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The map label for this gene is bkdR [H]

Identifier: 29347796

GI number: 29347796

Start: 2974289

End: 2974759

Strand: Reverse

Name: bkdR [H]

Synonym: BT_2386

Alternate gene names: 29347796

Gene position: 2974759-2974289 (Counterclockwise)

Preceding gene: 29347799

Following gene: 29347794

Centisome position: 47.52

GC content: 44.16

Gene sequence:

>471_bases
ATGGATACTTTTGAGAAATTAGATAAAGTGGATTTGCAGATACTCCGTACTTTGCAAGAGAATGCGCGGTTGACGACCAA
AGAGTTGGCTGCGCGGGTCAGTCTTTCATCGACTCCTGTTTTCGAGCGCCTTAAACGTTTGGAGAGTGGGGGATATATAA
AGAAGTATATCGCTGTGCTGGATGCCGAAAAGCTGAATCAGGGTTTTGTGGTCTTTTGCAGTGTCAAGCTAAGGCGGCTG
AACAGGGACATTGCGGCTGAGTTTACCCGAATCATACAGGACATTCCCGAAGTGACCGAATGTTATAATATATCGGGCAG
TTACGATTACTTGCTGAAGATCCATGCTCCTAATATGAAATATTATCAGGAGTTTATTCTGAATGTATTGGGAACCATCG
ATAGCCTGGGTTCGCTGGAAAGTACGTTTGTGATGGCGGAAGTGAAGCACCGATATGGAATACATATTTAG

Upstream 100 bases:

>100_bases
ATAGTGTAAATATAGAAAATAATGCTATTTTTGTATCGTTATACAGAATAAAGCAACTGCTTTATTCTTAAAAATCACCT
GTTAGAAGAATATTTTTCTT

Downstream 100 bases:

>100_bases
TGGGAAGATTGATGTATTTCCTATTTTTGCTACTCCTTGTTTTCGACTCAGGTTTCCGGTGGATTGCCGATAATGTCTCT
GTATAAGCTGCCGTCATGGT

Product: transcription regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDTFEKLDKVDLQILRTLQENARLTTKELAARVSLSSTPVFERLKRLESGGYIKKYIAVLDAEKLNQGFVVFCSVKLRRL
NRDIAAEFTRIIQDIPEVTECYNISGSYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLESTFVMAEVKHRYGIHI

Sequences:

>Translated_156_residues
MDTFEKLDKVDLQILRTLQENARLTTKELAARVSLSSTPVFERLKRLESGGYIKKYIAVLDAEKLNQGFVVFCSVKLRRL
NRDIAAEFTRIIQDIPEVTECYNISGSYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLESTFVMAEVKHRYGIHI
>Mature_156_residues
MDTFEKLDKVDLQILRTLQENARLTTKELAARVSLSSTPVFERLKRLESGGYIKKYIAVLDAEKLNQGFVVFCSVKLRRL
NRDIAAEFTRIIQDIPEVTECYNISGSYDYLLKIHAPNMKYYQEFILNVLGTIDSLGSLESTFVMAEVKHRYGIHI

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=36.8055555555556, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=32.6666666666667, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17955; Mature: 17955

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFEKLDKVDLQILRTLQENARLTTKELAARVSLSSTPVFERLKRLESGGYIKKYIAVL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
DAEKLNQGFVVFCSVKLRRLNRDIAAEFTRIIQDIPEVTECYNISGSYDYLLKIHAPNMK
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
YYQEFILNVLGTIDSLGSLESTFVMAEVKHRYGIHI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTFEKLDKVDLQILRTLQENARLTTKELAARVSLSSTPVFERLKRLESGGYIKKYIAVL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
DAEKLNQGFVVFCSVKLRRLNRDIAAEFTRIIQDIPEVTECYNISGSYDYLLKIHAPNMK
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
YYQEFILNVLGTIDSLGSLESTFVMAEVKHRYGIHI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]