| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347859
Identifier: 29347859
GI number: 29347859
Start: 3066484
End: 3066828
Strand: Reverse
Name: 29347859
Synonym: BT_2449
Alternate gene names: NA
Gene position: 3066828-3066484 (Counterclockwise)
Preceding gene: 29347865
Following gene: 29347858
Centisome position: 48.99
GC content: 46.67
Gene sequence:
>345_bases ATGACTATTCCTGCCATCAGTCCGGTCCAGTTTGGCAGGTATCGTTTTTTCTCTTACATTCGCATCAACGAATATTTAAA ATCGATCATATGGAAATATATTACATTGAAGCCGGTATCTTTGACAGGATGCTGGGATGTGTCGAAAGTCTATCGACACG CGTGGACAGGCTGTATGAGAAAAATGCGAATAAAGGGGTTGGTGAGTGACTGGACGGTCAGGATGTCTGCCTGCGCCTTG ACATTTCTTCCCGTACCCTGCAGACCCTTCGTGATACCGGACGGTTGGCGTTCACCCAGGTTCAGCGTAAATTTTATTAC AAACCGGAAGATGTGGAGAGGCTGA
Upstream 100 bases:
>100_bases CACAACGGGCTCATGAGTGACACATTCTTCGGATGGGTATAGCGGATTCAGATACCCCTTTATAAATATCTTTTCATCTC CTGACAATTGCTGACTATCC
Downstream 100 bases:
>100_bases TGACTTATGTCGGTATGAGGCGCAAGGAGAAGGCGGTGAGAGACAGAAGAAAAAGCAATAACTTTTAAAAAAGCAAGAAA TGGAAGGAATTATCGGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTIPAISPVQFGRYRFFSYIRINEYLKSIIWKYITLKPVSLTGCWDVSKVYRHAWTGCMRKMRIKGLVSDWTVRMSACAL TFLPVPCRPFVIPDGWRSPRFSVNFITNRKMWRG
Sequences:
>Translated_114_residues MTIPAISPVQFGRYRFFSYIRINEYLKSIIWKYITLKPVSLTGCWDVSKVYRHAWTGCMRKMRIKGLVSDWTVRMSACAL TFLPVPCRPFVIPDGWRSPRFSVNFITNRKMWRG >Mature_113_residues TIPAISPVQFGRYRFFSYIRINEYLKSIIWKYITLKPVSLTGCWDVSKVYRHAWTGCMRKMRIKGLVSDWTVRMSACALT FLPVPCRPFVIPDGWRSPRFSVNFITNRKMWRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13501; Mature: 13370
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPAISPVQFGRYRFFSYIRINEYLKSIIWKYITLKPVSLTGCWDVSKVYRHAWTGCMR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH KMRIKGLVSDWTVRMSACALTFLPVPCRPFVIPDGWRSPRFSVNFITNRKMWRG HHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure TIPAISPVQFGRYRFFSYIRINEYLKSIIWKYITLKPVSLTGCWDVSKVYRHAWTGCMR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH KMRIKGLVSDWTVRMSACALTFLPVPCRPFVIPDGWRSPRFSVNFITNRKMWRG HHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA