| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347947
Identifier: 29347947
GI number: 29347947
Start: 3170856
End: 3171239
Strand: Reverse
Name: 29347947
Synonym: BT_2537
Alternate gene names: NA
Gene position: 3171239-3170856 (Counterclockwise)
Preceding gene: 29347949
Following gene: 29347937
Centisome position: 50.66
GC content: 42.45
Gene sequence:
>384_bases ATGATTTCCTGTTTATTAAGAATACACAGTTTACGTTTTTTCGACGGAGGCTTGCATGAGGTTCCTGTGGAAGAAGTGAT GACGGTTGCGCTTATTGCGATATTCATCTTTGTTCCGTGCCTGTGGCTTGTCCGGTATTTAAAAGATAAGAGGCTGGACT CGGACGAGAAAGACAAGTTTATACAAATACATATTATCTCGACCATTGTCCTGACTATTGCGGGCGGTGTTTTTGCACGG ATGTCCGGACTTGTCAATAAATGGATAGACGAACAGCCGTTGATTATCGCTGTTTACATCGCTTTGGCGCTTAGTTCCTT CGGCATCATTGTCGGAAAAATGATCGACTTTTGGGTGTATTGTCTCCGAAAGAAGATGTTTTAA
Upstream 100 bases:
>100_bases TCCGGTGACTCAGGAGCCGGGATGTCCGGAGAACGACCGGCTAGGCGATGGAAAGGGAATGAAGAATATGAATAAAGAAT TAACGGATGTAGTATAAATG
Downstream 100 bases:
>100_bases GTATCTGTATATAGATGCCTGTTGCCTCTGCCCGAAGAAGGTTGGAAACAGGCTTTGTCCGGTATTTATTGCTAAAGTAT GGTTTTGAGGGTCGTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF
Sequences:
>Translated_127_residues MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF >Mature_127_residues MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14577; Mature: 14577
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKF CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE IQIHIISTIVLTIAGGVFARMSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVY EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLRKKMF HHHHHCC >Mature Secondary Structure MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKF CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE IQIHIISTIVLTIAGGVFARMSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVY EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLRKKMF HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA