKNLFCKLSATVFFIYAAHEIYI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEEEEEE INWTKGFFSRTSLADSGGGLMLSYLLIPFITLGVCLGLYYFLNRMAPNMLALLVGGRMKT EEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QIIRNSK HHHCCCC >Mature Secondary Structure MKENLEKRQSEVIAAMRFPLMVLLLFAHVLPMTSIPIEMNFSEMNVYHLFSEGISHNLSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHH IRNPLFFFFSGFFFFRKLEKWSLDFYHLQLKKRVISLLLPYLLWNILMILAVYIKNYAFI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE FLFSMEPGEELQEVRNNSLYMLFWHTPVNYPLWFLRDLICMSALSPLFYAFFKYLKIYGL EEEECCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILLALYLSVWETNIAGLSMTAIMFFGAGSYMGIYKKNVLAFCSKFRYVTAIITLMFLCC HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIICNGRELHAYIVRIYILFGIITAFNLMDWLIDKESWKNLFCKLSATVFFIYAAHEIYI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEEEEEEE INWTKGFFSRTSLADSGGGLMLSYLLIPFITLGVCLGLYYFLNRMAPNMLALLVGGRMKT EEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QIIRNSK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA