Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348104

Identifier: 29348104

GI number: 29348104

Start: 3358978

End: 3359646

Strand: Reverse

Name: 29348104

Synonym: BT_2695

Alternate gene names: NA

Gene position: 3359646-3358978 (Counterclockwise)

Preceding gene: 29348107

Following gene: 29348103

Centisome position: 53.67

GC content: 44.99

Gene sequence:

>669_bases
ATGAAGAAAGGAGGATGGCTTATGAAGAAAGGATATATTTTGTGGTTGCTGATAAGCGTGATTAGCCTTCCGGTAGTTGC
GCAGAATATCATTTATTCAAACTTGAAAGAGTTGATGGTTCAAGATGGCGATACCCTTGCAGTGTTGCGAGTAGAGAAGC
GTTCCAGAAGCCAGATTCTATTGACAGGCGGGGCTGACTACCGGATAACGGCAGGCAATGATGAATCTATGTGCCGCCAG
TTGAAGAAGCGTTGTTTTGCGGTGCGTACTTCTGAAGGAGACTTATTTATCAACTGTCGTAAGTTGCGTTATAAAAAGAT
GCGTTTCGGGGTGTGGTATGCTCCGGCTGTTCAGTTGGGCAAAAATATCTATTTCTGTGCGATGCCATTAGGGTCGGTAA
TCGGTGGGACATTTGCAGAAGAAGATGATGTGAAACTGGGCGGAAATGTGGGAGATGCTCTTGCTGCTTCAAGTCTGGTT
ACTAAACGGGTCTGCTATGAGCTGAACGGTGAGACCGGAAAGATTGATTTTGTAGGAAGAGAAAAGATGGCGCAACTGCT
GGAAAAACATCCGGAATGGAAAAAAGCCTACCTTACAAAAGACAGTCAGGAAGCGAAGCATACCTTCAAGTATCTGCAAA
TGCTGTGTGGTGAGCAGCAGAAAGAATAA

Upstream 100 bases:

>100_bases
AAGGCGAAAGGGGCTTCTTGGCTTCTTTTTTCAACATTTCTTTTTCCATTCTTGCATTTATGCGCTAAAATTTATAACTT
TCCACTCGAAAAGGCGTTGA

Downstream 100 bases:

>100_bases
ATAATACCTTTCTGATAATAAATCTACCAAAACCTTTGTCTTTTCTCTTCTTTTTTTCTATATTGCGAAGAGTTATAGAA
CTGTATTGCTTACAGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKGGWLMKKGYILWLLISVISLPVVAQNIIYSNLKELMVQDGDTLAVLRVEKRSRSQILLTGGADYRITAGNDESMCRQ
LKKRCFAVRTSEGDLFINCRKLRYKKMRFGVWYAPAVQLGKNIYFCAMPLGSVIGGTFAEEDDVKLGGNVGDALAASSLV
TKRVCYELNGETGKIDFVGREKMAQLLEKHPEWKKAYLTKDSQEAKHTFKYLQMLCGEQQKE

Sequences:

>Translated_222_residues
MKKGGWLMKKGYILWLLISVISLPVVAQNIIYSNLKELMVQDGDTLAVLRVEKRSRSQILLTGGADYRITAGNDESMCRQ
LKKRCFAVRTSEGDLFINCRKLRYKKMRFGVWYAPAVQLGKNIYFCAMPLGSVIGGTFAEEDDVKLGGNVGDALAASSLV
TKRVCYELNGETGKIDFVGREKMAQLLEKHPEWKKAYLTKDSQEAKHTFKYLQMLCGEQQKE
>Mature_222_residues
MKKGGWLMKKGYILWLLISVISLPVVAQNIIYSNLKELMVQDGDTLAVLRVEKRSRSQILLTGGADYRITAGNDESMCRQ
LKKRCFAVRTSEGDLFINCRKLRYKKMRFGVWYAPAVQLGKNIYFCAMPLGSVIGGTFAEEDDVKLGGNVGDALAASSLV
TKRVCYELNGETGKIDFVGREKMAQLLEKHPEWKKAYLTKDSQEAKHTFKYLQMLCGEQQKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25090; Mature: 25090

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGGWLMKKGYILWLLISVISLPVVAQNIIYSNLKELMVQDGDTLAVLRVEKRSRSQIL
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEE
LTGGADYRITAGNDESMCRQLKKRCFAVRTSEGDLFINCRKLRYKKMRFGVWYAPAVQLG
EECCCCEEEECCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHCCEEEHHHHHHC
KNIYFCAMPLGSVIGGTFAEEDDVKLGGNVGDALAASSLVTKRVCYELNGETGKIDFVGR
CCEEEEECCHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH
EKMAQLLEKHPEWKKAYLTKDSQEAKHTFKYLQMLCGEQQKE
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKGGWLMKKGYILWLLISVISLPVVAQNIIYSNLKELMVQDGDTLAVLRVEKRSRSQIL
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEE
LTGGADYRITAGNDESMCRQLKKRCFAVRTSEGDLFINCRKLRYKKMRFGVWYAPAVQLG
EECCCCEEEECCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHCCEEEHHHHHHC
KNIYFCAMPLGSVIGGTFAEEDDVKLGGNVGDALAASSLVTKRVCYELNGETGKIDFVGR
CCEEEEECCHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH
EKMAQLLEKHPEWKKAYLTKDSQEAKHTFKYLQMLCGEQQKE
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA