Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347738

Identifier: 29347738

GI number: 29347738

Start: 2909831

End: 2910562

Strand: Reverse

Name: 29347738

Synonym: BT_2328

Alternate gene names: NA

Gene position: 2910562-2909831 (Counterclockwise)

Preceding gene: 29347739

Following gene: 29347737

Centisome position: 46.49

GC content: 32.51

Gene sequence:

>732_bases
ATGAATAAAGAACAATTTACATTCTATATAGATGAAAGCTGTCATTTAGAACATGATCATTTTCCTGTCATGTGTATTGG
TTATATAAAGGTGCCAAAGGAGCAGACTGAAGAAATGAAACAATGCATAAAAGCGATTAAGCGAGGGCATAATATTTTAC
ATGAGATAAAATGGAATACAATCAGTAACACCCATATTGATATGTATAAAGAACTTATAGATTACTTTTTTGACTCAAAC
ATGGAGTTCAGATGTATTCTTGTTAAGTACAAAGACCGTTTAGACAATTTGTCTTTCAACAACGGCGAGCATGATAATTT
TTACTATAAAATGATTTATTACTTGCTTGTCAATCCATACACTAATCCTTCTGCAATGAATAATTACCGTGTATTTTTGG
ATATAAAAGATACGAAAGGACGTGCAAAACTTAATAAAATCCAAGAGGTCTTCTCTAATAAGTTTCATGGTAAATCGCCT
TTTCTTTCTTTTCAGCATATACGTTCCCATGAATCACAATTTATACAGTTAGCAGATTTTTTCATAGGTGCAGTAACTTA
TAAAGCGAGAGGTCTTCACTTGAAGAAAGATGGCAGCTTGGCAAAAAAAGAACTGATCAACTATATTGAAATGAAATCTG
GTTATGTTTTGGATGAAGGTACAGAACCGGGAGAAATCAAATTTAATATTTTTGATCACCAACCTCGTAAGCGCAATGAC
AGTAGCAGATGA

Upstream 100 bases:

>100_bases
TACTTTATACAATGTAAAGATAGATAAGCAAGTATTACCCGAAGTGAGAAAATGGAGAATTCAGTAATTATAATTGGAAA
GAATAATATATAGCGACCTT

Downstream 100 bases:

>100_bases
ATTAGGAGCTTTAAAACCGTATTTTGCAGACGGGGTTGCAGAAACGGAACAAGAAAAAATGGATGAACTTCATGCCATTT
TTCATCGGGATTTTTTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN
MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP
FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND
SSR

Sequences:

>Translated_243_residues
MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN
MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP
FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND
SSR
>Mature_243_residues
MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN
MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP
FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND
SSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28938; Mature: 28938

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNT
CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
ISNTHIDMYKELIDYFFDSNMEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPY
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCHHHEEEEHHHCCCC
TNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSPFLSFQHIRSHESQFIQLADF
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCC
SSR
CCC
>Mature Secondary Structure
MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNT
CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
ISNTHIDMYKELIDYFFDSNMEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPY
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCHHHEEEEHHHCCCC
TNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSPFLSFQHIRSHESQFIQLADF
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCC
SSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA