| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347930
Identifier: 29347930
GI number: 29347930
Start: 3144206
End: 3144877
Strand: Reverse
Name: 29347930
Synonym: BT_2520
Alternate gene names: NA
Gene position: 3144877-3144206 (Counterclockwise)
Preceding gene: 29347931
Following gene: 29347929
Centisome position: 50.23
GC content: 45.24
Gene sequence:
>672_bases ATGGATAAAGAAAAAGAGCATATCATAGCGGATAAAACAATGTTGCGGGTGGCACGGATCACCTCCATCGTGTTTACTCC ATTTTCTATACCGTTTCTGGCGTTTTTGGTGTTATTCCTGTTTTCTTATCTCCGTATCATGCCGATACTTTATAAGGGAA TTGTGTTGGGAATCGTTTACTGCTTCACCATACTGACGCCCACCATCACCATTTTCCTGTTCCGGAAGATCAACGGGTTT GCCCGTCAGGAACTGAGTGAGCGTAAGAAACGTTATGTACCTATCCTGCTGACTATCATTTCGTATGTGTTCTGCCTGCT GATGATGCGTAAACTGAATATTCCCTGGTATATGACCGGAATCATTTTTGTTTCCCTGGTGATATCGATCATCTGCATTC TGGTCAATCTGAAATGGAAACTGAGCGAACACATGGCGGGGATGGGCGGTATTATCGGCGGACTGGTTTCGTTCAGTGCG CTGTTCAGCTATAATCCGGTAGTGTGGTTGTGCCTGTTTATTCTGATTGCAGGCATATTGGGTTCGGCGCGGATTGTGCT GGGGCATCACACTTTGGGCGAAGTGCTTTCCGGTTTTGTAGTCGGGCTGGTCTGCTCCTTTTTGATACTCCATCCGGCGT ACAACCTTATATTCAGAGTATTTTTATTTTAA
Upstream 100 bases:
>100_bases GTACGGTGGCGAAATACCGTCAGCAGTTGAATATACCGGTGGCAAGACTGAGAAAGTGAGTTTAAAGTATTAACTATAAA GTATTAAGTATTAGGTGCTG
Downstream 100 bases:
>100_bases AAACAATATAAATCCTAAAAACTAATTATTATGAACTTTCCACAGAACTTGAAGTACACGAATGAACACGAGTGGATTCG CGTAGAAGGAGACATCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF
Sequences:
>Translated_223_residues MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF >Mature_223_residues MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25366; Mature: 25366
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVY CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFTILTPTITIFLFRKINGFARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSALFSYNPVVWLCLFILIAGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVY CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFTILTPTITIFLFRKINGFARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSALFSYNPVVWLCLFILIAGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA