| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348267
Identifier: 29348267
GI number: 29348267
Start: 3569259
End: 3571199
Strand: Reverse
Name: 29348267
Synonym: BT_2858
Alternate gene names: NA
Gene position: 3571199-3569259 (Counterclockwise)
Preceding gene: 29348268
Following gene: 29348266
Centisome position: 57.04
GC content: 45.9
Gene sequence:
>1941_bases ATGAAAAATAGAATGATATACCAAATGAAGAATAAGGTCAGAAACCTGACATACTTCCTTCTGTTGATTGGAGGAACAGC ATTGACACAATCCTGCAGCTATCTGGATGTAGTGCCCGATAAGATAGGAACGATTGATAACTCGTTTACAAACCGCAACG AGGCGGAAAAGTATCTGAATACTTGTTACTCATACATTCCGGGCAATGACAGCCCATACAATAATGTCGCTCTGATGGGT GCGGACGAACTCTGGAGTTATTACCCTCTTACTCCGTACAACGACTTTGGCCCTTGGAAGATTGCACTGGGACGTCAGAA TGTCAATGACCCTTTATGTAACATGTGGTATGTATATTACCGTGGCATCCGTGATTGCAACATCTTTCTGGAGAACGTAT CAGACATGAGCAAAGTAGGAGATTTGACTCCTTCCATGCGGAAGAGATGGCTTGCCGAAGTGAAATTTCTGAAAGCATAT TATCATTTCTGTCTGTTCAGAATGTACGGTCCTATCGTGATTGCTGATGACAATCTCCCGATTTCGGCTACTCCGGAAGA AGTGAGAAAGAAACGTGAGCCGGTAGATAAGGTAGTGCAGTACATTGTAGATTTGCTGGACGAATGTCTGGAAGATCTTC CGAGAGTGATTTCCAACAAAGGTAGTGAGTTGGGCCGTGTGACGCAGATCGCAAACCTGACTCTGAAAGCCAGACTGCTG GTAACAGCTGCCAGTCCGTTGTTCAATGGTAATAAGGATTATGCAAACTATGTGGATAAGGATGGAGAACATTTGTTTAA CTCCACCGAAGACCCGACTAAATGGGACACCGCCATTGCCGCGTGCGAAGCCGCCATTGAAGCCAGTCAGGACCCGGAAT TAGGATTAGAATTATACTCCTACAAAAGCAACCTGATCCTGTCGGATGAAACCAAATGCCAGCTTAGCATCCGCAACAGC GTAACGGAAAAGTGGAATACAGAACTGATCTGGGGACTTTCTTCACGTTCGGACGCACACTTGCAGAGTCTTTGTATGAC CCGTGTCGGAGCTTACCCCAACAATATGTGGGGAGGACAGGAAATGCTGAACCCTACAATGGAAGCTACGAATCTGTACT ACACAAAGAACGGTGTCCCAATGGACGAAGATAAAACATGGAATTATGCCGACCGTTTCAAAGTAAAGATGCACACCAAC GAGCAACCATACGAACTGGCATCTTATTATGAAACAATACAGATGAACTTTGACAGAGAACCTCGCTTCTATGCCAATAT CGGTTTTGACGGTTGCACCTGGTATCAGTATAACTGTCCATCAGACAGTGAAAAAGACATCTGGACAGCGAAGAACCGCG CCGGACAAGCACAGGGAAAACTGGGGACTAACAGCTATACAACCACCGGATACTGGACCAAAAAACTGGTCAGTGTCACT TATGAAGTTACCCAGAGTGGCTATACGACCGAAAGATTCCCTTGGCCGGAAATGCGCCTTACTGACTTATACTTACTCTA TGCCGAAGCGCTGAATGAGAAAGACGATGTCAACAACCGTGAACTGGCTATCAGCTACCTGGATCAGATCAGAGCACGTG CCGGTCTGAAAGGAATCAAGGAATCATGGGACACTTACTCCAAGTATCCCAACAGATACAAGACACAGGAAGGACTTCGT GAGATTATCCAGCGTGAGCGTGCTATCGAACTGATGTTCGAAGGCAGCCGTTTCTGGGATCTCCGTCGATGGAAGACAGC CAATAAGGTATTGAACGAGAAGATCCACGGATGGAACTTTGAAGGTGAAACTCCCGCAGAGTACTATTCTCAGAGAACCC TGTATACATTAAAGTTTATCGCTCCGCGTGATTATTTCTGGCCGATTCATCAGAATGACCTGGTAGTCAACCCGAAATTG GTTCAGAACCCCGGATGGTAA
Upstream 100 bases:
>100_bases AAACTATGGGACATCGAAATGGGAGGTTCCGGACTGGGATATCCTATTCAGAGAGTCATCAATCTGGGTGTACAAATTAA CTTCTAAAATCTAGGAAAGC
Downstream 100 bases:
>100_bases TGTATGTCTCATTTTAAAATCAGCAGAATATGATATCACGTAAATTTACAATATGGGCTTGCGGCTTGCTTTTCGTTTTC GGTAGTTGCGCAGAAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL VQNPGW
Sequences:
>Translated_646_residues MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL VQNPGW >Mature_646_residues MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL VQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75135; Mature: 75135
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLN CCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHCCCCCCCCCHHHHHHHHH TCYSYIPGNDSPYNNVALMGADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYY HHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAYYHFCLFRMYGPIVIADDNLP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC ISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEE VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYS EEECCCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE YKSNLILSDETKCQLSIRNSVTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQ ECCCEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCH EMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTNEQPYELASYYETIQMNFDRE HHHCCHHHHCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC PRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT CCEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIK HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ESWDTYSKYPNRYKTQEGLREIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNF HHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC EGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKLVQNPGW CCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLN CCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHCCCCCCCCCHHHHHHHHH TCYSYIPGNDSPYNNVALMGADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYY HHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAYYHFCLFRMYGPIVIADDNLP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC ISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEE VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYS EEECCCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE YKSNLILSDETKCQLSIRNSVTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQ ECCCEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCH EMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTNEQPYELASYYETIQMNFDRE HHHCCHHHHCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC PRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT CCEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIK HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ESWDTYSKYPNRYKTQEGLREIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNF HHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC EGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKLVQNPGW CCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA