Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348202

Identifier: 29348202

GI number: 29348202

Start: 3463202

End: 3464839

Strand: Reverse

Name: 29348202

Synonym: BT_2793

Alternate gene names: NA

Gene position: 3464839-3463202 (Counterclockwise)

Preceding gene: 29348203

Following gene: 29348201

Centisome position: 55.35

GC content: 44.87

Gene sequence:

>1638_bases
ATGCCTTCGTGTCCTAGAAATTATCCTTTTTACAATTGGGTGCCCAAACCGATAGGTATTATTATTCTGCTGTTCTTTTT
CCTGCCGATTCTTTCGGTGGGCGGGGTATACTCCGTGAACAGTACCGAGATGATGAGCGGCTTGGGTATTATTTCCGAGC
ATATTCAGTTTGCCAATTTTGTGACTTCCATCGGTATGGCGGCATTTGCTCCCTTCTTGTATGAACTAGTTTGTATACGA
CGGGAGAAACTGATGTGTATCGCAGGTTTTGCACTGATGTATGTATTCAGCTATGTATGTGCCAAAACCGACAGTATCTT
TTTGCTGGCACTCTGCAGCCTGCTGACAGGGTTCCTGCGTATGGTACTGATGATGGTCAATCTGTTTACGCTGATCAAAT
ATGCTTTTGGCATGGAGGCAACGCGTAATATTACTCCCGGCATGGAACCGAAAGACGCGACGGGATGGAATAAACTGGAT
ATCGAAAAATGTATCAGCCAGCCGGTAGTTTATCTGTTTTTTATGATCCTGGGGCAAATGGGTACGGCGCTAACGGCTTG
GCTGGCTTTCGAATACGAATGGAAATATGTATATTATTTTATGATGGGTATTCTGCTGCTGTCCATTCTGATACTGTTCA
TTACGATGCCTAATCATGGTTTTGCCGGACGTTTCCCTATCAACTTCCGCAAATTCGGCAATGTGACCGCATTTTGCATA
TCATTGACGTGCATCACTTATGTGCTGGTTTATGGCAAGGTGCTGGATTGGTATGATGATCCATCTATTTGCTGGGCAAC
GGCGATCAGTATCCTTTTTGCCGGGATTTTTCTTTATATGGATGTTACCCGGCGGTCTTCCTACTTTATTTTGGGGGCGT
TGAGGCTGCGTACCATTCGTATGGGGGCTTTGCTTTATTTATTGCTGATGATTATCAATTCCAGCGCAATGTTTGTCAAT
GTGTATGCAGGAGTCGGGATGCACCTGGATAATTTGCAGAATGCATCGCTGGCAAACTGGTGTATGGTCGGTTATTTTAT
CGGTGCCTTGATTTCCATTGTATTGGGGTCTAAAGGGGTGCATCTGAAATATCTTTTTGCTCTTGGCTTTTTCTTTCTGG
CATTGTCGGCAGGATTCATGTACTTCGAAGTGCAGACAGCCGGACTTTACGAACGAATGAAGTATCCCGTAATTATTCGT
ACCATCGGAATGATGATTTTATATGCATTGACGGCAGCATATGCCAATCAGCGGATGCCTTTCAAATATCTTTCGACCTG
GATTTGCATCATGCTTACCGTCCGTATGGTACTGGGACCGGGTATCGGAGGGGCTATTTATTCAAATGTACTGCAGGAGC
GCCAGCAACATTATATTACCCGTTATGCACAAAATGTTGATCTGGTAAACCCCGAAGCTTCTGCTTCGTATACCAATACC
GTGCAGGGAATGCAATATCAGGGAAAGAGTGAAACGGAAGCGCATAACATGGCTGCCATGTCCGTCAAGGGGCGGATACA
GGTGCAGGCTACGCTCTCTGCTGTGAAAGAAATGGCAGGGTGGACTATTTATGCAGGCGTTATTTGTATGATTTTTGTGC
TCGTAGTGCCTTATCCCAAACGAAAATTGCTAACTTAG

Upstream 100 bases:

>100_bases
GTATCCCTGTCCGTATTGATTTTACGGATTTATCGAAGGAAGATAATGATAAGCTGGCGGCGGGTATGATGGTAGTAGTA
AAAGCTAAACTCTGATAGCC

Downstream 100 bases:

>100_bases
TATCGTTTTTCAATAGTAATTTATCAGTGAGTCAGTGTTATGGATACTCAGCAGGAACGTTTATTACAGCTTGACCGCGA
TCTGAAAAGCGGGAAGAATA

Product: putative MFS transporter

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MPSCPRNYPFYNWVPKPIGIIILLFFFLPILSVGGVYSVNSTEMMSGLGIISEHIQFANFVTSIGMAAFAPFLYELVCIR
REKLMCIAGFALMYVFSYVCAKTDSIFLLALCSLLTGFLRMVLMMVNLFTLIKYAFGMEATRNITPGMEPKDATGWNKLD
IEKCISQPVVYLFFMILGQMGTALTAWLAFEYEWKYVYYFMMGILLLSILILFITMPNHGFAGRFPINFRKFGNVTAFCI
SLTCITYVLVYGKVLDWYDDPSICWATAISILFAGIFLYMDVTRRSSYFILGALRLRTIRMGALLYLLLMIINSSAMFVN
VYAGVGMHLDNLQNASLANWCMVGYFIGALISIVLGSKGVHLKYLFALGFFFLALSAGFMYFEVQTAGLYERMKYPVIIR
TIGMMILYALTAAYANQRMPFKYLSTWICIMLTVRMVLGPGIGGAIYSNVLQERQQHYITRYAQNVDLVNPEASASYTNT
VQGMQYQGKSETEAHNMAAMSVKGRIQVQATLSAVKEMAGWTIYAGVICMIFVLVVPYPKRKLLT

Sequences:

>Translated_545_residues
MPSCPRNYPFYNWVPKPIGIIILLFFFLPILSVGGVYSVNSTEMMSGLGIISEHIQFANFVTSIGMAAFAPFLYELVCIR
REKLMCIAGFALMYVFSYVCAKTDSIFLLALCSLLTGFLRMVLMMVNLFTLIKYAFGMEATRNITPGMEPKDATGWNKLD
IEKCISQPVVYLFFMILGQMGTALTAWLAFEYEWKYVYYFMMGILLLSILILFITMPNHGFAGRFPINFRKFGNVTAFCI
SLTCITYVLVYGKVLDWYDDPSICWATAISILFAGIFLYMDVTRRSSYFILGALRLRTIRMGALLYLLLMIINSSAMFVN
VYAGVGMHLDNLQNASLANWCMVGYFIGALISIVLGSKGVHLKYLFALGFFFLALSAGFMYFEVQTAGLYERMKYPVIIR
TIGMMILYALTAAYANQRMPFKYLSTWICIMLTVRMVLGPGIGGAIYSNVLQERQQHYITRYAQNVDLVNPEASASYTNT
VQGMQYQGKSETEAHNMAAMSVKGRIQVQATLSAVKEMAGWTIYAGVICMIFVLVVPYPKRKLLT
>Mature_544_residues
PSCPRNYPFYNWVPKPIGIIILLFFFLPILSVGGVYSVNSTEMMSGLGIISEHIQFANFVTSIGMAAFAPFLYELVCIRR
EKLMCIAGFALMYVFSYVCAKTDSIFLLALCSLLTGFLRMVLMMVNLFTLIKYAFGMEATRNITPGMEPKDATGWNKLDI
EKCISQPVVYLFFMILGQMGTALTAWLAFEYEWKYVYYFMMGILLLSILILFITMPNHGFAGRFPINFRKFGNVTAFCIS
LTCITYVLVYGKVLDWYDDPSICWATAISILFAGIFLYMDVTRRSSYFILGALRLRTIRMGALLYLLLMIINSSAMFVNV
YAGVGMHLDNLQNASLANWCMVGYFIGALISIVLGSKGVHLKYLFALGFFFLALSAGFMYFEVQTAGLYERMKYPVIIRT
IGMMILYALTAAYANQRMPFKYLSTWICIMLTVRMVLGPGIGGAIYSNVLQERQQHYITRYAQNVDLVNPEASASYTNTV
QGMQYQGKSETEAHNMAAMSVKGRIQVQATLSAVKEMAGWTIYAGVICMIFVLVVPYPKRKLLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61485; Mature: 61354

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCC
>Mature Secondary Structure 
PSCPRNYPFYNWVPKPIGIIILLFFFLPILSVGGVYSVNSTEMMSGLGIISEHIQFANF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHH
VTSIGMAAFAPFLYELVCIRREKLMCIAGFALMYVFSYVCAKTDSIFLLALCSLLTGFLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MVLMMVNLFTLIKYAFGMEATRNITPGMEPKDATGWNKLDIEKCISQPVVYLFFMILGQM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
GTALTAWLAFEYEWKYVYYFMMGILLLSILILFITMPNHGFAGRFPINFRKFGNVTAFCI
HHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHH
SLTCITYVLVYGKVLDWYDDPSICWATAISILFAGIFLYMDVTRRSSYFILGALRLRTIR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
MGALLYLLLMIINSSAMFVNVYAGVGMHLDNLQNASLANWCMVGYFIGALISIVLGSKGV
HHHHHHHHHHHHCCCHHEEEEHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
HLKYLFALGFFFLALSAGFMYFEVQTAGLYERMKYPVIIRTIGMMILYALTAAYANQRMP
HHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
FKYLSTWICIMLTVRMVLGPGIGGAIYSNVLQERQQHYITRYAQNVDLVNPEASASYTNT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VQGMQYQGKSETEAHNMAAMSVKGRIQVQATLSAVKEMAGWTIYAGVICMIFVLVVPYPK
HCCCCCCCCCCCHHHHHHHEEECCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
RKLLT
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA