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The map label for this gene is aga [H]

Identifier: 29348260

GI number: 29348260

Start: 3557328

End: 3559493

Strand: Reverse

Name: aga [H]

Synonym: BT_2851

Alternate gene names: 29348260

Gene position: 3559493-3557328 (Counterclockwise)

Preceding gene: 29348261

Following gene: 29348251

Centisome position: 56.86

GC content: 45.8

Gene sequence:

>2166_bases
ATGTATATCATGAAAGTGAGAATCCTTTTTTTAATCTGTTTCCTTAGTATCACCTGTCTTCTGAACGCGGCGGACAAGCC
TGTCATTCAGATTCATACGGATAACAGTAGTCTGATCTTCCGCGTAGCCGACAACGGGCGGTTATACCAAAGCTATCTGG
GCAAAAAGCTGAACCATGAGGCCGATATTTCTCATCTTCCGCAAGGGACGGAAGCCTATATCACCCACGGTATGGAGGAT
TACTTTGAACCTGCCATTCATATCCTTCACAATGACGGTAATCCGTCACTTCTGTTGAAGTATGTCTCTCATGAGACGAA
AGCGGTGTCGCAAGGAGTTAACGAAACCATTATCACCCTGGGAGATGATAAATATCCGGTTACGGTAAAGCTGCATTACG
TCACTTATCCTGCCGAGGATATCATTAAAACCTATACGGAAATCAGCCATAAAGAGAAGAAGCCCGTAGTGCTTCACCAA
TATGCCTCTAGTATGCTTCATCTGAACCGTGCGAAGTATTATCTGACTGAATTTTCGGGCGACTGGGCTCACGAAGCTAA
TATCTCCGACCAGCCGTTGGAGTTTGGTAAAAAAGTGCTCGATACCAAACTGGGCGCCCGTGCCAACATGTTTACCCCTC
CGTTCTTCCAGCTTTCTTTGGACCAGCTGGCTACGGAGAATTGTGGTGAAGTGCTGGTAGGTACATTGGGATGGACCGGC
AATTTCCGCTTTACTTTCGAAGTGGACAACAAGAATGAATTGCGTATCATTTCGGGTATCAACCCTTATGCCTCTGAATA
TTATCTTCCGGCAGGTGTCGTGTTCCGTACCCCCGATTTCTATTTTACCTATAGTGCAAATGGTAAGGGCAAAGCCAGCC
GTAATTTCCACGATTGGGCACGCCGTTATCAGTTGAAGGACGGAGATGAAACCCGTATGACCCTGTTAAATAACTGGGAA
GCGACTTATTTCGATTTTAATGAGGAGAAACTGATAGGACTGATTGGCGATGCCGCAGGGCTCGGAGTGGATATGTTCTT
GCTGGACGACGGCTGGTTTGCCAATAAATATCCGCGCAGCAGCGATCATCAAGGCTTGGGAGACTGGGATGAAACGGCAG
ATAAACTGCCCAACGGTATCGGGCGTCTGGTCGAAGAAGCTACAAAGAAGGGTATCAAGTTCGGTCTGTGGATAGAACCG
GAAATGGTGAATCCGAAGAGTGAGCTTTATGAGAAACATAAAGACTGGGTCATCCATCTTCCCAATCGGGATGAATATTA
CTTCCGTAATCAGTTGGTACTTGACCTGAGCAATCCGAAAGTGCAGGACTTCGTATTTGGAGTAGTAGATGATTTGATGA
CTAAATATCCCGGTATTGCTTTCTTCAAATGGGATTGCAATAGCCCGATCACTAATATCTACTCTTCTTATCTGAAGGAG
AAGCAGTCGCACTTGTACATCGACTATGTTCGCGGTCTGTATAATGTACTGGAACGTATTAAAACGAAGTACCCTGATCT
GCCGATGATGCTTTGTTCGGGCGGTAGCGGGCGTATCGACTATGAAACGCTCAGATACTTCACTGAGTTCTGGCCGAGTG
ATAACACGGACCCTATCGAACGTCTGTTTATCCAATGGGGATACTCTCAGCTTTTCCCGGCAAAAACTCTTTGTGCACAT
GTCACTACATGGAATCATGATGCAAGTATCAAATTCCGTACAGACGTAGCAATGATGGGCAAACTTGGTTTTGATATCAA
ATTGTCGGACCTCAATGATAATGAGAAGAAGTTCTGCCGTGATGCGGTCACCAACTACAATCATCTTAAACCGGTAGTGC
TCGAAGGAGACATGTATCGGCTGGTATCTCCTTATAGCGGAAATCATACTTCCACACAATATGTGGGGAAAGATAAGAAG
GGAGCTGTTGTCTTTGCATTCGATATTTATTCCCGTTATGGCGAGAAACTGTTGCCTGTCCGTCTGCAAGGACTGGACGC
CGGTCGGCAGTACCGGGTGAAGGAAATCAATCTGATGCCGGGTACTAACTCTTCTCTGCAAGGAAACGGTGAGTTATTCT
CTGGTGAATATCTGATGACGGTAGGACTGAATATATTTACAGGTCAGCGTCTGAACAGCAGAGTTATAGAAGTAGTTGCT
GAATGA

Upstream 100 bases:

>100_bases
CAACTGGTTCACTTACGACTTTAACTGATTTAGTTCGTTCACAACTTTAATTGATTCAGCCATCCACAATTTTAACGACT
TGATTTATAAACCTTATTAA

Downstream 100 bases:

>100_bases
CAGGACCGATGGAAATCCGTTAATCACTTGACAAACGCCTTTTATTGTTGTATATTTGTAGTTCCAAACCTGAACTGAAT
AATATAAGAACGATAAATAA

Product: alpha-galactosidase

Products: NA

Alternate protein names: Melibiase [H]

Number of amino acids: Translated: 721; Mature: 721

Protein sequence:

>721_residues
MYIMKVRILFLICFLSITCLLNAADKPVIQIHTDNSSLIFRVADNGRLYQSYLGKKLNHEADISHLPQGTEAYITHGMED
YFEPAIHILHNDGNPSLLLKYVSHETKAVSQGVNETIITLGDDKYPVTVKLHYVTYPAEDIIKTYTEISHKEKKPVVLHQ
YASSMLHLNRAKYYLTEFSGDWAHEANISDQPLEFGKKVLDTKLGARANMFTPPFFQLSLDQLATENCGEVLVGTLGWTG
NFRFTFEVDNKNELRIISGINPYASEYYLPAGVVFRTPDFYFTYSANGKGKASRNFHDWARRYQLKDGDETRMTLLNNWE
ATYFDFNEEKLIGLIGDAAGLGVDMFLLDDGWFANKYPRSSDHQGLGDWDETADKLPNGIGRLVEEATKKGIKFGLWIEP
EMVNPKSELYEKHKDWVIHLPNRDEYYFRNQLVLDLSNPKVQDFVFGVVDDLMTKYPGIAFFKWDCNSPITNIYSSYLKE
KQSHLYIDYVRGLYNVLERIKTKYPDLPMMLCSGGSGRIDYETLRYFTEFWPSDNTDPIERLFIQWGYSQLFPAKTLCAH
VTTWNHDASIKFRTDVAMMGKLGFDIKLSDLNDNEKKFCRDAVTNYNHLKPVVLEGDMYRLVSPYSGNHTSTQYVGKDKK
GAVVFAFDIYSRYGEKLLPVRLQGLDAGRQYRVKEINLMPGTNSSLQGNGELFSGEYLMTVGLNIFTGQRLNSRVIEVVA
E

Sequences:

>Translated_721_residues
MYIMKVRILFLICFLSITCLLNAADKPVIQIHTDNSSLIFRVADNGRLYQSYLGKKLNHEADISHLPQGTEAYITHGMED
YFEPAIHILHNDGNPSLLLKYVSHETKAVSQGVNETIITLGDDKYPVTVKLHYVTYPAEDIIKTYTEISHKEKKPVVLHQ
YASSMLHLNRAKYYLTEFSGDWAHEANISDQPLEFGKKVLDTKLGARANMFTPPFFQLSLDQLATENCGEVLVGTLGWTG
NFRFTFEVDNKNELRIISGINPYASEYYLPAGVVFRTPDFYFTYSANGKGKASRNFHDWARRYQLKDGDETRMTLLNNWE
ATYFDFNEEKLIGLIGDAAGLGVDMFLLDDGWFANKYPRSSDHQGLGDWDETADKLPNGIGRLVEEATKKGIKFGLWIEP
EMVNPKSELYEKHKDWVIHLPNRDEYYFRNQLVLDLSNPKVQDFVFGVVDDLMTKYPGIAFFKWDCNSPITNIYSSYLKE
KQSHLYIDYVRGLYNVLERIKTKYPDLPMMLCSGGSGRIDYETLRYFTEFWPSDNTDPIERLFIQWGYSQLFPAKTLCAH
VTTWNHDASIKFRTDVAMMGKLGFDIKLSDLNDNEKKFCRDAVTNYNHLKPVVLEGDMYRLVSPYSGNHTSTQYVGKDKK
GAVVFAFDIYSRYGEKLLPVRLQGLDAGRQYRVKEINLMPGTNSSLQGNGELFSGEYLMTVGLNIFTGQRLNSRVIEVVA
E
>Mature_721_residues
MYIMKVRILFLICFLSITCLLNAADKPVIQIHTDNSSLIFRVADNGRLYQSYLGKKLNHEADISHLPQGTEAYITHGMED
YFEPAIHILHNDGNPSLLLKYVSHETKAVSQGVNETIITLGDDKYPVTVKLHYVTYPAEDIIKTYTEISHKEKKPVVLHQ
YASSMLHLNRAKYYLTEFSGDWAHEANISDQPLEFGKKVLDTKLGARANMFTPPFFQLSLDQLATENCGEVLVGTLGWTG
NFRFTFEVDNKNELRIISGINPYASEYYLPAGVVFRTPDFYFTYSANGKGKASRNFHDWARRYQLKDGDETRMTLLNNWE
ATYFDFNEEKLIGLIGDAAGLGVDMFLLDDGWFANKYPRSSDHQGLGDWDETADKLPNGIGRLVEEATKKGIKFGLWIEP
EMVNPKSELYEKHKDWVIHLPNRDEYYFRNQLVLDLSNPKVQDFVFGVVDDLMTKYPGIAFFKWDCNSPITNIYSSYLKE
KQSHLYIDYVRGLYNVLERIKTKYPDLPMMLCSGGSGRIDYETLRYFTEFWPSDNTDPIERLFIQWGYSQLFPAKTLCAH
VTTWNHDASIKFRTDVAMMGKLGFDIKLSDLNDNEKKFCRDAVTNYNHLKPVVLEGDMYRLVSPYSGNHTSTQYVGKDKK
GAVVFAFDIYSRYGEKLLPVRLQGLDAGRQYRVKEINLMPGTNSSLQGNGELFSGEYLMTVGLNIFTGQRLNSRVIEVVA
E

Specific function: Unknown

COG id: COG3345

COG function: function code G; Alpha-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 36 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002252
- InterPro:   IPR017853
- InterPro:   IPR000111 [H]

Pfam domain/function: PF02065 Melibiase [H]

EC number: =3.2.1.22 [H]

Molecular weight: Translated: 82625; Mature: 82625

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00512 ALPHA_GALACTOSIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIMKVRILFLICFLSITCLLNAADKPVIQIHTDNSSLIFRVADNGRLYQSYLGKKLNHE
CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCC
ADISHLPQGTEAYITHGMEDYFEPAIHILHNDGNPSLLLKYVSHETKAVSQGVNETIITL
CCHHHCCCCCHHHHHCCHHHHHCCEEEEEECCCCHHEEEEEHHHHHHHHHCCCCCEEEEE
GDDKYPVTVKLHYVTYPAEDIIKTYTEISHKEKKPVVLHQYASSMLHLNRAKYYLTEFSG
CCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCC
DWAHEANISDQPLEFGKKVLDTKLGARANMFTPPFFQLSLDQLATENCGEVLVGTLGWTG
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHCCCCCEEEEEECCCC
NFRFTFEVDNKNELRIISGINPYASEYYLPAGVVFRTPDFYFTYSANGKGKASRNFHDWA
CEEEEEEECCCCCEEEEECCCCHHHCEECCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
RRYQLKDGDETRMTLLNNWEATYFDFNEEKLIGLIGDAAGLGVDMFLLDDGWFANKYPRS
HHCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCC
SDHQGLGDWDETADKLPNGIGRLVEEATKKGIKFGLWIEPEMVNPKSELYEKHKDWVIHL
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEEC
PNRDEYYFRNQLVLDLSNPKVQDFVFGVVDDLMTKYPGIAFFKWDCNSPITNIYSSYLKE
CCCCCEEEECEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
KQSHLYIDYVRGLYNVLERIKTKYPDLPMMLCSGGSGRIDYETLRYFTEFWPSDNTDPIE
HHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHH
RLFIQWGYSQLFPAKTLCAHVTTWNHDASIKFRTDVAMMGKLGFDIKLSDLNDNEKKFCR
HHHHHCCHHHHCCHHHHHEEEEECCCCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHH
DAVTNYNHLKPVVLEGDMYRLVSPYSGNHTSTQYVGKDKKGAVVFAFDIYSRYGEKLLPV
HHHCCCCCCCEEEEECCEEEEECCCCCCCCCCEECCCCCCCCEEEEEEHHHHCCCEEEEE
RLQGLDAGRQYRVKEINLMPGTNSSLQGNGELFSGEYLMTVGLNIFTGQRLNSRVIEVVA
EEECCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCEEEEECCEEEECCCHHHHHHHHCC
E
C
>Mature Secondary Structure
MYIMKVRILFLICFLSITCLLNAADKPVIQIHTDNSSLIFRVADNGRLYQSYLGKKLNHE
CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCC
ADISHLPQGTEAYITHGMEDYFEPAIHILHNDGNPSLLLKYVSHETKAVSQGVNETIITL
CCHHHCCCCCHHHHHCCHHHHHCCEEEEEECCCCHHEEEEEHHHHHHHHHCCCCCEEEEE
GDDKYPVTVKLHYVTYPAEDIIKTYTEISHKEKKPVVLHQYASSMLHLNRAKYYLTEFSG
CCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCC
DWAHEANISDQPLEFGKKVLDTKLGARANMFTPPFFQLSLDQLATENCGEVLVGTLGWTG
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHCCCCCEEEEEECCCC
NFRFTFEVDNKNELRIISGINPYASEYYLPAGVVFRTPDFYFTYSANGKGKASRNFHDWA
CEEEEEEECCCCCEEEEECCCCHHHCEECCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
RRYQLKDGDETRMTLLNNWEATYFDFNEEKLIGLIGDAAGLGVDMFLLDDGWFANKYPRS
HHCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCC
SDHQGLGDWDETADKLPNGIGRLVEEATKKGIKFGLWIEPEMVNPKSELYEKHKDWVIHL
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEEC
PNRDEYYFRNQLVLDLSNPKVQDFVFGVVDDLMTKYPGIAFFKWDCNSPITNIYSSYLKE
CCCCCEEEECEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
KQSHLYIDYVRGLYNVLERIKTKYPDLPMMLCSGGSGRIDYETLRYFTEFWPSDNTDPIE
HHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHH
RLFIQWGYSQLFPAKTLCAHVTTWNHDASIKFRTDVAMMGKLGFDIKLSDLNDNEKKFCR
HHHHHCCHHHHCCHHHHHEEEEECCCCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHH
DAVTNYNHLKPVVLEGDMYRLVSPYSGNHTSTQYVGKDKKGAVVFAFDIYSRYGEKLLPV
HHHCCCCCCCEEEEECCEEEEECCCCCCCCCCEECCCCCCCCEEEEEEHHHHCCCEEEEE
RLQGLDAGRQYRVKEINLMPGTNSSLQGNGELFSGEYLMTVGLNIFTGQRLNSRVIEVVA
EEECCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCEEEEECCEEEECCCHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1649890; 1660918; 12397186 [H]