Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348267

Identifier: 29348267

GI number: 29348267

Start: 3569259

End: 3571199

Strand: Reverse

Name: 29348267

Synonym: BT_2858

Alternate gene names: NA

Gene position: 3571199-3569259 (Counterclockwise)

Preceding gene: 29348268

Following gene: 29348266

Centisome position: 57.04

GC content: 45.9

Gene sequence:

>1941_bases
ATGAAAAATAGAATGATATACCAAATGAAGAATAAGGTCAGAAACCTGACATACTTCCTTCTGTTGATTGGAGGAACAGC
ATTGACACAATCCTGCAGCTATCTGGATGTAGTGCCCGATAAGATAGGAACGATTGATAACTCGTTTACAAACCGCAACG
AGGCGGAAAAGTATCTGAATACTTGTTACTCATACATTCCGGGCAATGACAGCCCATACAATAATGTCGCTCTGATGGGT
GCGGACGAACTCTGGAGTTATTACCCTCTTACTCCGTACAACGACTTTGGCCCTTGGAAGATTGCACTGGGACGTCAGAA
TGTCAATGACCCTTTATGTAACATGTGGTATGTATATTACCGTGGCATCCGTGATTGCAACATCTTTCTGGAGAACGTAT
CAGACATGAGCAAAGTAGGAGATTTGACTCCTTCCATGCGGAAGAGATGGCTTGCCGAAGTGAAATTTCTGAAAGCATAT
TATCATTTCTGTCTGTTCAGAATGTACGGTCCTATCGTGATTGCTGATGACAATCTCCCGATTTCGGCTACTCCGGAAGA
AGTGAGAAAGAAACGTGAGCCGGTAGATAAGGTAGTGCAGTACATTGTAGATTTGCTGGACGAATGTCTGGAAGATCTTC
CGAGAGTGATTTCCAACAAAGGTAGTGAGTTGGGCCGTGTGACGCAGATCGCAAACCTGACTCTGAAAGCCAGACTGCTG
GTAACAGCTGCCAGTCCGTTGTTCAATGGTAATAAGGATTATGCAAACTATGTGGATAAGGATGGAGAACATTTGTTTAA
CTCCACCGAAGACCCGACTAAATGGGACACCGCCATTGCCGCGTGCGAAGCCGCCATTGAAGCCAGTCAGGACCCGGAAT
TAGGATTAGAATTATACTCCTACAAAAGCAACCTGATCCTGTCGGATGAAACCAAATGCCAGCTTAGCATCCGCAACAGC
GTAACGGAAAAGTGGAATACAGAACTGATCTGGGGACTTTCTTCACGTTCGGACGCACACTTGCAGAGTCTTTGTATGAC
CCGTGTCGGAGCTTACCCCAACAATATGTGGGGAGGACAGGAAATGCTGAACCCTACAATGGAAGCTACGAATCTGTACT
ACACAAAGAACGGTGTCCCAATGGACGAAGATAAAACATGGAATTATGCCGACCGTTTCAAAGTAAAGATGCACACCAAC
GAGCAACCATACGAACTGGCATCTTATTATGAAACAATACAGATGAACTTTGACAGAGAACCTCGCTTCTATGCCAATAT
CGGTTTTGACGGTTGCACCTGGTATCAGTATAACTGTCCATCAGACAGTGAAAAAGACATCTGGACAGCGAAGAACCGCG
CCGGACAAGCACAGGGAAAACTGGGGACTAACAGCTATACAACCACCGGATACTGGACCAAAAAACTGGTCAGTGTCACT
TATGAAGTTACCCAGAGTGGCTATACGACCGAAAGATTCCCTTGGCCGGAAATGCGCCTTACTGACTTATACTTACTCTA
TGCCGAAGCGCTGAATGAGAAAGACGATGTCAACAACCGTGAACTGGCTATCAGCTACCTGGATCAGATCAGAGCACGTG
CCGGTCTGAAAGGAATCAAGGAATCATGGGACACTTACTCCAAGTATCCCAACAGATACAAGACACAGGAAGGACTTCGT
GAGATTATCCAGCGTGAGCGTGCTATCGAACTGATGTTCGAAGGCAGCCGTTTCTGGGATCTCCGTCGATGGAAGACAGC
CAATAAGGTATTGAACGAGAAGATCCACGGATGGAACTTTGAAGGTGAAACTCCCGCAGAGTACTATTCTCAGAGAACCC
TGTATACATTAAAGTTTATCGCTCCGCGTGATTATTTCTGGCCGATTCATCAGAATGACCTGGTAGTCAACCCGAAATTG
GTTCAGAACCCCGGATGGTAA

