| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347603
Identifier: 29347603
GI number: 29347603
Start: 2752866
End: 2754539
Strand: Reverse
Name: 29347603
Synonym: BT_2193
Alternate gene names: NA
Gene position: 2754539-2752866 (Counterclockwise)
Preceding gene: 29347604
Following gene: 29347602
Centisome position: 44.0
GC content: 44.32
Gene sequence:
>1674_bases ATGAAAAAATACATTTATATACTTTTGACGTTCTGTCTGTTAATCTCCTGTATGGAAGATCCGACGGCAGGTGTGGTCGT TCCTAAATATACTCCGTCTACCGAGAATCCGGGAGGTCCGGGTGAAGAACCGGGTGATGGGCTGATAGATCCGGCAGAAC CGCTGGACAGGGGATTTATGCATCTGAAAGGTCGTGAACTGAAATCCCTGAATTCTATTTCCATCACAGGACTGAATGAT GGCGAGAAAGTAATTCTTTCCACTTTGGCAGGGCTTGCGGCAAGAGTGACGGGCGATCAGGTTTATATCAATGAAGGAGG TCCTTCTTCCGTATGGTTGAAGCAGATGCAGAATAAGTACGGAATTCCGGTAAATACTTATAATGCTTTGGCTCCGTTGG TACAGCATTATGTAGAAACCGGAGTGATCAAGGGGTATATTGTCTATACGCCTTATTCGGAAGGACAATCTCATTCGATC AATGTAGCTACTTCTTTATGTGGGTTGCTTCGGGGGATTGCGGTACCGGAATCTCTTGTCGATAAGGTAAAGGCAATGGG AGTGACAACCGAACTTATGGACGTAAGGTCTTATGATGAGAAGTGGTTGTACGAGAATTATAAAGACCAGTTGGACAAGA GTCTTGCAGCCGATATGAAACCGGAAATCTTCCATCACCTGCGCGATTATATCACAATGACCAATGCTTTTGCTTTTTAT GACTACAATGCGCGCAGGGATTGGTCATGGCGTACTTCTATACTGAAAGATCTGGATAAAGGAGCTTATTGTTTCGGTTA TTATGATCTGGATGAATGGGGCATGGTGAATAATGCTTCTCAATTGGGTGTTTCTATGTTGCCGACCGATCAGGCGGCTA ATCTGGCCACGTTGAGTAGTATATATGATACAACAGGACTGAAACAGCGTCCGGCAACTAAAGAAGTGGTTACCGAAGAG AATGTGCACTATGTGACATTCCTCGTCAGTGACGGTGATAATATTGCGTTTAACCTTTGGGGGCAACAAGGATACATGGA TCATGACCTGCACGGTCAATTCCCACTCGGATATACCATTTCACCTTCTCTGTACGATTTGGCTCCGGCTGCTTTACGCT GGTACTATGAGAATAGCAAAGAAGGCGATTACTTTGTAGCGGGTCCGAGTGGCAGCAGCTATATATTCCCGAGTAAGATG TCGGATGCCGACCTGGACGATTATCTGGCTAAGTTGAATGAGTATGTCGATAAGTCAGGCTTGAATATCTGTAATATTCT GGATCAGAAGATTATGGATAATCCGAAAGTTTACAATAAGTATCTGGCTCAGCCTAATATCGATGCGATTTTCTACACAG GATATGGAGAAAAAGGGGATGGAAGAATCAAATTTTCGGATAATGGCAAGCCGGTGATTGAGCAGAGAAGCGTATTATGG GAAGGCATCGACGGTGGCTCGAACAGAGGTGAAGAATCGACTGTCATTTCTCAGATCAATAGCCGCTCTGCCAATCCGCA TAGTGCCGACGGATATACTTTTGTATTTGTACATTGCTGGACAAAGAACCAGCAAAGTATCAAAACCGTCATTGATGGAT TGAATGACAATGTGCGTGTTGTTCCGGTCGATCAATTCGTGCAGCTGGTGAAACAAAATCTGGGTCCTAAATAA
Upstream 100 bases:
>100_bases TCCGTCTGACAATAACTGCCGTGTATAGTGGCAAATGGGCAACAGTGGTAGCAGAGATTAATGCGATTTCTATTATTAAA TAACAGAAAAAACGATTACC
Downstream 100 bases:
>100_bases ACGAATATACTCGTAAGTTATTTATTATGAACATAAAAGTATTAGTTGCATCGGCAGTTGCTGCATTCAGTTCTCTGCCG GTCATAGCTCAACAAGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MKKYIYILLTFCLLISCMEDPTAGVVVPKYTPSTENPGGPGEEPGDGLIDPAEPLDRGFMHLKGRELKSLNSISITGLND GEKVILSTLAGLAARVTGDQVYINEGGPSSVWLKQMQNKYGIPVNTYNALAPLVQHYVETGVIKGYIVYTPYSEGQSHSI NVATSLCGLLRGIAVPESLVDKVKAMGVTTELMDVRSYDEKWLYENYKDQLDKSLAADMKPEIFHHLRDYITMTNAFAFY DYNARRDWSWRTSILKDLDKGAYCFGYYDLDEWGMVNNASQLGVSMLPTDQAANLATLSSIYDTTGLKQRPATKEVVTEE NVHYVTFLVSDGDNIAFNLWGQQGYMDHDLHGQFPLGYTISPSLYDLAPAALRWYYENSKEGDYFVAGPSGSSYIFPSKM SDADLDDYLAKLNEYVDKSGLNICNILDQKIMDNPKVYNKYLAQPNIDAIFYTGYGEKGDGRIKFSDNGKPVIEQRSVLW EGIDGGSNRGEESTVISQINSRSANPHSADGYTFVFVHCWTKNQQSIKTVIDGLNDNVRVVPVDQFVQLVKQNLGPK
Sequences:
>Translated_557_residues MKKYIYILLTFCLLISCMEDPTAGVVVPKYTPSTENPGGPGEEPGDGLIDPAEPLDRGFMHLKGRELKSLNSISITGLND GEKVILSTLAGLAARVTGDQVYINEGGPSSVWLKQMQNKYGIPVNTYNALAPLVQHYVETGVIKGYIVYTPYSEGQSHSI NVATSLCGLLRGIAVPESLVDKVKAMGVTTELMDVRSYDEKWLYENYKDQLDKSLAADMKPEIFHHLRDYITMTNAFAFY DYNARRDWSWRTSILKDLDKGAYCFGYYDLDEWGMVNNASQLGVSMLPTDQAANLATLSSIYDTTGLKQRPATKEVVTEE NVHYVTFLVSDGDNIAFNLWGQQGYMDHDLHGQFPLGYTISPSLYDLAPAALRWYYENSKEGDYFVAGPSGSSYIFPSKM SDADLDDYLAKLNEYVDKSGLNICNILDQKIMDNPKVYNKYLAQPNIDAIFYTGYGEKGDGRIKFSDNGKPVIEQRSVLW EGIDGGSNRGEESTVISQINSRSANPHSADGYTFVFVHCWTKNQQSIKTVIDGLNDNVRVVPVDQFVQLVKQNLGPK >Mature_557_residues MKKYIYILLTFCLLISCMEDPTAGVVVPKYTPSTENPGGPGEEPGDGLIDPAEPLDRGFMHLKGRELKSLNSISITGLND GEKVILSTLAGLAARVTGDQVYINEGGPSSVWLKQMQNKYGIPVNTYNALAPLVQHYVETGVIKGYIVYTPYSEGQSHSI NVATSLCGLLRGIAVPESLVDKVKAMGVTTELMDVRSYDEKWLYENYKDQLDKSLAADMKPEIFHHLRDYITMTNAFAFY DYNARRDWSWRTSILKDLDKGAYCFGYYDLDEWGMVNNASQLGVSMLPTDQAANLATLSSIYDTTGLKQRPATKEVVTEE NVHYVTFLVSDGDNIAFNLWGQQGYMDHDLHGQFPLGYTISPSLYDLAPAALRWYYENSKEGDYFVAGPSGSSYIFPSKM SDADLDDYLAKLNEYVDKSGLNICNILDQKIMDNPKVYNKYLAQPNIDAIFYTGYGEKGDGRIKFSDNGKPVIEQRSVLW EGIDGGSNRGEESTVISQINSRSANPHSADGYTFVFVHCWTKNQQSIKTVIDGLNDNVRVVPVDQFVQLVKQNLGPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62085; Mature: 62085
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01159 WW_DOMAIN_1 ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIYILLTFCLLISCMEDPTAGVVVPKYTPSTENPGGPGEEPGDGLIDPAEPLDRGFM CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHE HLKGRELKSLNSISITGLNDGEKVILSTLAGLAARVTGDQVYINEGGPSSVWLKQMQNKY ECCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHCC GIPVNTYNALAPLVQHYVETGVIKGYIVYTPYSEGQSHSINVATSLCGLLRGIAVPESLV CCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCHHHH DKVKAMGVTTELMDVRSYDEKWLYENYKDQLDKSLAADMKPEIFHHLRDYITMTNAFAFY HHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEE DYNARRDWSWRTSILKDLDKGAYCFGYYDLDEWGMVNNASQLGVSMLPTDQAANLATLSS ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCCEEECCCCCCCCHHHHHH IYDTTGLKQRPATKEVVTEENVHYVTFLVSDGDNIAFNLWGQQGYMDHDLHGQFPLGYTI HHHHCCCCCCCCCHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEE SPSLYDLAPAALRWYYENSKEGDYFVAGPSGSSYIFPSKMSDADLDDYLAKLNEYVDKSG CCHHHHHHHHHHHEEECCCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCC LNICNILDQKIMDNPKVYNKYLAQPNIDAIFYTGYGEKGDGRIKFSDNGKPVIEQRSVLW CHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH EGIDGGSNRGEESTVISQINSRSANPHSADGYTFVFVHCWTKNQQSIKTVIDGLNDNVRV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEE VPVDQFVQLVKQNLGPK EEHHHHHHHHHHHCCCC >Mature Secondary Structure MKKYIYILLTFCLLISCMEDPTAGVVVPKYTPSTENPGGPGEEPGDGLIDPAEPLDRGFM CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHE HLKGRELKSLNSISITGLNDGEKVILSTLAGLAARVTGDQVYINEGGPSSVWLKQMQNKY ECCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHCC GIPVNTYNALAPLVQHYVETGVIKGYIVYTPYSEGQSHSINVATSLCGLLRGIAVPESLV CCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCHHHH DKVKAMGVTTELMDVRSYDEKWLYENYKDQLDKSLAADMKPEIFHHLRDYITMTNAFAFY HHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEE DYNARRDWSWRTSILKDLDKGAYCFGYYDLDEWGMVNNASQLGVSMLPTDQAANLATLSS ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCCEEECCCCCCCCHHHHHH IYDTTGLKQRPATKEVVTEENVHYVTFLVSDGDNIAFNLWGQQGYMDHDLHGQFPLGYTI HHHHCCCCCCCCCHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEE SPSLYDLAPAALRWYYENSKEGDYFVAGPSGSSYIFPSKMSDADLDDYLAKLNEYVDKSG CCHHHHHHHHHHHEEECCCCCCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCC LNICNILDQKIMDNPKVYNKYLAQPNIDAIFYTGYGEKGDGRIKFSDNGKPVIEQRSVLW CHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH EGIDGGSNRGEESTVISQINSRSANPHSADGYTFVFVHCWTKNQQSIKTVIDGLNDNVRV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEE VPVDQFVQLVKQNLGPK EEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA