| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is mutA [H]
Identifier: 29347501
GI number: 29347501
Start: 2620284
End: 2622185
Strand: Reverse
Name: mutA [H]
Synonym: BT_2091
Alternate gene names: 29347501
Gene position: 2622185-2620284 (Counterclockwise)
Preceding gene: 29347503
Following gene: 29347500
Centisome position: 41.89
GC content: 46.48
Gene sequence:
>1902_bases ATGGCAGACAAAAAAGAAAAACTCTTCTCAGACTTTTCTCCTGTCTCCACCGAACAATGGATGGAGAAGGTTACAGCCGA CTTGAAAGGTGCTGATTTTGAGAAGAAGCTCGTTTGGAAGACAAACGAAGGGTTCAAAGTGAAACCTTTCTACCGGATGG AAGATCTGGAGGGTTTGAAAACAACAGATGCACTTCCCGGAGAATTTCCCTATCTGAGAGGCACCAAGAAGAGCAATAAT GAGTGGCTGGTTCGCCAGGAAATCAAAGTTGAATGTCCGAAGGAAGCCAATGCCAAAGCACTGGATATTCTGAACAAAGG TGTGGATTCACTTTCTTTCCACGTAAAAGCGAAAGAACTCAATGCGGAATACATTGAAACACTGTTGAATGGTATTCAGG CTGAGTGTGTAGAACTGAACTTCTCTACTTGTCAGGGACATGTGGTTGAATTGGCTGGTCTGCTGGTGGCTTATTTCCAG AAGAAGGATTATGACGTGAAGAAACTGAGAGGTTCTGTCAATTATGACTTCTTTAACAAGATGCTGACTCGCGGTAAAGA AAAAGGCGATATGGTTCAAACTGCCAAAGCCCTGATCGAAGCTATCCAACCGCTTCCTTTCTATCGTGTACTGAATGTAA ATGCAATCTCGCTGAACAATGCCGGAGCTTACATTTCTCAGGAATTGGGCTATGCATTGGCATGGGGTAATGAATACATG AACCAGCTGACAGACGCAGGTATCCCTGCTGCTACAGTTGCCAAGAAAATTAAGTTCAACTTCGGTATCAGTTCCAACTA CTTCCTTGAAATCGCTAAATTCCGTGCAGCACGTATGCTGTGGGCAAACATCGTAGCTTCCTACCATCCTGAATGCCTGC GTGATTGCGACAATAAGGGGGCTAATGGAGAATGTCGTTGTGCTGCGAAGATGGCGGTTCATGCCGAAACTTCCACTTTC AATCTTACTTTGTTTGATGCTCATGTGAACTTGCTTCGTACACAGACTGAAGCGATGAGTGCTGCATTGGCCGGTGTGGA TTCAATGACAGTCGTTCCGTTCGATAAGACTTATTCGACTCCGGATGAATTCTCTGAACGCCTTGCACGTAACCAGCAGT TGTTACTGAAAGAAGAATCTCATTTTGATAAGGTGATTGACCCGGCTGCCGGTTCTTATTATATCGAGAATCTGACAGTG TCTATCGCTAAACAGGCGTGGGAACTCTTCCTTGCCGTAGAAGAGGCAGGCGGTTTCTATGCTGCATTGAAAGCCGGTAC AGTTCAGGCAGCAGTGAACGAAAGCAACAAGGCCCGTCATAAAGCAGTTGCTCAACGTCGTGAAGTGCTGCTGGGTACCA ACCAGTTCCCGAACTTCAATGAAAAAGCAGGTGAGAAACAGCCGATAGAAGCAAAATGCTGCTGCGGAGGTGATGCTCAT ACTTGCGAGAAAGATGTGGATACTTTGGTATTCGACCGTGCAGCCAGCGAATTTGAGGCATTACGCCTTGAAACGGAGGC TTCCGGCAAACGTCCGAAAGCGTTCATGCTGACTATCGGTAATCTGGCTATGCGTCAGGCACGTGCGCAATACTCTTGCA ACTTCCTCGCTTGTGCCGGATATGAAGTTATTGACAATCTCGGATTCGAAACGGTGGAAGCCGGAGTAGAAGCTGCTATG GCTGCTAAAGCTGACATTGTAGTTCTCTGTTCAAGCGATGACGAATATGCGGAATATGCGGTGCCGGCTTTCAAAGCATT GGACGGCCGTGCTATGTTTATCGTAGCAGGTGCTCCCGCCTGTATGGATGAACTGAAGGCAGCAGGTATCGAGAACTTCA TCCACGTGCGTGTCAACGTATTGGATACCTTGAAAGAGTTTAACGCCAAACTATTGAAGTAA
Upstream 100 bases:
>100_bases GAACTTATTAATTATATTTGCAAGTCGAACGACTGACATTTAGAAAGAGACAAATAAAAATAAAGACAATATTAATTCTT GTTTTAATTTTAAATAAACT
Downstream 100 bases:
>100_bases GATGAGAAAAGATTTTAAAAACTTAGATATATATGCTGCATTTCAGCCCGCTAACGGTGCTGAATGGCAAAAGGCTAACG GTATTTCCGCTGATTGGAAT
Product: methylmalonyl-CoA mutase small subunit
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MADKKEKLFSDFSPVSTEQWMEKVTADLKGADFEKKLVWKTNEGFKVKPFYRMEDLEGLKTTDALPGEFPYLRGTKKSNN EWLVRQEIKVECPKEANAKALDILNKGVDSLSFHVKAKELNAEYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQ KKDYDVKKLRGSVNYDFFNKMLTRGKEKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYISQELGYALAWGNEYM NQLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIVASYHPECLRDCDNKGANGECRCAAKMAVHAETSTF NLTLFDAHVNLLRTQTEAMSAALAGVDSMTVVPFDKTYSTPDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTV SIAKQAWELFLAVEEAGGFYAALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQFPNFNEKAGEKQPIEAKCCCGGDAH TCEKDVDTLVFDRAASEFEALRLETEASGKRPKAFMLTIGNLAMRQARAQYSCNFLACAGYEVIDNLGFETVEAGVEAAM AAKADIVVLCSSDDEYAEYAVPAFKALDGRAMFIVAGAPACMDELKAAGIENFIHVRVNVLDTLKEFNAKLLK
Sequences:
>Translated_633_residues MADKKEKLFSDFSPVSTEQWMEKVTADLKGADFEKKLVWKTNEGFKVKPFYRMEDLEGLKTTDALPGEFPYLRGTKKSNN EWLVRQEIKVECPKEANAKALDILNKGVDSLSFHVKAKELNAEYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQ KKDYDVKKLRGSVNYDFFNKMLTRGKEKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYISQELGYALAWGNEYM NQLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIVASYHPECLRDCDNKGANGECRCAAKMAVHAETSTF NLTLFDAHVNLLRTQTEAMSAALAGVDSMTVVPFDKTYSTPDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTV SIAKQAWELFLAVEEAGGFYAALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQFPNFNEKAGEKQPIEAKCCCGGDAH TCEKDVDTLVFDRAASEFEALRLETEASGKRPKAFMLTIGNLAMRQARAQYSCNFLACAGYEVIDNLGFETVEAGVEAAM AAKADIVVLCSSDDEYAEYAVPAFKALDGRAMFIVAGAPACMDELKAAGIENFIHVRVNVLDTLKEFNAKLLK >Mature_632_residues ADKKEKLFSDFSPVSTEQWMEKVTADLKGADFEKKLVWKTNEGFKVKPFYRMEDLEGLKTTDALPGEFPYLRGTKKSNNE WLVRQEIKVECPKEANAKALDILNKGVDSLSFHVKAKELNAEYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQK KDYDVKKLRGSVNYDFFNKMLTRGKEKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYISQELGYALAWGNEYMN QLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIVASYHPECLRDCDNKGANGECRCAAKMAVHAETSTFN LTLFDAHVNLLRTQTEAMSAALAGVDSMTVVPFDKTYSTPDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTVS IAKQAWELFLAVEEAGGFYAALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQFPNFNEKAGEKQPIEAKCCCGGDAHT CEKDVDTLVFDRAASEFEALRLETEASGKRPKAFMLTIGNLAMRQARAQYSCNFLACAGYEVIDNLGFETVEAGVEAAMA AKADIVVLCSSDDEYAEYAVPAFKALDGRAMFIVAGAPACMDELKAAGIENFIHVRVNVLDTLKEFNAKLLK
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=482, Percent_Identity=27.5933609958506, Blast_Score=176, Evalue=8e-44, Organism=Escherichia coli, GI1789284, Length=449, Percent_Identity=29.6213808463252, Blast_Score=201, Evalue=1e-52, Organism=Caenorhabditis elegans, GI25144500, Length=475, Percent_Identity=26.5263157894737, Blast_Score=180, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 70108; Mature: 69976
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKKEKLFSDFSPVSTEQWMEKVTADLKGADFEKKLVWKTNEGFKVKPFYRMEDLEGLK CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCEECHHHCCCCC TTDALPGEFPYLRGTKKSNNEWLVRQEIKVECPKEANAKALDILNKGVDSLSFHVKAKEL CCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHCCCCCEEEEEEHHHC NAEYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQKKDYDVKKLRGSVNYDFFNK CHHHHHHHHHCCCEEEEEEECHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHH MLTRGKEKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYISQELGYALAWGNEYM HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHCCEEEEECHHHH NQLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIVASYHPECLRDCDNKG HHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC ANGECRCAAKMAVHAETSTFNLTLFDAHVNLLRTQTEAMSAALAGVDSMTVVPFDKTYST CCCCEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTVSIAKQAWELFLAVEEAGGFY HHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEEEECCCCEE AALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQFPNFNEKAGEKQPIEAKCCCGGDAH EEEECCEEEEHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCCC TCEKDVDTLVFDRAASEFEALRLETEASGKRPKAFMLTIGNLAMRQARAQYSCNFLACAG CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECC YEVIDNLGFETVEAGVEAAMAAKADIVVLCSSDDEYAEYAVPAFKALDGRAMFIVAGAPA HHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCHH CMDELKAAGIENFIHVRVNVLDTLKEFNAKLLK HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure ADKKEKLFSDFSPVSTEQWMEKVTADLKGADFEKKLVWKTNEGFKVKPFYRMEDLEGLK CCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCEECHHHCCCCC TTDALPGEFPYLRGTKKSNNEWLVRQEIKVECPKEANAKALDILNKGVDSLSFHVKAKEL CCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHCCCCCEEEEEEHHHC NAEYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQKKDYDVKKLRGSVNYDFFNK CHHHHHHHHHCCCEEEEEEECHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHH MLTRGKEKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYISQELGYALAWGNEYM HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHCCEEEEECHHHH NQLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIVASYHPECLRDCDNKG HHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC ANGECRCAAKMAVHAETSTFNLTLFDAHVNLLRTQTEAMSAALAGVDSMTVVPFDKTYST CCCCEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTVSIAKQAWELFLAVEEAGGFY HHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEEEECCCCEE AALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQFPNFNEKAGEKQPIEAKCCCGGDAH EEEECCEEEEHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCCC TCEKDVDTLVFDRAASEFEALRLETEASGKRPKAFMLTIGNLAMRQARAQYSCNFLACAG CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECC YEVIDNLGFETVEAGVEAAMAAKADIVVLCSSDDEYAEYAVPAFKALDGRAMFIVAGAPA HHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCHH CMDELKAAGIENFIHVRVNVLDTLKEFNAKLLK HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]