| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347868
Identifier: 29347868
GI number: 29347868
Start: 3074682
End: 3076562
Strand: Reverse
Name: 29347868
Synonym: BT_2458
Alternate gene names: NA
Gene position: 3076562-3074682 (Counterclockwise)
Preceding gene: 29347869
Following gene: 29347867
Centisome position: 49.14
GC content: 43.17
Gene sequence:
>1881_bases ATGAAAATTGTTATGATAAAAAAAATTATATATATTTCTCTCATCTGGATGGTATTTCACGGAGCGAGTCTTCATGCTGC CAGTTTATTGGTAGAAGCAGAAAGTTTCACGGAAAAAGGAGGCTGGGTAGTGGACCAACAATTTATGGACTTGATGGGAT CACCTTATTTACTGGCACACGGTCTAGGTAGTCCTGTTGAAAATGCGAGTACCAATGTACAACTTCCAGAAAATGGCACA TATTATATTTTTGTACGCACCTACAACTGGACGTCTCCATGGCAGGAGGGTGAAGGGCCCGGATTGTTCGGTTTGTCAGT AAACGGAAAGAAAATCTCTTACCGGTTGGGTATTATAGGCAATCAGTGGATATGGCAGTATGCCGGGCAATATCAGGCAA CAGAAAAGAATATTCACATTGTTTTGCATGACTTGAAAGGTTTTGACGGGCGGTGTGATGCTATTTATTTTACGACACGG AAAGATGATATTCCGCCATCGGATATGGCGGCTTTAAATAACTTTCGTCGTGCTAAACTTGGATTATTAGCCCCCCCAAA AACAGAATCATATGATTTAGTAGTTATAGGTGCAGGTATTGCAGGTATGAGTACAGCAGTATCTGCCGCCCGCCTGGGCT GTAAAGTCGCACTTATCAATGATCGCCCTGTAGTCGGTGGAAACAATAGTTCCGAGATTCGTGTTCATTTGGGAGGAGCT ATCGAGATCGGAAAATATCCTGAACTGGGGGGGCTGCAAAAAGAGTTCGGTCCCGTCAAGGAGGGTAATGCACAACCGGC AGGCAATTATGAAGATCATAAAAAAATGGAATGGCTGCAAGCTGAAACTAATGTTTCCCTGTTTCTTAATTATCGGGCAT TTTCGGTGAAGAAGGAAGAGGACCGGATCATCTCGATAACCGCTTGTCATATTGAATCCGGTGAAGAAATCGAATTTTAT GGTCGTTTATTTGCTGACTGTACTGGTGATGGCACTATCGGTTATCTGGCCGGGGCAGACTATCGTATGGGCCGTGAAAG CCGTTCTGAATACGGTGAGACTATAGCTCCCGAAATAGCTGATAGCTTAGTAATGGGCACTTCTGTTCAATGGTATTCTG TGGAAGACACAAAAACATCCTATTTTCCGGAATTCCGGTACGGCATCGAATTCAATGAGGAGACCTGTGAACCTGTCACT TATGGTGAATGGACTTGGGAAACCGGAATGAATAAAAATCAGATTAATGATTCTGAACAAATACGTGACTATGGAATGTT AGTTATATATTCTAATTGGAGCTACTTGAAAAATCAATCGGAACGAAGAAAATATTATAAAAAACGTTCATTGGAATGGG TAGCCTACATTGCCGGAAAGCGGGAATCCCGGAGGCTATTGGGCGACTATGTACTGAAAGAGGATGATTTAACAAAGCAC GTAGCCCATGAGGACGCATCTTTCACTACTACCTGGAGTATTGATCTGCACCGGCCCGACCCCGAGAATACCCGGTATTT CCCGGGACGGGAATTCAAAGCGACGACAGACCATGTAGTAATTTATCCCTATCCTGTTCCCTACCGATGTCTTTATTCCC GTAATATAGACAATCTGTTCATGGCAGGACGCAATATCAGTGTCACACATGTTGCCTTGGGAACCGTACGAGTTATGCGC ACTACAGGTATGATGGGGGAAGTTGTAGGCATGGCAGCCTCACTATGCAAAAAATATCAAGCCACTCCCCGTGACATATA CCATTATTATTTGGAGGAATTAAAATCACTCATGCAAAAGGGAGTGAATAAAAAGGGATTACCGAATAATCAACGATATA ATGAAGGAGGCAGGCTAAACCAGATACCGAAGGTAAAGTAA
Upstream 100 bases:
>100_bases GATTAAAGCCCTCAAAATGGAATTGACAACTCCACTGATGGCCCGGCTGACTATCAAGGAGATTATCCTTCGCTACTATG AATAAACAAGTATAAGAATA
Downstream 100 bases:
>100_bases GGATACATCTCTGTCTGCCAGATTTCCACATACGAAAGTTTAACAATTTATTAGATTAGGCATTATGATAAGAAAAATCA TATTCTTAGAAATGTTATTA
Product: putative pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: Pyridine Nucleotide-Disulphide Oxidoreductase; Coagulation Factor 5/8 Type Domain Protein; Pyridine Nucleotide-Disulfide Oxidoreductase; Glucose-Inhibited Division Protein A; Tat Pathway Signal Sequence; Invasion Protein IbeA; Protein Involved In Invasion; NADH-Dependant Oxidoreductase
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MKIVMIKKIIYISLIWMVFHGASLHAASLLVEAESFTEKGGWVVDQQFMDLMGSPYLLAHGLGSPVENASTNVQLPENGT YYIFVRTYNWTSPWQEGEGPGLFGLSVNGKKISYRLGIIGNQWIWQYAGQYQATEKNIHIVLHDLKGFDGRCDAIYFTTR KDDIPPSDMAALNNFRRAKLGLLAPPKTESYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRVHLGGA IEIGKYPELGGLQKEFGPVKEGNAQPAGNYEDHKKMEWLQAETNVSLFLNYRAFSVKKEEDRIISITACHIESGEEIEFY GRLFADCTGDGTIGYLAGADYRMGRESRSEYGETIAPEIADSLVMGTSVQWYSVEDTKTSYFPEFRYGIEFNEETCEPVT YGEWTWETGMNKNQINDSEQIRDYGMLVIYSNWSYLKNQSERRKYYKKRSLEWVAYIAGKRESRRLLGDYVLKEDDLTKH VAHEDASFTTTWSIDLHRPDPENTRYFPGREFKATTDHVVIYPYPVPYRCLYSRNIDNLFMAGRNISVTHVALGTVRVMR TTGMMGEVVGMAASLCKKYQATPRDIYHYYLEELKSLMQKGVNKKGLPNNQRYNEGGRLNQIPKVK
Sequences:
>Translated_626_residues MKIVMIKKIIYISLIWMVFHGASLHAASLLVEAESFTEKGGWVVDQQFMDLMGSPYLLAHGLGSPVENASTNVQLPENGT YYIFVRTYNWTSPWQEGEGPGLFGLSVNGKKISYRLGIIGNQWIWQYAGQYQATEKNIHIVLHDLKGFDGRCDAIYFTTR KDDIPPSDMAALNNFRRAKLGLLAPPKTESYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRVHLGGA IEIGKYPELGGLQKEFGPVKEGNAQPAGNYEDHKKMEWLQAETNVSLFLNYRAFSVKKEEDRIISITACHIESGEEIEFY GRLFADCTGDGTIGYLAGADYRMGRESRSEYGETIAPEIADSLVMGTSVQWYSVEDTKTSYFPEFRYGIEFNEETCEPVT YGEWTWETGMNKNQINDSEQIRDYGMLVIYSNWSYLKNQSERRKYYKKRSLEWVAYIAGKRESRRLLGDYVLKEDDLTKH VAHEDASFTTTWSIDLHRPDPENTRYFPGREFKATTDHVVIYPYPVPYRCLYSRNIDNLFMAGRNISVTHVALGTVRVMR TTGMMGEVVGMAASLCKKYQATPRDIYHYYLEELKSLMQKGVNKKGLPNNQRYNEGGRLNQIPKVK >Mature_626_residues MKIVMIKKIIYISLIWMVFHGASLHAASLLVEAESFTEKGGWVVDQQFMDLMGSPYLLAHGLGSPVENASTNVQLPENGT YYIFVRTYNWTSPWQEGEGPGLFGLSVNGKKISYRLGIIGNQWIWQYAGQYQATEKNIHIVLHDLKGFDGRCDAIYFTTR KDDIPPSDMAALNNFRRAKLGLLAPPKTESYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRVHLGGA IEIGKYPELGGLQKEFGPVKEGNAQPAGNYEDHKKMEWLQAETNVSLFLNYRAFSVKKEEDRIISITACHIESGEEIEFY GRLFADCTGDGTIGYLAGADYRMGRESRSEYGETIAPEIADSLVMGTSVQWYSVEDTKTSYFPEFRYGIEFNEETCEPVT YGEWTWETGMNKNQINDSEQIRDYGMLVIYSNWSYLKNQSERRKYYKKRSLEWVAYIAGKRESRRLLGDYVLKEDDLTKH VAHEDASFTTTWSIDLHRPDPENTRYFPGREFKATTDHVVIYPYPVPYRCLYSRNIDNLFMAGRNISVTHVALGTVRVMR TTGMMGEVVGMAASLCKKYQATPRDIYHYYLEELKSLMQKGVNKKGLPNNQRYNEGGRLNQIPKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70883; Mature: 70883
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVMIKKIIYISLIWMVFHGASLHAASLLVEAESFTEKGGWVVDQQFMDLMGSPYLLAH CEEEEHHHHHHHHHHHHHHCCCCHHHHHEEEEHHHHHCCCCEEECHHHHHHCCCCEEEEC GLGSPVENASTNVQLPENGTYYIFVRTYNWTSPWQEGEGPGLFGLSVNGKKISYRLGIIG CCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEEC NQWIWQYAGQYQATEKNIHIVLHDLKGFDGRCDAIYFTTRKDDIPPSDMAALNNFRRAKL CCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC GLLAPPKTESYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRVHLGGA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCCCCEEEEEECCE IEIGKYPELGGLQKEFGPVKEGNAQPAGNYEDHKKMEWLQAETNVSLFLNYRAFSVKKEE EEECCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCC DRIISITACHIESGEEIEFYGRLFADCTGDGTIGYLAGADYRMGRESRSEYGETIAPEIA CCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHH DSLVMGTSVQWYSVEDTKTSYFPEFRYGIEFNEETCEPVTYGEWTWETGMNKNQINDSEQ HHHHCCCCEEEEEECCCCCCCCCCEEECEEECCCCCCCCCCCCEEECCCCCCCCCCCHHH IRDYGMLVIYSNWSYLKNQSERRKYYKKRSLEWVAYIAGKRESRRLLGDYVLKEDDLTKH HHHCCEEEEEECCHHHHCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHH VAHEDASFTTTWSIDLHRPDPENTRYFPGREFKATTDHVVIYPYPVPYRCLYSRNIDNLF HHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHE MAGRNISVTHVALGTVRVMRTTGMMGEVVGMAASLCKKYQATPRDIYHYYLEELKSLMQK ECCCCCEEEEEEHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVNKKGLPNNQRYNEGGRLNQIPKVK CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIVMIKKIIYISLIWMVFHGASLHAASLLVEAESFTEKGGWVVDQQFMDLMGSPYLLAH CEEEEHHHHHHHHHHHHHHCCCCHHHHHEEEEHHHHHCCCCEEECHHHHHHCCCCEEEEC GLGSPVENASTNVQLPENGTYYIFVRTYNWTSPWQEGEGPGLFGLSVNGKKISYRLGIIG CCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEEC NQWIWQYAGQYQATEKNIHIVLHDLKGFDGRCDAIYFTTRKDDIPPSDMAALNNFRRAKL CCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC GLLAPPKTESYDLVVIGAGIAGMSTAVSAARLGCKVALINDRPVVGGNNSSEIRVHLGGA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCCCCEEEEEECCE IEIGKYPELGGLQKEFGPVKEGNAQPAGNYEDHKKMEWLQAETNVSLFLNYRAFSVKKEE EEECCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCC DRIISITACHIESGEEIEFYGRLFADCTGDGTIGYLAGADYRMGRESRSEYGETIAPEIA CCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHH DSLVMGTSVQWYSVEDTKTSYFPEFRYGIEFNEETCEPVTYGEWTWETGMNKNQINDSEQ HHHHCCCCEEEEEECCCCCCCCCCEEECEEECCCCCCCCCCCCEEECCCCCCCCCCCHHH IRDYGMLVIYSNWSYLKNQSERRKYYKKRSLEWVAYIAGKRESRRLLGDYVLKEDDLTKH HHHCCEEEEEECCHHHHCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHH VAHEDASFTTTWSIDLHRPDPENTRYFPGREFKATTDHVVIYPYPVPYRCLYSRNIDNLF HHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHE MAGRNISVTHVALGTVRVMRTTGMMGEVVGMAASLCKKYQATPRDIYHYYLEELKSLMQK ECCCCCEEEEEEHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVNKKGLPNNQRYNEGGRLNQIPKVK CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA