Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347784

Identifier: 29347784

GI number: 29347784

Start: 2960156

End: 2962111

Strand: Reverse

Name: 29347784

Synonym: BT_2374

Alternate gene names: NA

Gene position: 2962111-2960156 (Counterclockwise)

Preceding gene: 29347787

Following gene: 29347783

Centisome position: 47.32

GC content: 45.14

Gene sequence:

>1956_bases
ATGAGAAAACAACTATTAGTATCACTCCTCTGCTGCCTTCTTGTTTCGGCTGCGTCATTGGCTCAAAGCTGGAAACCTTA
TGAACAGGCTGCGAAGGGGAAGACTTACGAAGCATCCGATTGTGTGACACTGTTGGATAGTACATCGGTATCTGTTCAGC
CTACAGGACAAGGGTCGTTTGTTGTATGCAAAGTGATAAAGGTACAGACTCCGAGGGGAGCAGTGGATAATCGGGTGATT
AAATACGATTATGACCCTTTGACTGCTTATGCCGAATTTAAACGTGTAACCATCCATCGTGCCAATGGAAAAGTAGATGA
ACTTGATGTCAGGAAAACCTGTGATTATGCTGCTCCTGCGCGTGCTATTTATTGGGGCGCAAGACAAATCATGATTGAAG
TGGGCGCCTTGCAGCCGGGTGATATTGTGGATTACGAAATAGCCAAGAAAGGCTTTACCTATGCGTTGCTTGCAGCCGGT
AATGAAGATGAATCACGCTTTATTCCGCCTATGCGCGGACAGTTTTATGATATTGTTCCTTTTTGGAGCAGCACTCCTAC
TGTACGTAAAGTTTATGTAGTAAGCATTCCGATGGAGAAGGAACTTCAGTTTCAGTTCTATCAGGGTGAGTGCGCATCAT
CCATGCGTTATGAAGACGGTCGCAAGAAATATAGCTTTGCGATGGATGATATGATGCCTTTCGTTAAAGAGACAAACATG
GTAGACCTTTTCGATGCAGCTCCCAAACTGATGATGTCTTCCACTCCCCAGTGGAAAGACAAGTCGTTGTGGTTCAATAA
AGTGAATGAAGATTATGGTAGTTTTGATCCATTGCCCGAAGCGCAGAAAAAAGTGGATGAACTGATAAAAGGCAAGAAGA
CCGAAATGGAAAAAATAGCTGTGTTGACTCATTGGGTGGCAGATAACATCCGCTATTCCGGCATCTCGATGGGAAAAGGA
GAAGGATTTACACTTCATAATACTAAAATGAATTATACTGATCGTTGCGGAGTCTGCAAAGATATAGCAGGTACACTGAT
TTCGTTCTTGCGCATGGCTGGTTTCGAAGCCTATCCTGCCATGACGATGGCAGGCAGTCGGGTAGAAAGTATTCCTGCCG
ACCATTTTAATCATTGTGTGGCAGTGGTGAAACTGAGCAATGGAACATATATGCCTCTTGATCCGACATGGGTTCCTTTC
TGCCGCGAGTTATGGAGCAGTGCCGAACAGCAGCAGAACTATCTGCCGGGTGTACCCGAAGGTTCTGATTTGTGTATCAC
TCCGGTTTCGGCTCCCGAAAACCATTATGTACGTATCAAAGCCGACAACCGCTTGGAAGCAGATGGTACACTACGCGGTA
CTTTTACCCTTACAGCCGAAGGACAGAGTGACAGCAATATCCGTCGCATCTTTACCACCGGCTTTCAGAGCGAATGGAAA
AGCACGATGGAACGTCAGCTGTTGGCCATCTCTCCCAAAGCCAGATTGTTGAGCGTAGACTATGGAAAAAATCCCAAAGA
CTATCAGGCTGCACCTATTAAAATCACTTTTCGTTATGAAATACCCGATTATGCCTTGAAAGGAGAGGGCGAGATGTTTT
TCCGTCCGATGGTGATGAATAACCTTTATAATCAGGTACGTTCTTATATGTGGATCGATACTTCGGTAGAAAACCGCAAG
TATGGTTTCAAAGATGCTTGTTCCCGTTTGGTCGAACTGGATGAAACGGTTCAGCTTCCGGCAGGATACAAGCTGGTGAG
TGCGGTCAAGGATGAAACCATGCAAGGAGTGGGAGCCGATTTTGAAGGTTCGTTGGTACAGAAAGGAAATAAAGTGTTGC
TCCACAATCGATTGGCTTTGAAGAAGCGTGTTTATGAGGCTTCTGATTGGGAAAGTTTCCGCAATGCTGTGAATGCCCAC
AAGGCGTATGGTGAATATTTGGTGATTAAAAAGTAG

Upstream 100 bases:

>100_bases
TATTGAGGCAGGAAAAAAGATAATTGCTTTAGCATGAAGTAAATAAATTCCAAAGATTTTACTTACATTTGTTTCTATAA
ATAAAATGTAAGTGAAAAAC

Downstream 100 bases:

>100_bases
AGCAGAATGAAAAATACATATTATTATATAGTTACGCTGGCGATGTTGATTCTGGCATTTCCGGTGAAAGCGGCATCCGA
AGCTGAATTTGGGAAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI
KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG
NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM
VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG
EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF
CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK
STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK
YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH
KAYGEYLVIKK

Sequences:

>Translated_651_residues
MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI
KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG
NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM
VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG
EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF
CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK
STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK
YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH
KAYGEYLVIKK
>Mature_651_residues
MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSFVVCKVIKVQTPRGAVDNRVI
KYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPARAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAG
NEDESRFIPPMRGQFYDIVPFWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM
VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIAVLTHWVADNIRYSGISMGKG
EGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPAMTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPF
CRELWSSAEQQQNYLPGVPEGSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK
STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMNNLYNQVRSYMWIDTSVENRK
YGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGADFEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAH
KAYGEYLVIKK

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73574; Mature: 73574

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHEEECCCCEEEEECCCCCE
VVCKVIKVQTPRGAVDNRVIKYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPA
EEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCCCCC
RAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAGNEDESRFIPPMRGQFYDIVP
HHHHHHHEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
FWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM
CCCCCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE
VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIA
EEHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
VLTHWVADNIRYSGISMGKGEGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPA
HHHHHHHCCEEECCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
MTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPFCRELWSSAEQQQNYLPGVPE
HHHCCCHHHCCCHHHHCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK
CCCEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHH
STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMN
HHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEHHHHHH
NLYNQVRSYMWIDTSVENRKYGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGAD
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCHHHEECCCCHHHHHHHHHHHHHCCCCC
FEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAHKAYGEYLVIKK
CCCHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRKQLLVSLLCCLLVSAASLAQSWKPYEQAAKGKTYEASDCVTLLDSTSVSVQPTGQGSF
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHEEECCCCEEEEECCCCCE
VVCKVIKVQTPRGAVDNRVIKYDYDPLTAYAEFKRVTIHRANGKVDELDVRKTCDYAAPA
EEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCCCCC
RAIYWGARQIMIEVGALQPGDIVDYEIAKKGFTYALLAAGNEDESRFIPPMRGQFYDIVP
HHHHHHHEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
FWSSTPTVRKVYVVSIPMEKELQFQFYQGECASSMRYEDGRKKYSFAMDDMMPFVKETNM
CCCCCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE
VDLFDAAPKLMMSSTPQWKDKSLWFNKVNEDYGSFDPLPEAQKKVDELIKGKKTEMEKIA
EEHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
VLTHWVADNIRYSGISMGKGEGFTLHNTKMNYTDRCGVCKDIAGTLISFLRMAGFEAYPA
HHHHHHHCCEEECCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
MTMAGSRVESIPADHFNHCVAVVKLSNGTYMPLDPTWVPFCRELWSSAEQQQNYLPGVPE
HHHCCCHHHCCCHHHHCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GSDLCITPVSAPENHYVRIKADNRLEADGTLRGTFTLTAEGQSDSNIRRIFTTGFQSEWK
CCCEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEEEECCCCCCCCCEEEECCCHHHHH
STMERQLLAISPKARLLSVDYGKNPKDYQAAPIKITFRYEIPDYALKGEGEMFFRPMVMN
HHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEHHHHHH
NLYNQVRSYMWIDTSVENRKYGFKDACSRLVELDETVQLPAGYKLVSAVKDETMQGVGAD
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCHHHEECCCCHHHHHHHHHHHHHCCCCC
FEGSLVQKGNKVLLHNRLALKKRVYEASDWESFRNAVNAHKAYGEYLVIKK
CCCHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA