Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347789

Identifier: 29347789

GI number: 29347789

Start: 2966907

End: 2967641

Strand: Reverse

Name: 29347789

Synonym: BT_2379

Alternate gene names: NA

Gene position: 2967641-2966907 (Counterclockwise)

Preceding gene: 29347791

Following gene: 29347788

Centisome position: 47.4

GC content: 39.05

Gene sequence:

>735_bases
ATGTGCAGAATAATCATCTTATTAATTTCATTGATACTATCAGTGCAATGTTTTTCACAAACGGAGTTTACTACTTGTCT
GTTTGACATATCCAGAAACAGAGTGATACCGATAGCGGTTTATCAGCCGCAGAAAGTAAATTCAAAAACGAAAGTTATCA
TATTCAGCCACGGCTATGATGGGAATAAAAACAGTAAGTCGAACCAAACCTATTCCTACCTGACACGTTTTTTTTCACAA
AAAAGTTTTTATGTGATTAGTATACAACATGAATTGTCCGATGATCCTCTTTTAGCGATGGAAGGCGATTTCATGCAGAC
CCGTATGCCGAATTGGGAACGAGGAACTGACAATATACTTTTTACAATTCAGGAATTTAAAAACTTGAAACCACAATTGA
ATTGGAGCGAACTCATCTTGATAGGGCATTCTAATGGAGGTGATATGACAATGCTGTTTGCCACTAAATACCCGCAGCTG
ATCAGTAAGGCTGTATCTATGGACCATCGTAGAATGATCATGCCCAGAACTTTGAAGCCACGTTTGTATACATTGAGAGG
ATGTGACTATGAGGCAGATGCGGGAGTGCTACCTACCGGACAGGAGCAGGAGCACTTCAGAATGAAAGTAGTAAAACTGG
ATGGAGTTACACATAGCAGTATGGGTGAGAATGGAACGGCAGAACAGCATGACCTCATCAATCAATATATCTATAAATTT
CTGACAGAAAGATAA

Upstream 100 bases:

>100_bases
TATGTAATTTTGTAACTCTGAATTAAGAATGCTCTATATGAAACTAAAAGTTTTGACAACAAATCATTGTGTATACAAAA
TAAATATCCGGTGAATCACT

Downstream 100 bases:

>100_bases
CTGAAGTATCATTTCTATTTTATCCGGTGGTTTTAAACCGGAAGCCTGTTTTTCTTGTATGCTTGCTTTGTTATTATAAA
TAAAAACAGACGAATATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MCRIIILLISLILSVQCFSQTEFTTCLFDISRNRVIPIAVYQPQKVNSKTKVIIFSHGYDGNKNSKSNQTYSYLTRFFSQ
KSFYVISIQHELSDDPLLAMEGDFMQTRMPNWERGTDNILFTIQEFKNLKPQLNWSELILIGHSNGGDMTMLFATKYPQL
ISKAVSMDHRRMIMPRTLKPRLYTLRGCDYEADAGVLPTGQEQEHFRMKVVKLDGVTHSSMGENGTAEQHDLINQYIYKF
LTER

Sequences:

>Translated_244_residues
MCRIIILLISLILSVQCFSQTEFTTCLFDISRNRVIPIAVYQPQKVNSKTKVIIFSHGYDGNKNSKSNQTYSYLTRFFSQ
KSFYVISIQHELSDDPLLAMEGDFMQTRMPNWERGTDNILFTIQEFKNLKPQLNWSELILIGHSNGGDMTMLFATKYPQL
ISKAVSMDHRRMIMPRTLKPRLYTLRGCDYEADAGVLPTGQEQEHFRMKVVKLDGVTHSSMGENGTAEQHDLINQYIYKF
LTER
>Mature_244_residues
MCRIIILLISLILSVQCFSQTEFTTCLFDISRNRVIPIAVYQPQKVNSKTKVIIFSHGYDGNKNSKSNQTYSYLTRFFSQ
KSFYVISIQHELSDDPLLAMEGDFMQTRMPNWERGTDNILFTIQEFKNLKPQLNWSELILIGHSNGGDMTMLFATKYPQL
ISKAVSMDHRRMIMPRTLKPRLYTLRGCDYEADAGVLPTGQEQEHFRMKVVKLDGVTHSSMGENGTAEQHDLINQYIYKF
LTER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28241; Mature: 28241

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRIIILLISLILSVQCFSQTEFTTCLFDISRNRVIPIAVYQPQKVNSKTKVIIFSHGYD
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCC
GNKNSKSNQTYSYLTRFFSQKSFYVISIQHELSDDPLLAMEGDFMQTRMPNWERGTDNIL
CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCEE
FTIQEFKNLKPQLNWSELILIGHSNGGDMTMLFATKYPQLISKAVSMDHRRMIMPRTLKP
EEEHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCCC
RLYTLRGCDYEADAGVLPTGQEQEHFRMKVVKLDGVTHSSMGENGTAEQHDLINQYIYKF
CEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LTER
HHCC
>Mature Secondary Structure
MCRIIILLISLILSVQCFSQTEFTTCLFDISRNRVIPIAVYQPQKVNSKTKVIIFSHGYD
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCC
GNKNSKSNQTYSYLTRFFSQKSFYVISIQHELSDDPLLAMEGDFMQTRMPNWERGTDNIL
CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCEE
FTIQEFKNLKPQLNWSELILIGHSNGGDMTMLFATKYPQLISKAVSMDHRRMIMPRTLKP
EEEHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCCC
RLYTLRGCDYEADAGVLPTGQEQEHFRMKVVKLDGVTHSSMGENGTAEQHDLINQYIYKF
CEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LTER
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA