Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347570

Identifier: 29347570

GI number: 29347570

Start: 2719301

End: 2720986

Strand: Reverse

Name: 29347570

Synonym: BT_2160

Alternate gene names: NA

Gene position: 2720986-2719301 (Counterclockwise)

Preceding gene: 29347571

Following gene: 29347569

Centisome position: 43.46

GC content: 37.96

Gene sequence:

>1686_bases
ATGGATAAATCGCTTTTTTTTATCATCTTTGCTAATAATATGAAATTCAACCGTTGTTATCTGAAGAGAATCGTTTTGCT
GTTCCTGGTTGCTCTGGGAATTGGCAATGCTCTTTATGCAAATAACGAATTGAAAATACTGGCTGACTCTCTGCATAAAA
TGATAGATGCGAAGCCGCTCTTCGTCCAGAAGAAAGAGCAGCGAATCGCTCGGATTAAATGTTTACTGAAGGACTCTGGG
TTGACTCCCGATCGGGAATATAAGGTGAATCTCCAATTATACAATGAGTATAAGAAATTTAATATAGACTCTGCCATCCA
TTATGTCGACCGGAACCTTGAAATCGCTCGTCAGTTAAATAGAAACTATTTGAAATACCAGTCTTCTTTGCAACTCAGCC
TTGTATATTCCATGTGCGGCAGATATAGAGATGCAGAATTACTTCTCGAAAAAATGAAGCCATCAGAATTTCCTCGTTCA
TTATTAGCTACTTATTATGATACATATGCCCGTTTTTGGGAGTATTATTCGATTTCTGCTACCAATAATCAGTACGGAAA
AAAACGGGAAGCCTATCAGGATTCACTGTATGCTCTTATGGATCATACTTCCTTTGACTATAAATTGTCACGGGCTTATT
CTTATGCAGGACACGATTCAACAAAGGCGATCAAGATTTTGGATGAGTTGCTGAATGCTGAGGAGGTAGGCACTCCTAAC
TATGCGATGATTACTCATTCGTATGCCATGCTGAGCCGCTATTTGAAAAGAGAGGATGATGCGAAGAAATATCTTATGAT
GTCCGCCATTGCTGATATTCAGAATGCCACACGCGAAACAGCCTCCCTGCAGGCACTTGCACTGATACAATATGAGGAAA
ATAATTTAGCGGATGCTTTCAAATTTACTCAGTCGGCTATTGATGATGTCGTTTCCTCCGGCATTCATTTCCGGGCAATG
GAAATCTATAAATTCTATTCTATTATTAATACGGCTTATCAGACGGAAGAAGCTAGGTCTAAATCGAATCTGATTACTTT
TCTTATCTCAACCAGCGTTTCTCTTTTTCTTTTAATCGTGTTGGTCGTATTTATTTATATTCAGATGAAAAAAACGTTGC
GGATGAAACGGGCGCTGGCACAAAGTAACGAGGAACTTTTGAGACTGAACGACAAACTGAACAGCATGAATAGTGAGTTG
AATGATAAGAATGATGAACTGTGCGAGATTAATAATATAAAGGAGCATTATATCGCTCAGTTTTTCGACGTGTGCTTCAG
CTATATTCATAAAATGGAGAAGTATCAGAATATGCTGTATAAAATAGCCATTAATAAGTGCTATGAGGAACTGATTAAAA
AGCTGAAATCTTCCGCATTGATTGATGATGAACTTGATGCTCTGTATACTCGCTTCGATAGAGTCTTTCTGAATTTATAT
CCGACTTTTGTTTCAGATTTCAATGCTTTACTGAAAGATGACGAGAAGATCATTCTTAAACAGGACGCTTTGTTGAATAG
GGAACTTCGTATCTATGCGCTGTTACGTTTGGGCATTACGGATAGCGGAAAGATTGCCAATTTCCTTCGTTGCTCTACAA
GTACTGTTTATAATTATCGTACTAAAATGCGTAACAAGGCTGCAGTAGATCGGGATGAATTTGAAAATGAAATTATGAAA
ATCTGA

Upstream 100 bases:

>100_bases
TCGTTAAACTTCACAAGGAAGTTTCTGTAGAAATTCCTTTCGAAGTAGTTGCTGAATAAGAACAAATTTACTTCATATAT
TAAAAAAGCGATTTGTTCTG

Downstream 100 bases:

>100_bases
CCAATATAAACGAATTTGTGCCATTCGATAAATAAAATACTTTCCAAACAATCTACATTTTTTATATCCTTGTGTATATC
TAAAGTGTTGATTTATAATA

Product: putative regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MDKSLFFIIFANNMKFNRCYLKRIVLLFLVALGIGNALYANNELKILADSLHKMIDAKPLFVQKKEQRIARIKCLLKDSG
LTPDREYKVNLQLYNEYKKFNIDSAIHYVDRNLEIARQLNRNYLKYQSSLQLSLVYSMCGRYRDAELLLEKMKPSEFPRS
LLATYYDTYARFWEYYSISATNNQYGKKREAYQDSLYALMDHTSFDYKLSRAYSYAGHDSTKAIKILDELLNAEEVGTPN
YAMITHSYAMLSRYLKREDDAKKYLMMSAIADIQNATRETASLQALALIQYEENNLADAFKFTQSAIDDVVSSGIHFRAM
EIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIVLVVFIYIQMKKTLRMKRALAQSNEELLRLNDKLNSMNSEL
NDKNDELCEINNIKEHYIAQFFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDALYTRFDRVFLNLY
PTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIANFLRCSTSTVYNYRTKMRNKAAVDRDEFENEIMK
I

Sequences:

>Translated_561_residues
MDKSLFFIIFANNMKFNRCYLKRIVLLFLVALGIGNALYANNELKILADSLHKMIDAKPLFVQKKEQRIARIKCLLKDSG
LTPDREYKVNLQLYNEYKKFNIDSAIHYVDRNLEIARQLNRNYLKYQSSLQLSLVYSMCGRYRDAELLLEKMKPSEFPRS
LLATYYDTYARFWEYYSISATNNQYGKKREAYQDSLYALMDHTSFDYKLSRAYSYAGHDSTKAIKILDELLNAEEVGTPN
YAMITHSYAMLSRYLKREDDAKKYLMMSAIADIQNATRETASLQALALIQYEENNLADAFKFTQSAIDDVVSSGIHFRAM
EIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIVLVVFIYIQMKKTLRMKRALAQSNEELLRLNDKLNSMNSEL
NDKNDELCEINNIKEHYIAQFFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDALYTRFDRVFLNLY
PTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIANFLRCSTSTVYNYRTKMRNKAAVDRDEFENEIMK
I
>Mature_561_residues
MDKSLFFIIFANNMKFNRCYLKRIVLLFLVALGIGNALYANNELKILADSLHKMIDAKPLFVQKKEQRIARIKCLLKDSG
LTPDREYKVNLQLYNEYKKFNIDSAIHYVDRNLEIARQLNRNYLKYQSSLQLSLVYSMCGRYRDAELLLEKMKPSEFPRS
LLATYYDTYARFWEYYSISATNNQYGKKREAYQDSLYALMDHTSFDYKLSRAYSYAGHDSTKAIKILDELLNAEEVGTPN
YAMITHSYAMLSRYLKREDDAKKYLMMSAIADIQNATRETASLQALALIQYEENNLADAFKFTQSAIDDVVSSGIHFRAM
EIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIVLVVFIYIQMKKTLRMKRALAQSNEELLRLNDKLNSMNSEL
NDKNDELCEINNIKEHYIAQFFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDALYTRFDRVFLNLY
PTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIANFLRCSTSTVYNYRTKMRNKAAVDRDEFENEIMK
I

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65723; Mature: 65723

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSLFFIIFANNMKFNRCYLKRIVLLFLVALGIGNALYANNELKILADSLHKMIDAKPL
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCH
FVQKKEQRIARIKCLLKDSGLTPDREYKVNLQLYNEYKKFNIDSAIHYVDRNLEIARQLN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHCCHHHHHHHHHCCHHHHHHHH
RNYLKYQSSLQLSLVYSMCGRYRDAELLLEKMKPSEFPRSLLATYYDTYARFWEYYSISA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEC
TNNQYGKKREAYQDSLYALMDHTSFDYKLSRAYSYAGHDSTKAIKILDELLNAEEVGTPN
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCHHHCCCCC
YAMITHSYAMLSRYLKREDDAKKYLMMSAIADIQNATRETASLQALALIQYEENNLADAF
EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
KFTQSAIDDVVSSGIHFRAMEIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LVVFIYIQMKKTLRMKRALAQSNEELLRLNDKLNSMNSELNDKNDELCEINNIKEHYIAQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHH
FFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDALYTRFDRVFLNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
PTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIANFLRCSTSTVYNYR
HHHHHHHHHHHCCCCCEEEEHHHHHCCCHHEEEHHHHCCCCCCCHHHHHHHCCHHHHHHH
TKMRNKAAVDRDEFENEIMKI
HHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MDKSLFFIIFANNMKFNRCYLKRIVLLFLVALGIGNALYANNELKILADSLHKMIDAKPL
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCH
FVQKKEQRIARIKCLLKDSGLTPDREYKVNLQLYNEYKKFNIDSAIHYVDRNLEIARQLN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHCCHHHHHHHHHCCHHHHHHHH
RNYLKYQSSLQLSLVYSMCGRYRDAELLLEKMKPSEFPRSLLATYYDTYARFWEYYSISA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEC
TNNQYGKKREAYQDSLYALMDHTSFDYKLSRAYSYAGHDSTKAIKILDELLNAEEVGTPN
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCHHHCCCCC
YAMITHSYAMLSRYLKREDDAKKYLMMSAIADIQNATRETASLQALALIQYEENNLADAF
EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
KFTQSAIDDVVSSGIHFRAMEIYKFYSIINTAYQTEEARSKSNLITFLISTSVSLFLLIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LVVFIYIQMKKTLRMKRALAQSNEELLRLNDKLNSMNSELNDKNDELCEINNIKEHYIAQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHH
FFDVCFSYIHKMEKYQNMLYKIAINKCYEELIKKLKSSALIDDELDALYTRFDRVFLNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
PTFVSDFNALLKDDEKIILKQDALLNRELRIYALLRLGITDSGKIANFLRCSTSTVYNYR
HHHHHHHHHHHCCCCCEEEEHHHHHCCCHHEEEHHHHCCCCCCCHHHHHHHCCHHHHHHH
TKMRNKAAVDRDEFENEIMKI
HHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA