Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347921

Identifier: 29347921

GI number: 29347921

Start: 3135438

End: 3135857

Strand: Reverse

Name: 29347921

Synonym: BT_2511

Alternate gene names: NA

Gene position: 3135857-3135438 (Counterclockwise)

Preceding gene: 29347922

Following gene: 29347915

Centisome position: 50.09

GC content: 42.14

Gene sequence:

>420_bases
ATGGAAGAAAAAGTTTATCTGGATAAGTTGGCAAAAAGAGACATCAAGCCGACGGCTATCAGACTTCTCATATTGAAAAG
TATGATGGAAGCGGGGCGTGCCGTGTCTCAGCTTGATCTTGAAACGTTGCTGGATACGGTTGATAAATCGACTATATCCC
GTACAATCACGCTTTTTTTGTCTCATCATCTGATACATAGCATAGACGACGGAAGCGGTTCGTGGAAGTATGCCGTTTGC
GATGATTCCTGCAACTGTGTCCTGAAAGACTTGCATTCACATTTTTATTGCGAGAAATGCCATCGGACATTTTGTTTGGA
AAAGATTCATATTCCGGTTATCGACTTACCGAAAGGATTCACTTTGCATAGTGTGAATTATGTAGTAAAGGGAGTGTGTG
CGGAGTGCTCAAAAGTGTAG

Upstream 100 bases:

>100_bases
ACTGGCTACACTTTGGGAAGCTGTTTTCGCCGATGTTGGTGTAGCACTGATTGCTATCATGAATGCCGTAAGGATACAGA
AAATGATAAAATAAAAGAAT

Downstream 100 bases:

>100_bases
GATTAATTGCAGACAAGCAGTAATGGTAAAAGAAAAACACCGGAACTCGAACGGAAAAATATCGTTGAGTTCCGGTGTTT
ATTATATTAATGATACTGGT

Product: putative transcription regulator

Products: NA

Alternate protein names: Ferric Uptake Regulator Fur Family; Fur Family Transcriptional Regulator Protein; Ferric Uptake Regulator Family Protein; Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEEKVYLDKLAKRDIKPTAIRLLILKSMMEAGRAVSQLDLETLLDTVDKSTISRTITLFLSHHLIHSIDDGSGSWKYAVC
DDSCNCVLKDLHSHFYCEKCHRTFCLEKIHIPVIDLPKGFTLHSVNYVVKGVCAECSKV

Sequences:

>Translated_139_residues
MEEKVYLDKLAKRDIKPTAIRLLILKSMMEAGRAVSQLDLETLLDTVDKSTISRTITLFLSHHLIHSIDDGSGSWKYAVC
DDSCNCVLKDLHSHFYCEKCHRTFCLEKIHIPVIDLPKGFTLHSVNYVVKGVCAECSKV
>Mature_139_residues
MEEKVYLDKLAKRDIKPTAIRLLILKSMMEAGRAVSQLDLETLLDTVDKSTISRTITLFLSHHLIHSIDDGSGSWKYAVC
DDSCNCVLKDLHSHFYCEKCHRTFCLEKIHIPVIDLPKGFTLHSVNYVVKGVCAECSKV

Specific function: Unknown

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15738; Mature: 15738

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKVYLDKLAKRDIKPTAIRLLILKSMMEAGRAVSQLDLETLLDTVDKSTISRTITLFL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHHLIHSIDDGSGSWKYAVCDDSCNCVLKDLHSHFYCEKCHRTFCLEKIHIPVIDLPKGF
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
TLHSVNYVVKGVCAECSKV
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEKVYLDKLAKRDIKPTAIRLLILKSMMEAGRAVSQLDLETLLDTVDKSTISRTITLFL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHHLIHSIDDGSGSWKYAVCDDSCNCVLKDLHSHFYCEKCHRTFCLEKIHIPVIDLPKGF
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
TLHSVNYVVKGVCAECSKV
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA