| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347356
Identifier: 29347356
GI number: 29347356
Start: 2446767
End: 2447153
Strand: Reverse
Name: 29347356
Synonym: BT_1946
Alternate gene names: NA
Gene position: 2447153-2446767 (Counterclockwise)
Preceding gene: 29347357
Following gene: 29347355
Centisome position: 39.09
GC content: 58.91
Gene sequence:
>387_bases ATGACAGGAAAGAACGTAAAAGAGCGGATTGGTCTTGGCGGGATGGACGCGGACCGCATCCGTGAGATCATGGGGGAAGC GCCTGCCTGTCCCCGGAAGAGACGTGGAACGTCCGGTAACGACATTATACGTCCCGCAAGGAAAAATGGCCCCATGCAAC CGTCCGTCTACGGGGAGGAATACCTGCATGGCATTGCGGGCGTGCAGCGTCGGTCGCTGCATATTCCCGCCGCCCTGCAC CGGAAACTGTCCATCCTGGCGGGAGCCTCGAGAAACGGAAAGGTCACTCTGGAGGGGTTCATCAACCACCTTGTCTCGCG GCATCTGGAAGAATACAGGGAAACGACGGACATGATTCTGGAGGAGTCCCTGCCCGGCCGGTCATAA
Upstream 100 bases:
>100_bases CCTCCCTGCTCGGTGAGGTCTACCGTCCCTGGGATGAGGACGGACAGCCGGGAGGAACACCTCGCCGATAAAACGTTGTC ATTGTCCAAGAAGGCATATC
Downstream 100 bases:
>100_bases AGGCTCGTCCCCCATGACAGGGGATCTCCCCCGATGGGAGCATTATTTTTGTTTCTGAAACAATAGTGTTTAACTTTTAA TGAAAAAGAAGTATGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTGKNVKERIGLGGMDADRIREIMGEAPACPRKRRGTSGNDIIRPARKNGPMQPSVYGEEYLHGIAGVQRRSLHIPAALH RKLSILAGASRNGKVTLEGFINHLVSRHLEEYRETTDMILEESLPGRS
Sequences:
>Translated_128_residues MTGKNVKERIGLGGMDADRIREIMGEAPACPRKRRGTSGNDIIRPARKNGPMQPSVYGEEYLHGIAGVQRRSLHIPAALH RKLSILAGASRNGKVTLEGFINHLVSRHLEEYRETTDMILEESLPGRS >Mature_127_residues TGKNVKERIGLGGMDADRIREIMGEAPACPRKRRGTSGNDIIRPARKNGPMQPSVYGEEYLHGIAGVQRRSLHIPAALHR KLSILAGASRNGKVTLEGFINHLVSRHLEEYRETTDMILEESLPGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14169; Mature: 14037
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKNVKERIGLGGMDADRIREIMGEAPACPRKRRGTSGNDIIRPARKNGPMQPSVYGEE CCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHH YLHGIAGVQRRSLHIPAALHRKLSILAGASRNGKVTLEGFINHLVSRHLEEYRETTDMIL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH EESLPGRS HHCCCCCC >Mature Secondary Structure TGKNVKERIGLGGMDADRIREIMGEAPACPRKRRGTSGNDIIRPARKNGPMQPSVYGEE CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHH YLHGIAGVQRRSLHIPAALHRKLSILAGASRNGKVTLEGFINHLVSRHLEEYRETTDMIL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH EESLPGRS HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA