Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347858

Identifier: 29347858

GI number: 29347858

Start: 3066111

End: 3066404

Strand: Reverse

Name: 29347858

Synonym: BT_2448

Alternate gene names: NA

Gene position: 3066404-3066111 (Counterclockwise)

Preceding gene: 29347859

Following gene: 29347855

Centisome position: 48.98

GC content: 46.6

Gene sequence:

>294_bases
ATGGAAGGAATTATCGGTAAGGAGAGTGAGAGTATCCTGCGTTTCTTTATTCTGCTGGAGAATATTCAGGTAAAAATGGA
TCAGCTAATGGAGGGTAACCGCCCGCCTTTTAACGGTGAACGGTTCCTGACTGACAGGGAGTTGTCCGGGCTGTTGAAAA
TCAGTCGCAGATGTCTGCAGGATTATCGTGACCAGGGTCGGCTCCCCTATGTCCAACTGGGTGGAAAGGTGCTGTATAAA
ACGTCGGACATTGAAAAATTATTGGAAGGTAACTATCACAGGGCGCTGATATAA

Upstream 100 bases:

>100_bases
CGGAAGATGTGGAGAGGCTGATGACTTATGTCGGTATGAGGCGCAAGGAGAAGGCGGTGAGAGACAGAAGAAAAAGCAAT
AACTTTTAAAAAAGCAAGAA

Downstream 100 bases:

>100_bases
TATTGCCCTTTTTAGGCTTTAATGGGATGAGTGTTGGGACTGTCAAGGATTCCGACACTCATCCCATTTTTTATCTGGAC
ATTTTTAGCTCTTAACCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MEGIIGKESESILRFFILLENIQVKMDQLMEGNRPPFNGERFLTDRELSGLLKISRRCLQDYRDQGRLPYVQLGGKVLYK
TSDIEKLLEGNYHRALI

Sequences:

>Translated_97_residues
MEGIIGKESESILRFFILLENIQVKMDQLMEGNRPPFNGERFLTDRELSGLLKISRRCLQDYRDQGRLPYVQLGGKVLYK
TSDIEKLLEGNYHRALI
>Mature_97_residues
MEGIIGKESESILRFFILLENIQVKMDQLMEGNRPPFNGERFLTDRELSGLLKISRRCLQDYRDQGRLPYVQLGGKVLYK
TSDIEKLLEGNYHRALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11316; Mature: 11316

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIIGKESESILRFFILLENIQVKMDQLMEGNRPPFNGERFLTDRELSGLLKISRRCLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
DYRDQGRLPYVQLGGKVLYKTSDIEKLLEGNYHRALI
HHHHCCCCCEEEECCEEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEGIIGKESESILRFFILLENIQVKMDQLMEGNRPPFNGERFLTDRELSGLLKISRRCLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
DYRDQGRLPYVQLGGKVLYKTSDIEKLLEGNYHRALI
HHHHCCCCCEEEECCEEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA