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The map label for this gene is asnC [H]

Identifier: 29347459

GI number: 29347459

Start: 2570231

End: 2570710

Strand: Reverse

Name: asnC [H]

Synonym: BT_2049

Alternate gene names: 29347459

Gene position: 2570710-2570231 (Counterclockwise)

Preceding gene: 29347462

Following gene: 29347455

Centisome position: 41.06

GC content: 40.62

Gene sequence:

>480_bases
ATGGGACATCATCAATTAGATGCTTTAGATGAGCAAATTCTGAAATTAATAGCAGGGAACGCGCGTATTCCTTTTTTGGA
AGTAGCAAGAGCGTGTAACGTTTCCGGGGCGGCTATCCACCAGCGCATTCAGAAGTTGACTAATCTGGGAATATTGAAAG
GATCGGAATATGTGATCGATCCTGAGAAGATAGGATATGAAACTTGTGCTTATATTGGTATATATCTGAAAGATCCGGAA
TCCTTTGATTCTGTAACGAGAGCTTTGGAAGCCATTCCGGAAGTAGTAGAGTGTCATTTCACTACTGGTAAATATGATAT
GTTTATCAAGATTTACGCTAAGAACAATCACCATTTGCTGAGTATCATACATGATAAATTGCAACCTTTGGGGTTGGCGC
GTACGGAGACATTGATCTCTTTCCATGAAGCCATAAAGCGGCAGATGCCGATTATGGTCGACATTGAAGACGAAGATTAA

Upstream 100 bases:

>100_bases
TCGATATTTGCAAATAAAAGTAATAAATCATAGTATTTGTTGCCGAAAAATAGCTAACTTTGCATGAAAGATTCATTGAT
TAAAACAATTTGATTCAAAA

Downstream 100 bases:

>100_bases
TCGTACAGAATAAAATAGCTTACTGTTTCACGTAATCTACAAAAGCATACGGGCAGAGATGTTTCTCATCCACAGGATGA
GCTTCTCTGCTTTTTTCGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGHHQLDALDEQILKLIAGNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGIYLKDPE
SFDSVTRALEAIPEVVECHFTTGKYDMFIKIYAKNNHHLLSIIHDKLQPLGLARTETLISFHEAIKRQMPIMVDIEDED

Sequences:

>Translated_159_residues
MGHHQLDALDEQILKLIAGNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGIYLKDPE
SFDSVTRALEAIPEVVECHFTTGKYDMFIKIYAKNNHHLLSIIHDKLQPLGLARTETLISFHEAIKRQMPIMVDIEDED
>Mature_158_residues
GHHQLDALDEQILKLIAGNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVIDPEKIGYETCAYIGIYLKDPES
FDSVTRALEAIPEVVECHFTTGKYDMFIKIYAKNNHHLLSIIHDKLQPLGLARTETLISFHEAIKRQMPIMVDIEDED

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=150, Percent_Identity=34.6666666666667, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17957; Mature: 17826

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHHQLDALDEQILKLIAGNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVID
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEC
PEKIGYETCAYIGIYLKDPESFDSVTRALEAIPEVVECHFTTGKYDMFIKIYAKNNHHLL
HHHHCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
SIIHDKLQPLGLARTETLISFHEAIKRQMPIMVDIEDED
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure 
GHHQLDALDEQILKLIAGNARIPFLEVARACNVSGAAIHQRIQKLTNLGILKGSEYVID
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEC
PEKIGYETCAYIGIYLKDPESFDSVTRALEAIPEVVECHFTTGKYDMFIKIYAKNNHHLL
HHHHCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
SIIHDKLQPLGLARTETLISFHEAIKRQMPIMVDIEDED
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]