Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348266

Identifier: 29348266

GI number: 29348266

Start: 3568024

End: 3569229

Strand: Reverse

Name: 29348266

Synonym: BT_2857

Alternate gene names: NA

Gene position: 3569229-3568024 (Counterclockwise)

Preceding gene: 29348267

Following gene: 29348265

Centisome position: 57.01

GC content: 47.18

Gene sequence:

>1206_bases
ATGATATCACGTAAATTTACAATATGGGCTTGCGGCTTGCTTTTCGTTTTCGGTAGTTGCGCAGAAGATATGGTAAAGCC
CATTGAAAACGACAAAGACGCTCCTGGCACTGTTCAGGACGTAAAAACAGAAAGCCTTCCGGGAGCTGTGAAATTCACTT
ATACACTTCCTTCCGATCCGGATTTGCTGTATGTGTTGGCCAAGTATACTAATAAAACAGGGAAAGTCATGGAGTTCCGT
TCCTCGTTTTACACGAACTCTGTTACGGTAGAAGGTTTTGGCGATACGGATACTTATAAAGTAGAACTGTACACTGTAGA
CCGTAGCGAGAACCGTTCTCAGCCTCAGATAGTGGAAGTCGTTCCGCTGACTCCTCCTATCCTGTCCTGCTACGAGTCGT
TATCGATGGTTTCTGACTTTGGCGGCATGACCTTCGAGATGGACAATAAGTTCAAGTCCGATCTTGCTATCTACGTCTGT
ACGCCCGATGAATTAGGCGATATGGTGCTGGCCGAAACATTCTACTCGGCACGTGAAGAGATCGTTTATTCCGTCAGAGG
GTATGATGCAGTTCCCCGTCGTTTCGGCATCTTCCTGCAGGATAAATATGGGAATGAGACAGATACGCTGTTCACCGAGC
TGACTCCGATCTACGAAAGGGAATTGGATAAGACGAAGTTCAGGGAAATGTATTTGCAGAACGATTCCCGCGTAGATTCG
TACGATGGCAAGATGGAATATGTATGGAACGGAAGAATCTCCAAAGATGGTGACAGTGGTGGCGTAGGACTTCACACCGG
AACAGGCACGAAAGACGGTCCGGCAGTATTTACCTTCGACCTTGGCGTACTGGCTAAACTGAGCCGCTTTGCACTGTGGG
CTATTCAAGACGAGAAGCACTTCTATAACGACATGAGCCCGAGACGCTACGAAGTATGGGGATGCGCTACGGAACCTAAC
CCCGATGGTAGCTGGGATCAGTGGGTGAAACTATTGGATATGGAGAATGTGAAGCCTTCCGGTTCGCCTATCGGTATCCT
GACGGAAGATGATATCGAAGCCGCGAAAATAGGAGATCAGGCAAATGTTCCTCTGGATATGCCGCGTGTACGCTATATCC
GTATCAAATGTCTGAAGAATTGGTCTAACAATTACAACATCTGTTTCACGGAACTCACCTTCTGGGGGAATGATAACGAA
GAATAA

Upstream 100 bases:

>100_bases
ATTATTTCTGGCCGATTCATCAGAATGACCTGGTAGTCAACCCGAAATTGGTTCAGAACCCCGGATGGTAATGTATGTCT
CATTTTAAAATCAGCAGAAT

Downstream 100 bases:

>100_bases
TTCAATGAGTGTTAACCGACTGATTAAAGCAGAAAGAATATGAAACAATTTATCAAACATACGCCCTATCTGATGTCACT
ACTGATGCTGTTGGGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MISRKFTIWACGLLFVFGSCAEDMVKPIENDKDAPGTVQDVKTESLPGAVKFTYTLPSDPDLLYVLAKYTNKTGKVMEFR
SSFYTNSVTVEGFGDTDTYKVELYTVDRSENRSQPQIVEVVPLTPPILSCYESLSMVSDFGGMTFEMDNKFKSDLAIYVC
TPDELGDMVLAETFYSAREEIVYSVRGYDAVPRRFGIFLQDKYGNETDTLFTELTPIYERELDKTKFREMYLQNDSRVDS
YDGKMEYVWNGRISKDGDSGGVGLHTGTGTKDGPAVFTFDLGVLAKLSRFALWAIQDEKHFYNDMSPRRYEVWGCATEPN
PDGSWDQWVKLLDMENVKPSGSPIGILTEDDIEAAKIGDQANVPLDMPRVRYIRIKCLKNWSNNYNICFTELTFWGNDNE
E

Sequences:

>Translated_401_residues
MISRKFTIWACGLLFVFGSCAEDMVKPIENDKDAPGTVQDVKTESLPGAVKFTYTLPSDPDLLYVLAKYTNKTGKVMEFR
SSFYTNSVTVEGFGDTDTYKVELYTVDRSENRSQPQIVEVVPLTPPILSCYESLSMVSDFGGMTFEMDNKFKSDLAIYVC
TPDELGDMVLAETFYSAREEIVYSVRGYDAVPRRFGIFLQDKYGNETDTLFTELTPIYERELDKTKFREMYLQNDSRVDS
YDGKMEYVWNGRISKDGDSGGVGLHTGTGTKDGPAVFTFDLGVLAKLSRFALWAIQDEKHFYNDMSPRRYEVWGCATEPN
PDGSWDQWVKLLDMENVKPSGSPIGILTEDDIEAAKIGDQANVPLDMPRVRYIRIKCLKNWSNNYNICFTELTFWGNDNE
E
>Mature_401_residues
MISRKFTIWACGLLFVFGSCAEDMVKPIENDKDAPGTVQDVKTESLPGAVKFTYTLPSDPDLLYVLAKYTNKTGKVMEFR
SSFYTNSVTVEGFGDTDTYKVELYTVDRSENRSQPQIVEVVPLTPPILSCYESLSMVSDFGGMTFEMDNKFKSDLAIYVC
TPDELGDMVLAETFYSAREEIVYSVRGYDAVPRRFGIFLQDKYGNETDTLFTELTPIYERELDKTKFREMYLQNDSRVDS
YDGKMEYVWNGRISKDGDSGGVGLHTGTGTKDGPAVFTFDLGVLAKLSRFALWAIQDEKHFYNDMSPRRYEVWGCATEPN
PDGSWDQWVKLLDMENVKPSGSPIGILTEDDIEAAKIGDQANVPLDMPRVRYIRIKCLKNWSNNYNICFTELTFWGNDNE
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45579; Mature: 45579

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRKFTIWACGLLFVFGSCAEDMVKPIENDKDAPGTVQDVKTESLPGAVKFTYTLPSDP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCC
DLLYVLAKYTNKTGKVMEFRSSFYTNSVTVEGFGDTDTYKVELYTVDRSENRSQPQIVEV
CEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEE
VPLTPPILSCYESLSMVSDFGGMTFEMDNKFKSDLAIYVCTPDELGDMVLAETFYSAREE
ECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
IVYSVRGYDAVPRRFGIFLQDKYGNETDTLFTELTPIYERELDKTKFREMYLQNDSRVDS
EEEEECCCCCCCHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
YDGKMEYVWNGRISKDGDSGGVGLHTGTGTKDGPAVFTFDLGVLAKLSRFALWAIQDEKH
CCCEEEEEECCEECCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHEEEEEECCHH
FYNDMSPRRYEVWGCATEPNPDGSWDQWVKLLDMENVKPSGSPIGILTEDDIEAAKIGDQ
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCC
ANVPLDMPRVRYIRIKCLKNWSNNYNICFTELTFWGNDNEE
CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MISRKFTIWACGLLFVFGSCAEDMVKPIENDKDAPGTVQDVKTESLPGAVKFTYTLPSDP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCC
DLLYVLAKYTNKTGKVMEFRSSFYTNSVTVEGFGDTDTYKVELYTVDRSENRSQPQIVEV
CEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEE
VPLTPPILSCYESLSMVSDFGGMTFEMDNKFKSDLAIYVCTPDELGDMVLAETFYSAREE
ECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
IVYSVRGYDAVPRRFGIFLQDKYGNETDTLFTELTPIYERELDKTKFREMYLQNDSRVDS
EEEEECCCCCCCHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
YDGKMEYVWNGRISKDGDSGGVGLHTGTGTKDGPAVFTFDLGVLAKLSRFALWAIQDEKH
CCCEEEEEECCEECCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHEEEEEECCHH
FYNDMSPRRYEVWGCATEPNPDGSWDQWVKLLDMENVKPSGSPIGILTEDDIEAAKIGDQ
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCC
ANVPLDMPRVRYIRIKCLKNWSNNYNICFTELTFWGNDNEE
CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA