| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347318
Identifier: 29347318
GI number: 29347318
Start: 2397327
End: 2398196
Strand: Reverse
Name: 29347318
Synonym: BT_1908
Alternate gene names: NA
Gene position: 2398196-2397327 (Counterclockwise)
Preceding gene: 29347322
Following gene: 29347316
Centisome position: 38.31
GC content: 42.41
Gene sequence:
>870_bases ATGAAAAAGAAATTTTTATTGTTTGGAGCACTGGTCGGTGCTTTGCTGTTGTCTTCCTGTTCGGGGGGAAGTAAAAAGCA GACTGTATCCTCGGAAAGTACGGAGGAATTGGATGATGCCAGTAAGGTGATCAATTATTATCATATGTCGCTCGCTGTAT TGAGGCATGTGGCTAATGCGAAAGATATAAATGCTGTGTTGGGATACATGGAACAGACAGGGAAAGTGCCTGAAGTTGAC CCGATTGCACCTCCGGAAATAGCTGCCCGTGATACAGCGGAATTGTTGGACCCGGGAGACTATTTTAATCCTGAAGTCCG TCAGAATCTAAAGCAGAATTATGCCGGATTGTTTAATGTGCGGACACAGTTCTATGATAACTTCAATAAATTTCTAGCTT ATAAGAAGTCGAAAGATACAGCAAAAACGGCTCAGCTTTTGGATGAAAACTATAAGTTGAGCGTAGAACTGTCCGAGTAT AAGCAAGTGATTTTTGATATCCTAAGTCCTTTGACCGAACAAGCGGAGAGTGAACTTTTGGCTGATGAGCCGTTGAAAGA TCAGATAATGGCGATGCGCAAGATGTCAGGCACGGTGCAGAGCATAATGAATTTGTATTCCCGCAAACATGCAATGGACG GAGTACGGATTGATTTGAAAATGGCGGAGTTGGAGAAGGAACTGAAGGCTGCGGAAAAAATTCCGGCTGTTACAGGTTAT GATGAAGAACTGAAGAATTTTCAGAGCTTCCTTTCTACCGTTAAGTCCTTTATGAATGATATGCAGAAGGCAAGAAGTAA AGGTGCATATTCGGACAAAGAATATCAGGCGATGTCAGAAGCCTATGAATACGGGCTTTCTGTTATTTGA
Upstream 100 bases:
>100_bases TTTTCCACCGTTGTAAGTGTATGTGATACCTATTGTTTGTACATAACAAAAATCGTTTTTTATTGTTATAGTACGGAAAG TAACTAATAAGGAGAACATT
Downstream 100 bases:
>100_bases AAAATAAGACCCCTTGCCTGGCTATTATATTATACCCAGGCGAGGCATATTTTATGTTTTGTCGTTATTGATAATATCTG TCGATCCTTTTAATAACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKKKFLLFGALVGALLLSSCSGGSKKQTVSSESTEELDDASKVINYYHMSLAVLRHVANAKDINAVLGYMEQTGKVPEVD PIAPPEIAARDTAELLDPGDYFNPEVRQNLKQNYAGLFNVRTQFYDNFNKFLAYKKSKDTAKTAQLLDENYKLSVELSEY KQVIFDILSPLTEQAESELLADEPLKDQIMAMRKMSGTVQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGY DEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQAMSEAYEYGLSVI
Sequences:
>Translated_289_residues MKKKFLLFGALVGALLLSSCSGGSKKQTVSSESTEELDDASKVINYYHMSLAVLRHVANAKDINAVLGYMEQTGKVPEVD PIAPPEIAARDTAELLDPGDYFNPEVRQNLKQNYAGLFNVRTQFYDNFNKFLAYKKSKDTAKTAQLLDENYKLSVELSEY KQVIFDILSPLTEQAESELLADEPLKDQIMAMRKMSGTVQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGY DEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQAMSEAYEYGLSVI >Mature_289_residues MKKKFLLFGALVGALLLSSCSGGSKKQTVSSESTEELDDASKVINYYHMSLAVLRHVANAKDINAVLGYMEQTGKVPEVD PIAPPEIAARDTAELLDPGDYFNPEVRQNLKQNYAGLFNVRTQFYDNFNKFLAYKKSKDTAKTAQLLDENYKLSVELSEY KQVIFDILSPLTEQAESELLADEPLKDQIMAMRKMSGTVQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGY DEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQAMSEAYEYGLSVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32506; Mature: 32506
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFLLFGALVGALLLSSCSGGSKKQTVSSESTEELDDASKVINYYHMSLAVLRHVANA CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC KDINAVLGYMEQTGKVPEVDPIAPPEIAARDTAELLDPGDYFNPEVRQNLKQNYAGLFNV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RTQFYDNFNKFLAYKKSKDTAKTAQLLDENYKLSVELSEYKQVIFDILSPLTEQAESELL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ADEPLKDQIMAMRKMSGTVQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCC DEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQAMSEAYEYGLSVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKKFLLFGALVGALLLSSCSGGSKKQTVSSESTEELDDASKVINYYHMSLAVLRHVANA CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC KDINAVLGYMEQTGKVPEVDPIAPPEIAARDTAELLDPGDYFNPEVRQNLKQNYAGLFNV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RTQFYDNFNKFLAYKKSKDTAKTAQLLDENYKLSVELSEYKQVIFDILSPLTEQAESELL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ADEPLKDQIMAMRKMSGTVQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCC DEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQAMSEAYEYGLSVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA