| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is cusB [H]
Identifier: 29348096
GI number: 29348096
Start: 3349011
End: 3350027
Strand: Reverse
Name: cusB [H]
Synonym: BT_2687
Alternate gene names: 29348096
Gene position: 3350027-3349011 (Counterclockwise)
Preceding gene: 29348097
Following gene: 29348095
Centisome position: 53.51
GC content: 48.28
Gene sequence:
>1017_bases ATGAAAAAAGGTATCCAATTAGTGGCTCTGCTATTGACAGTAGTAATGAGCTCATGTACGGGTGGAAAAGATAAGGCTGC TGTGAAACAGGAAGACGAGAAGCCCAGAGTAAAAGTGGCTGATGTAACAGCCCGTCCCGTAGATCAGATACAGGATTATA CAGCGACGGTAGAAGCTGAAGTAAAGAACAACATTGCTCCTTCGTCACCTGTCCGCATCGACCGGATTCTGGTAGAAGTG GGCGACCGTGTATCCAAAGGCCAGAAGCTGGTGCAGATGGATGCAGCCAACCTCACACAGACGAAACTGCAACTGGACAA TCAGAAAATTGAATTTAATCGTATCGACGAACTTTATAAGGTAGGCGGTGCTTCCAAATCAGAGTGGGATGCTGCGAAGA TGCAGCTCGATGTGAAGCAGACTGCTTATGATAATCTGGTAGAGAATACGTTTCTGTTGAGCCCGATCAACGGAGTAATC ACTGCCCGTAATTACGATAATGGTGATATGTATAGTGGCGGAAGTCCGGTGCTGGTAGTAGAGCAGATCACTCCGGTCAA GCTGATGATCAATGTGTCTGAAACCTACTTCACGAAGGTGAAGAAAGGCGAACCGGTAGATGTGAAGCTGGATGTATATG GCGACGAACTGTTCAAGGGAACTATCAGCCTGATCTATCCGACTATCGACGCAACTACCCGTACTTTCCAGATCGAGATC AAGTTGGACAACAAAGATCAGCGTGTACGTCCGGGAATGTTTGCCCGTGCTACCTTGAACTTCGGTACGGCGGACAACGT CGTAGTACCCGACTTGGCTATTGTGAAACAGGCAGGTTCCGGCGATCGCTATGTGTACGTTTATAAAGATGGCAAAGTGT CCTACAACAAAGTGGAGTTAGGCAGACGTATGGGCTCGGAGTATGAGCTGAAATCCGGTGTGCCCGATAACTCGCAGGTG GTAGTGGCCGGACAGGCACGTCTGATAAACGGTACGGAAGTAGAGATCGAGAAGTAA
Upstream 100 bases:
>100_bases TACAATCAATCAATCTACGATTACCTGGTAGCTAAGGCTGACCTTGATCAGGTTTTGGGAAAACAATAAAGATAGACAAC TAAAATTACAACTAAGGAAT
Downstream 100 bases:
>100_bases AATCACTATTAAACTAATCACTATAAAGAAATGAGTTTATACGAAGGTGCGGTTAAGAAACCGATTATGACCTCCCTCTG CTTTCTGGCAGTGGTGATTT
Product: cation efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKKGIQLVALLLTVVMSSCTGGKDKAAVKQEDEKPRVKVADVTARPVDQIQDYTATVEAEVKNNIAPSSPVRIDRILVEV GDRVSKGQKLVQMDAANLTQTKLQLDNQKIEFNRIDELYKVGGASKSEWDAAKMQLDVKQTAYDNLVENTFLLSPINGVI TARNYDNGDMYSGGSPVLVVEQITPVKLMINVSETYFTKVKKGEPVDVKLDVYGDELFKGTISLIYPTIDATTRTFQIEI KLDNKDQRVRPGMFARATLNFGTADNVVVPDLAIVKQAGSGDRYVYVYKDGKVSYNKVELGRRMGSEYELKSGVPDNSQV VVAGQARLINGTEVEIEK
Sequences:
>Translated_338_residues MKKGIQLVALLLTVVMSSCTGGKDKAAVKQEDEKPRVKVADVTARPVDQIQDYTATVEAEVKNNIAPSSPVRIDRILVEV GDRVSKGQKLVQMDAANLTQTKLQLDNQKIEFNRIDELYKVGGASKSEWDAAKMQLDVKQTAYDNLVENTFLLSPINGVI TARNYDNGDMYSGGSPVLVVEQITPVKLMINVSETYFTKVKKGEPVDVKLDVYGDELFKGTISLIYPTIDATTRTFQIEI KLDNKDQRVRPGMFARATLNFGTADNVVVPDLAIVKQAGSGDRYVYVYKDGKVSYNKVELGRRMGSEYELKSGVPDNSQV VVAGQARLINGTEVEIEK >Mature_338_residues MKKGIQLVALLLTVVMSSCTGGKDKAAVKQEDEKPRVKVADVTARPVDQIQDYTATVEAEVKNNIAPSSPVRIDRILVEV GDRVSKGQKLVQMDAANLTQTKLQLDNQKIEFNRIDELYKVGGASKSEWDAAKMQLDVKQTAYDNLVENTFLLSPINGVI TARNYDNGDMYSGGSPVLVVEQITPVKLMINVSETYFTKVKKGEPVDVKLDVYGDELFKGTISLIYPTIDATTRTFQIEI KLDNKDQRVRPGMFARATLNFGTADNVVVPDLAIVKQAGSGDRYVYVYKDGKVSYNKVELGRRMGSEYELKSGVPDNSQV VVAGQARLINGTEVEIEK
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=299, Percent_Identity=25.0836120401338, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789929, Length=363, Percent_Identity=24.5179063360882, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082036, Length=300, Percent_Identity=25.3333333333333, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786668, Length=377, Percent_Identity=23.6074270557029, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37305; Mature: 37305
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGIQLVALLLTVVMSSCTGGKDKAAVKQEDEKPRVKVADVTARPVDQIQDYTATVEAE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEEE VKNNIAPSSPVRIDRILVEVGDRVSKGQKLVQMDAANLTQTKLQLDNQKIEFNRIDELYK HHCCCCCCCCCHHHHHHHHHCCHHHCCCEEEEECCCCCEEEEEEECCCEEEHHHHHHHHH VGGASKSEWDAAKMQLDVKQTAYDNLVENTFLLSPINGVITARNYDNGDMYSGGSPVLVV HCCCCCCCCCHHHEEEEHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCEEEE EQITPVKLMINVSETYFTKVKKGEPVDVKLDVYGDELFKGTISLIYPTIDATTRTFQIEI ECCCCEEEEEEECHHHHHHHCCCCCCEEEEEECCCCHHHCEEEEEEEECCCCEEEEEEEE KLDNKDQRVRPGMFARATLNFGTADNVVVPDLAIVKQAGSGDRYVYVYKDGKVSYNKVEL EECCCCCCCCCCEEEEEEEECCCCCCEECCCHHEEEECCCCCEEEEEEECCCEEEHHHHH GRRMGSEYELKSGVPDNSQVVVAGQARLINGTEVEIEK HHHCCCCEEECCCCCCCCEEEEECCEEEECCCEEEEEC >Mature Secondary Structure MKKGIQLVALLLTVVMSSCTGGKDKAAVKQEDEKPRVKVADVTARPVDQIQDYTATVEAE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEEE VKNNIAPSSPVRIDRILVEVGDRVSKGQKLVQMDAANLTQTKLQLDNQKIEFNRIDELYK HHCCCCCCCCCHHHHHHHHHCCHHHCCCEEEEECCCCCEEEEEEECCCEEEHHHHHHHHH VGGASKSEWDAAKMQLDVKQTAYDNLVENTFLLSPINGVITARNYDNGDMYSGGSPVLVV HCCCCCCCCCHHHEEEEHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCEEEE EQITPVKLMINVSETYFTKVKKGEPVDVKLDVYGDELFKGTISLIYPTIDATTRTFQIEI ECCCCEEEEEEECHHHHHHHCCCCCCEEEEEECCCCHHHCEEEEEEEECCCCEEEEEEEE KLDNKDQRVRPGMFARATLNFGTADNVVVPDLAIVKQAGSGDRYVYVYKDGKVSYNKVEL EECCCCCCCCCCEEEEEEEECCCCCCEECCCHHEEEECCCCCEEEEEEECCCEEEHHHHH GRRMGSEYELKSGVPDNSQVVVAGQARLINGTEVEIEK HHHCCCCEEECCCCCCCCEEEEECCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]