Upstream 100 bases:

>100_bases
AAACTATGGGACATCGAAATGGGAGGTTCCGGACTGGGATATCCTATTCAGAGAGTCATCAATCTGGGTGTACAAATTAA
CTTCTAAAATCTAGGAAAGC

Downstream 100 bases:

>100_bases
TGTATGTCTCATTTTAAAATCAGCAGAATATGATATCACGTAAATTTACAATATGGGCTTGCGGCTTGCTTTTCGTTTTC
GGTAGTTGCGCAGAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG
ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY
YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL
VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS
VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN
EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT
YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR
EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL
VQNPGW

Sequences:

>Translated_646_residues
MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG
ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY
YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL
VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS
VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN
EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT
YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR
EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL
VQNPGW
>Mature_646_residues
MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLNTCYSYIPGNDSPYNNVALMG
ADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYYRGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAY
YHFCLFRMYGPIVIADDNLPISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL
VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYSYKSNLILSDETKCQLSIRNS
VTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQEMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTN
EQPYELASYYETIQMNFDREPRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT
YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIKESWDTYSKYPNRYKTQEGLR
EIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNFEGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKL
VQNPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75135; Mature: 75135

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLN
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHCCCCCCCCCHHHHHHHHH
TCYSYIPGNDSPYNNVALMGADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYY
HHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
RGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAYYHFCLFRMYGPIVIADDNLP
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
ISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEE
VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYS
EEECCCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
YKSNLILSDETKCQLSIRNSVTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQ
ECCCEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCH
EMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTNEQPYELASYYETIQMNFDRE
HHHCCHHHHCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
PRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT
CCEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH
YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIK
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESWDTYSKYPNRYKTQEGLREIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
EGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKLVQNPGW
CCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKNRMIYQMKNKVRNLTYFLLLIGGTALTQSCSYLDVVPDKIGTIDNSFTNRNEAEKYLN
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHCCCCCCCCCHHHHHHHHH
TCYSYIPGNDSPYNNVALMGADELWSYYPLTPYNDFGPWKIALGRQNVNDPLCNMWYVYY
HHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
RGIRDCNIFLENVSDMSKVGDLTPSMRKRWLAEVKFLKAYYHFCLFRMYGPIVIADDNLP
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
ISATPEEVRKKREPVDKVVQYIVDLLDECLEDLPRVISNKGSELGRVTQIANLTLKARLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEE
VTAASPLFNGNKDYANYVDKDGEHLFNSTEDPTKWDTAIAACEAAIEASQDPELGLELYS
EEECCCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
YKSNLILSDETKCQLSIRNSVTEKWNTELIWGLSSRSDAHLQSLCMTRVGAYPNNMWGGQ
ECCCEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCH
EMLNPTMEATNLYYTKNGVPMDEDKTWNYADRFKVKMHTNEQPYELASYYETIQMNFDRE
HHHCCHHHHCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
PRFYANIGFDGCTWYQYNCPSDSEKDIWTAKNRAGQAQGKLGTNSYTTTGYWTKKLVSVT
CCEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH
YEVTQSGYTTERFPWPEMRLTDLYLLYAEALNEKDDVNNRELAISYLDQIRARAGLKGIK
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESWDTYSKYPNRYKTQEGLREIIQRERAIELMFEGSRFWDLRRWKTANKVLNEKIHGWNF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
EGETPAEYYSQRTLYTLKFIAPRDYFWPIHQNDLVVNPKLVQNPGW
CCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA