Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347839

Identifier: 29347839

GI number: 29347839

Start: 3039512

End: 3040036

Strand: Reverse

Name: 29347839

Synonym: BT_2429

Alternate gene names: NA

Gene position: 3040036-3039512 (Counterclockwise)

Preceding gene: 29347842

Following gene: 29347838

Centisome position: 48.56

GC content: 32.0

Gene sequence:

>525_bases
ATGAAAGAGCGGTCTCCAGTTAAAAAGAATATACTAAAATTGATTCCTTATATAGAAATTATTGCAGGAGTCATTTTTCT
CTGTTTGGAGATTCATGACTATCGTACTTTGTATTCTATGGCCGAAGCTGATGCAATGTATGGGGGACTTGCTGATTTTT
GTAAGTACAAAGAGAATGTATTTTGTCCGGCATTTTTCTGGATAATTGTTATACTGACAGGACTCAGTTATTGGAAAAAT
AAAAAGATATATTGGATTTTAACGCAGGCATTGGTGTTTATGGTCTTTTTTAGAGCTATGTTTCCGTTTTATGCCATTTT
TATAGAGTTAAATCCAGTAGTCTTTTATATTCTTCCACTTTTGTACTCTACAATATTCTTTGTGGTAGAAAGAAAGTTGT
TTAAAATCAAGCAAATAGATTCTGTTGATATTACAGTTAAAACAAAAATCACGGGGATCGGAATAGGTATCTTATGTACT
ATCATTTATTTCCTGCCCTTTTTGACCGTTTTTTGCTTAATATGA

Upstream 100 bases:

>100_bases
TGCTCGGGAATGCCCAATCTTTATTTGCCTGTATCTGATAATTATGTATTTGTTTTTTCAATTAATAAAAACTATATTTG
TTTGAAAAATAATTTGATAC

Downstream 100 bases:

>100_bases
TAGCCGTCTATATTTATTTTTCCACAGTGATTTGATAGCCGTTTTGCTCTCATGCTCTAACAGTTCGTCTGTATGCCTTT
ATTCATCGATGTTTTAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN
KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT
IIYFLPFLTVFCLI

Sequences:

>Translated_174_residues
MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN
KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT
IIYFLPFLTVFCLI
>Mature_174_residues
MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN
KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT
IIYFLPFLTVFCLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20386; Mature: 20386

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
FCPAFFWIIVILTGLSYWKNKKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPL
CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCTIIYFLPFLTVFCLI
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
FCPAFFWIIVILTGLSYWKNKKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPL
CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCTIIYFLPFLTVFCLI
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA