| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347784
Identifier: 29347784
GI number: 29347784
Start: 2960156
End: 2962111
Strand: Reverse
Name: 29347784
Synonym: BT_2374
Alternate gene names: NA
Gene position: 2962111-2960156 (Counterclockwise)
Preceding gene: 29347787
Following gene: 29347783
Centisome position: 47.32
GC content: 45.14
Gene sequence:
>1956_bases ATGAGAAAACAACTATTAGTATCACTCCTCTGCTGCCTTCTTGTTTCGGCTGCGTCATTGGCTCAAAGCTGGAAACCTTA TGAACAGGCTGCGAAGGGGAAGACTTACGAAGCATCCGATTGTGTGACACTGTTGGATAGTACATCGGTATCTGTTCAGC CTACAGGACAAGGGTCGTTTGTTGTATGCAAAGTGATAAAGGTACAGACTCCGAGGGGAGCAGTGGATAATCGGGTGATT AAATACGATTATGACCCTTTGACTGCTTATGCCGAATTTAAACGTGTAACCATCCATCGTGCCAATGGAAAAGTAGATGA ACTTGATGTCAGGAAAACCTGTGATTATGCTGCTCCTGCGCGTGCTATTTATTGGGGCGCAAGACAAATCATGATTGAAG TGGGCGCCTTGCAGCCGGGTGATATTGTGGATTACGAAATAGCCAAGAAAGGCTTTACCTATGCGTTGCTTGCAGCCGGT AATGAAGATGAATCACGCTTTATTCCGCCTATGCGCGGACAGTTTTATGATATTGTTCCTTTTTGGAGCAGCACTCCTAC TGTACGTAAAGTTTATGTAGTAAGCATTCCGATGGAGAAGGAACTTCAGTTTCAGTTCTATCAGGGTGAGTGCGCATCAT CCATGCGTTATGAAGACGGTCGCAAGAAATATAGCTTTGCGATGGATGATATGATGCCTTTCGTTAAAGAGACAAACATG GTAGACCTTTTCGATGCAGCTCCCAAACTGATGATGTCTTCCACTCCCCAGTGGAAAGACAAGTCGTTGTGGTTCAATAA AGTGAATGAAGATTATGGTAGTTTTGATCCATTGCCCGAAGCGCAGAAAAAAGTGGATGAACTGATAAAAGGCAAGAAGA CCGAAATGGAAAAAATAGCTGTGTTGACTCATTGGGTGGCAGATAACATCCGCTATTCCGGCATCTCGATGGGAAAAGGA GAAGGATTTACACTTCATAATACTAAAATGAATTATACTGATCGTTGCGGAGTCTGCAAAGATATAGCAGGTACACTGAT TTCGTTCTTGCGCATGGCTGGTTTCGAAGCCTATCCTGCCATGACGATGGCAGGCAGTCGGGTAGAAAGTATTCCTGCCG ACCATTTTAATCATTGTGTGGCAGTGGTGAAACTGAGCAATGGAACATATATGCCTCTTGATCCGACATGGGTTCCTTTC TGCCGCGAGTTATGGAGCAGTGCCGAACAGCAGCAGAACTATCTGCCGGGTGTACCCGAAGGTTCTGATTTGTGTATCAC TCCGGTTTCGGCTCCCGAAAACCATTATGTACGTATCAAAGCCGACAACCGCTTGGAAGCAGATGGTACACTACGCGGTA CTTTTACCCTTACAGCCGAAGGACAGAGTGACAGCAATATCCGTCGCATCTTTACCACCGGCTTTCAGAGCGAATGGAAA AGCACGATGGAACGTCAGCTGTTGGCCATCTCTCCCAAAGCCAGATTGTTGAGCGTAGACTATGGAAAAAATCCCAAAGA CTATCAGGCTGCACCTATTAAAATCACTTTTCGTTATGAAATACCCGATTATGCCTTGAAAGGAGAGGGCGAGATGTTTT TCCGTCCGATGGTGATGAATAACCTTTATAATCAGGTACGTTCTTATATGTGGATCGATACTTCGGTAGAAAACCGCAAG TATGGTTTCAAAGATGCTTGTTCCCGTTTGGTCGAACTGGATGAAACGGTTCAGCTTCCGGCAGGATACAAGCTGGTGAG TGCGGTCAAGGATGAAACCATGCAAGGAGTGGGAGCCGATTTTGAAGGTTCGTTGGTACAGAAAGGAAATAAAGTGTTGC TCCACAATCGATTGGCTTTGAAGAAGCGTGTTTATGAGGCTTCTGATTGGGAAAGTTTCCGCAATGCTGTGAATGCCCAC AAGGCGTATGGTGAATATTTGGTGATTAAAAAGTAG
Upstream 100 bases:
>100_bases TATTGAGGCAGGAAAAAAGATAATTGCTTTAGCATGAAGTAAATAAATTCCAAAGATTTTACTTACATTTGTTTCTATAA ATAAAATGTAAGTGAAAAAC
Downstream 100 bases:
>100_bases AGCAGAATGAAAAATACATATTATTATATAGTTACGCTGGCGATGTTGATTCTGGCATTTCCGGTGAAAGCGGCATCCGA AGCTGAATTTGGGAAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH KAYGEYLVIKK
Sequences:
>Translated_651_residues MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH KAYGEYLVIKK >Mature_651_residues MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH KAYGEYLVIKK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73574; Mature: 73574
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSF CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHEEECCCCEEEEECCCCCE VVCKVIKVQTPRGAVDNRVIKYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPA EEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCCCCC RAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAGNEDESRFIPPMRGQFYDIVP HHHHHHHEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE FWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM CCCCCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIA EEHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH VLTHWVADNIRYSGISMGKGEGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPA HHHHHHHCCEEECCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC MTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPFCRELWSSAEQQQNYLPGVPE HHHCCCHHHCCCHHHHCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK CCCEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHH STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMN HHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEHHHHHH NLYNQVRSYMWIDTSVENRKYGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGAD HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCHHHEECCCCHHHHHHHHHHHHHCCCCC FEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAHKAYGEYLVIKK CCCHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSF CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHEEECCCCEEEEECCCCCE VVCKVIKVQTPRGAVDNRVIKYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPA EEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCCCCC RAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAGNEDESRFIPPMRGQFYDIVP HHHHHHHEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE FWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM CCCCCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIA EEHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH VLTHWVADNIRYSGISMGKGEGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPA HHHHHHHCCEEECCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC MTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPFCRELWSSAEQQQNYLPGVPE HHHCCCHHHCCCHHHHCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK CCCEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHH STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMN HHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEHHHHHH NLYNQVRSYMWIDTSVENRKYGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGAD HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCHHHEECCCCHHHHHHHHHHHHHCCCCC FEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAHKAYGEYLVIKK CCCHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA