| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347462
Identifier: 29347462
GI number: 29347462
Start: 2573038
End: 2573475
Strand: Reverse
Name: 29347462
Synonym: BT_2052
Alternate gene names: NA
Gene position: 2573475-2573038 (Counterclockwise)
Preceding gene: 29347463
Following gene: 29347459
Centisome position: 41.11
GC content: 39.73
Gene sequence:
>438_bases ATGCCGGCATTGAATACTTCTTCGTTGCCTGACCTTATCTTTACTTTGTTGTTCTTCTTTATGATTGTAACAACAATGCG CGAGGTAACATTAAAGGTACAGTTTACACTTCCGGTAGGTACTGAACTCGAAAAACTGGAGAAGAAATCGCTGGTAACAT TCATTTATGTGGGTGAACCGACTCAGGAATATCGTGCGAAAATGGGTACTGAAAGTCGTATTCAGCTCAACGACAGCTAT GCTGAAGTTGGCGAAGTACAAGACTTCATTTTCCAGGAACGTGCAAGTATGAATGAGGGTGACCAAGCTAAGATGACTGT GTCTCTGAAAGTAGACCAAAAGACTAAAATGGGTATTATCACAGACGTGAAGAATGCTCTTAGAAAATCTTACGCTTTGA AGATTAACTATTCTTCTACTAAACGTGGTGAGAAATAA
Upstream 100 bases:
>100_bases TGAAATCTATCCGCAGAGAATTTCTGAGGCAGAACCTAAAAAATACGGAGAAAAAAGGAAGTAAGTAATGGGAAAATTTA ATAAAACTGGTAAACGTGAA
Downstream 100 bases:
>100_bases TTAGTTAATTGATATATAGAGAAGGGCGTCCAAGCAATTGGACGCCCTTTCTTTTTAGCTTCTCTTTTAGCTTCTCTGTT TATTATTCTTCGGCAGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPALNTSSLPDLIFTLLFFFMIVTTMREVTLKVQFTLPVGTELEKLEKKSLVTFIYVGEPTQEYRAKMGTESRIQLNDSY AEVGEVQDFIFQERASMNEGDQAKMTVSLKVDQKTKMGIITDVKNALRKSYALKINYSSTKRGEK
Sequences:
>Translated_145_residues MPALNTSSLPDLIFTLLFFFMIVTTMREVTLKVQFTLPVGTELEKLEKKSLVTFIYVGEPTQEYRAKMGTESRIQLNDSY AEVGEVQDFIFQERASMNEGDQAKMTVSLKVDQKTKMGIITDVKNALRKSYALKINYSSTKRGEK >Mature_144_residues PALNTSSLPDLIFTLLFFFMIVTTMREVTLKVQFTLPVGTELEKLEKKSLVTFIYVGEPTQEYRAKMGTESRIQLNDSYA EVGEVQDFIFQERASMNEGDQAKMTVSLKVDQKTKMGIITDVKNALRKSYALKINYSSTKRGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16520; Mature: 16389
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALNTSSLPDLIFTLLFFFMIVTTMREVTLKVQFTLPVGTELEKLEKKSLVTFIYVGEP CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCEEEEEEECCC TQEYRAKMGTESRIQLNDSYAEVGEVQDFIFQERASMNEGDQAKMTVSLKVDQKTKMGII HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHH TDVKNALRKSYALKINYSSTKRGEK HHHHHHHHHHEEEEEECCCCCCCCC >Mature Secondary Structure PALNTSSLPDLIFTLLFFFMIVTTMREVTLKVQFTLPVGTELEKLEKKSLVTFIYVGEP CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCEEEEEEECCC TQEYRAKMGTESRIQLNDSYAEVGEVQDFIFQERASMNEGDQAKMTVSLKVDQKTKMGII HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHH TDVKNALRKSYALKINYSSTKRGEK HHHHHHHHHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA