| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348186
Identifier: 29348186
GI number: 29348186
Start: 3442351
End: 3444303
Strand: Reverse
Name: 29348186
Synonym: BT_2777
Alternate gene names: NA
Gene position: 3444303-3442351 (Counterclockwise)
Preceding gene: 29348191
Following gene: 29348185
Centisome position: 55.02
GC content: 41.01
Gene sequence:
>1953_bases ATGGGTAAATACAAATTTATAGAAGAAAGAGTGGAAACAATGTCTTCGTCGGAGCTTAAGATATTCTTGAATATACTGAA GAGCAGATCTAAGGAATTGATGTCAACTCTGGAGTCAGTAAGGGGAATAAAAGATTTGGAGGCTGTTTGTAAATCAACTC AGAAACTAAACAATCGTGTTTCTGAGTTTGACGGAGGATCTTTTCTTATATTAGTGGTTGGACCCGTGAAATCGGGAAAA TCTACTTTAGTAAATCTCATAGCACATGCTCACGTCAGCCCCACTCATTTCTTGGAGTGTACGGTGCGTCCGTCCATTAT TTCAAAAGGACAGGAGGAATCCATTACCCGTATTTTTTCTGTTGCTGATAAAGCTAGAAAGGTAGAACAGTTTGATTCGG TCATTGATAGCCTGCGCGGATTTGAAAAACTGGAAAACATTTCCGAGATAAGCATTGAAAAGAAAGAATTGAATGATGCT AATCTGGAGGAGTGTGTTTCGTTAGCTTTGGAAGAAAGCGTGATAAATACAGATCATACGCTGGTGACATCCATAACAAC TTCCGGTGGGGAGCTTTTGAAAGATAATATATTTCTGGTGGATATGCCCGGGCTGGATGGCGGGTATGTGAATTTGGATA ATCCTATTTATGAAACGATCTCTCAAAGGGCAGATTTCGTGATATTTGTGCAAAGTTCAAATTCTGCTATATCGAAGGTT TCCAATCGTTTTCTGAAGTTGCTGCAGGAGAATAATCCGAAAGTTCCGGTTTGTCTTCTACATAATGTGTTTGAAGCGGC TTACTGGCATTCGGAAGAGGAGAAGCAGGCTGTAATTAAGGCACAGGTAGAATTTGCCGAGAATGAAATGGGCAGACGTA ACTTCCAGTTGAAGGAGAATATATATAGTTTGAACTTGGGAAAAGTGGCGGATGCTGCCAGCTATGAGGGAATGGAGGAT CTTCAGGAAGAAGCTGCGAAATTTCAGAGATTTGAGAAGGATTTGTATGGCAAGGTGATCTCCAATAGTACTGATATACG TCTGAGAAGCGTAATCGGAAGAACGCTGAATCAGTTGGAAAAACTGGATAATTTAGTCGGAGAATCAATTGGCCAACAGG AAGCAATCGATATAGAATATCAGGCTGCGGCAACTTCGTTTGACGAGTTACTCCGTCAGGCGAGTGAACTTAGTTACGAT GGGAGCGATTTTAGAAAAATGGTGCAAGTCTATATGGATGATGATTTGAAAGAGTTTACTGAAATCGTTAGGGAGTATTA TGATTCCGGATGCAATTCCGCATTTGCCGGTGGAGCGAAGGGGAAAGATGCGACACGCAGCCTTGTTACAAAGTTTATGA CTGATTCGTCAGCGGCGATAAAAAGTAAGTTCCTTGATTCCCATGAACATAGCCTGGCCCGGCAGTATTTGCGGAAACTC TCTAACTTGAAAGATGATGTGGCTTTTATAGAGAAGATGAATACTTTTCTGAAGCAGAAAGGTTGTGCACCTTTTGACTC AGTGCCGCAAGTGACGGATTTTCCGGTGGTCGATTTTGATTTGCAGGGAGCTTTTGATGTGAAGAATATTAATAATCCGA CTGTTCCGCATATCGGAATACCCAATCCGTTCGGGACTTATTCGACAATGGAAATTCAGAGTTTTCTGAGAAAAGCGATG GAATGTATCACCGGAATCGATCATACGCATACCGGGAAAACGATCAAAGGATATCTTCAGCTGACTGTCGGGAAGAGTAT ATATAAGGCGGCTAATGACCTTTATGATCAGTATGTGCCTGTACGCAAACAAAGTATCATTGATTTTTTGGAACAACAAA AAACAATGTATCTGAATGCGCTGGTGTCTGATAAAGAAGAATTTGACAGGAAGGATGCGTTGCTTCGGTCAATAAATGCA CAAGTTCAGAGTTTTAAGGATTCAATAAGATAA
Upstream 100 bases:
>100_bases TGCTCTATACATTTTTTATTTCCCGACAAACTGCTAACTTTATCATCATTATTATAATGACATGTGAATAGTCGGTTGTA CCATTATTTAAATCTCGTTT
Downstream 100 bases:
>100_bases GAATAAGCCAATGAAACGAAATTTATTAATTATCACACTCCTGTTTTTGGGCTCTTTTGTGATTTTATTGTTGGGTAACA TCATTATTATTGGTGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGK STLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDA NLEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMED LQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYD GSDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAM ECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINA QVQSFKDSIR
Sequences:
>Translated_650_residues MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGK STLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDA NLEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMED LQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYD GSDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAM ECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINA QVQSFKDSIR >Mature_649_residues GKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGKS TLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDAN LEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKVS NRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMEDL QEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDG SDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKLS NLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAME CITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQ VQSFKDSIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73143; Mature: 73011
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRV CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SEFDGGSFLILVVGPVKSGKSTLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFS HHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEECHHHHCCCCHHHHHHHHH VADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDANLEECVSLALEESVINTDHT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE LVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV EEEEEECCCCHHHHCCEEEEECCCCCCCEECCCCHHHHHHHCCCCEEEEEECCCHHHHHH SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKEN HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH IYSLNLGKVADAASYEGMEDLQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLE HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDGSDFRKMVQVYMDDDLKEFT HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH EIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGI HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCC PNPFGTYSTMEIQSFLRKAMECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQVQSFKDSIR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRV CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SEFDGGSFLILVVGPVKSGKSTLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFS HHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEECHHHHCCCCHHHHHHHHH VADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDANLEECVSLALEESVINTDHT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE LVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV EEEEEECCCCHHHHCCEEEEECCCCCCCEECCCCHHHHHHHCCCCEEEEEECCCHHHHHH SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKEN HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH IYSLNLGKVADAASYEGMEDLQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLE HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDGSDFRKMVQVYMDDDLKEFT HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH EIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGI HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCC PNPFGTYSTMEIQSFLRKAMECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQVQSFKDSIR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA